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Transcriptomic alterations in the sweet orange vasculature correlate with growth repression induced by a variant of citrus tristeza virus

Vicken Aknadibossian , Jose C Huguet-Tapia , Victor Golyaev , Mikhail M. Pooggin , Svetlana Y Folimonova
Frontiers in Microbiology, 2023, 14, pp.1162613. ⟨10.3389/fmicb.2023.1162613⟩
Article dans une revue hal-04176634v1

MISIS-2: A bioinformatics tool for in-depth analysis of small RNAs and representation of consensus master genome in viral quasispecies

Jonathan Seguin , Patricia Otten , Loic Baerlocher , Laurent Farinelli , Mikhail Pooggin
Journal of Virological Methods, 2016, 233, pp.37-40. ⟨10.1016/j.jviromet.2016.03.005⟩
Article dans une revue hal-02636856v1
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Ribosome Shunting, Polycistronic Translation, and Evasion of Antiviral Defenses in Plant Pararetroviruses and Beyond

Mikhail M. Pooggin , Lyuba Ryabova
Frontiers in Microbiology, 2018, 9, pp.644. ⟨10.3389/fmicb.2018.00644⟩
Article dans une revue hal-02289592v1

Evasion of Short Interfering RNA-Directed Antiviral Silencing in Musa acuminata Persistently Infected with Six Distinct Banana Streak Pararetroviruses

Rajendran Rajeswaran , Jonathan Seguin , Matthieu Chabannes , Pierre-Olivier Duroy , Nathalie Laboureau , et al.
Journal of Virology, 2014, 88 (19), pp.11516-11528. ⟨10.1128/JVI.01496-14⟩
Article dans une revue hal-02637162v1
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Identification and Molecular Characterization of a Novel Hordeivirus Associated With Yellow Mosaic Disease of Privet (Ligustrum vulgare) in Europe

Jean-Sébastien Reynard , Silvia Turco , Justine Brodard , Isabelle Kellenberger , François Maclot , et al.
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.723350⟩
Article dans une revue hal-03408043v1
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Cannabis Virome Reconstruction and Antiviral RNAi Characterization through Small RNA Sequencing

Niccolo Miotti , Natalia Sukhikh , Nathalie Laboureau , Paola Casati , Mikhail M Pooggin
Plants, 2023, 12 (23), pp.3925. ⟨10.3390/plants12233925⟩
Article dans une revue hal-04531033v1

High Throughput Sequencing of siRNAs and virus diagnostic: does sequence analysis strategies really matter? Results of an international proficiency testing

Sébastien Massart , Ian Adams , Michela Chiumenti , Kris de Jonghe , Igor Koloniuk , et al.
16. Rencontres de Virologie Végétale (RVV 2017), Jan 2017, Aussois, France. 2017
Poster de conférence hal-01604506v1

Translation reinitiation and leaky scanning in plant viruses

La Ryabova , Mm Pooggin , T. Hohn
Virus research., 2006, 119, pp.52-62
Article dans une revue hal-00093222v1

Mechanism of ribosome shunting in Rice tungro bacilliform pararetrovirus

Mm Pooggin , La Ryabova , X. He , J. Futterer , T. Hohn
RNA (New York, N.Y.), 2006, 12, pp.841-850
Article dans une revue hal-00093210v1
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A newly emerging alphasatellite affects banana bunchy top virus replication, transcription, siRNA production and transmission by aphids

Valentin Guyot , Rajendran Rajeswaran , Huong Cam Chu , Chockalingam Karthikeyan , Nathalie Laboureau , et al.
PLoS Pathogens, 2022, 18 (4), pp.e1010448. ⟨10.1371/journal.ppat.1010448⟩
Article dans une revue pasteur-03659357v1
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Evidence for Dicot Plants as Alternative Hosts of Banana Bunchy Top Virus and Its Alphasatellites in South-East Asia

Valentin Guyot , Ngoc-Sam Ly , Tien-Dung Trieu , Oudomphone Insisiengmay , Ting Zhang , et al.
Pathogens, 2023, 12 (11), pp.1289. ⟨10.3390/pathogens12111289⟩
Article dans une revue hal-04532281v1
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Small RNA-Omics for Plant Virus Identification, Virome Reconstruction, and Antiviral Defense Characterization

Mikhail Pooggin
Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.02779⟩
Article dans une revue hal-02624505v1

Role of Small RNAs in Virus-Host Interaction

Mikhail Pooggin
Plant-Virus Interactions : Molecular Biology, Intra- and Intercellular Transport, Chapter 6, Springer International Publishing, 189 p., 2016, 978-3-319-25487-6. ⟨10.1007/978-3-319-25489-0_6⟩
Chapitre d'ouvrage hal-02798767v1
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Small RNA-Omics for Virome Reconstruction and Antiviral Defense Characterization in Mixed Infections of Cultivated Solanum Plants

Silvia Turco , Victor Golyaev , Jonathan Seguin , Céline Gilli , Laurent Farinelli , et al.
Molecular Plant-Microbe Interactions, 2018, 31 (7), pp.707-723. ⟨10.1094/MPMI-12-17-0301-R⟩
Article dans une revue hal-02628890v1
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A new genus of alphasatellites associated with banana bunchy top virus in Southeast Asia

Valentin Guyot , Tien-Dung Trieu , Oudomphone Insisiengmay , Ting Zhang , Marie-Line Iskra-Caruana , et al.
Virus Evolution, 2023, 10 (1), pp.1-18. ⟨10.1093/ve/vead076⟩
Article dans une revue hal-04531417v1

Viral protein suppresses oxidative burst and salicylic acid-dependent autophagy and facilitates bacterial growth on virus-infected plants

Anna S. Zvereva , Victor Golyaev , Silvia Turco , Ekaterina G. Gubaeva , Rajendran Rajeswaran , et al.
New Phytologist, 2016, 211 (3), pp.1020-1034. ⟨10.1111/nph.13967⟩
Article dans une revue hal-02639310v1

Specific impact of tobamovirus infection on the Arabidopsis small RNA profile

Q. Hu , J. Hollunder , A. Niehl , C.J Kørner , D. Gereige , et al.
PLoS ONE, 2011, 6 (5), pp.e19549. ⟨10.1371/journal.pone.0019549⟩
Article dans une revue hal-00595540v1
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Plant virome reconstruction and antiviral RNAi characterization by deep sequencing of small RNAs from dried leaves

Victor Golyaev , Thierry T. Candresse , Frank Rabenstein , Mikhail Pooggin
Scientific Reports, 2019, 9, ⟨10.1038/s41598-019-55547-3⟩
Article dans une revue hal-02628261v1
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Transcriptome and small RNAome profiling uncovers how a recombinant begomovirus evades RDRγ-mediated silencing of viral genes and outcompetes its parental virus in mixed infection

Margaux Jammes , Victor Golyaev , Alejandro Fuentes , Nathalie Laboureau , Cica Urbino , et al.
PLoS Pathogens, 2024, 20 (1), pp.e1011941. ⟨10.1371/journal.ppat.1011941⟩
Article dans une revue hal-04531146v1
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Topical Application of Double-Stranded RNA Targeting 2b and CP Genes of Cucumber mosaic virus Protects Plants against Local and Systemic Viral Infection

Maria Holeva , Athanasios Sklavounos , Rajendran Rajeswaran , Mikhail M. Pooggin , Andreas Voloudakis
Plants, 2021, 10 (5), pp.963. ⟨10.3390/plants10050963⟩
Article dans une revue hal-03747778v1
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Ortervirales: New Virus Order Unifying Five Families of Reverse-Transcribing Viruses

Mart Krupovic , Jonas Blomberg , John Coffin , Indranil Dasgupta , Hung Fan , et al.
Journal of Virology, 2018, 92 (12), pp.e00515-18. ⟨10.1128/JVI.00515-18⟩
Article dans une revue pasteur-01977336v1

Viruses too divergent for detection by Blast searches: a novel higher order viral taxon in viral metagenomes from the Kerguelen islands and southwest France

Laurence Svanella-Dumas , Yuxin Ma , Armelle Marais , Sébastien Theil , Chantal Faure , et al.
17. Rencontres de Virologie Végétale (RVV 2019), Jan 2019, Aussois, France
Communication dans un congrès hal-02737924v1

Interactions of Rice Tungro Bacilliform Pararetrovirus and Its Protein P4 with Plant RNA-Silencing Machinery

Rajendran Rajeswaran , Victor Golyaev , Jonathan Seguin , Anna S. Zvereva , Laurent Farinelli , et al.
Molecular Plant-Microbe Interactions, 2014, 27 (12), pp.1370-1378. ⟨10.1094/MPMI-07-14-0201-R⟩
Article dans une revue hal-02637328v1

MISIS: A bioinformatics tool to view and analyze maps of small RNAs derived from viruses and genomic loci generating multiple small RNAs

Jonathan Seguin , Patricia Otten , Loic Baerlocher , Laurent Farinelli , Mikhail Pooggin
Journal of Virological Methods, 2014, 195, pp.120-122. ⟨10.1016/j.jviromet.2013.10.013⟩
Article dans une revue hal-02641307v1
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De Novo Reconstruction of Consensus Master Genomes of Plant RNA and DNA Viruses from siRNAs

Jonathan Seguin , Rajendran Rajeswaran , Nachelli Malpica-Lopez , Robert R. Martin , Kristin Kasschau , et al.
PLoS ONE, 2014, 9 (2), ⟨10.1371/journal.pone.0088513⟩
Article dans une revue hal-02634925v1

Field Trial and Molecular Characterization of RNAi-Transgenic Tomato Plants That Exhibit Resistance to Tomato Yellow Leaf Curl Geminivirus

Alejandro Fuentes , Natacha Carlos , Yoslaine Ruiz , Danay Callard , Yadira Sanchez , et al.
Molecular Plant-Microbe Interactions, 2016, 29 (3), pp.197-209. ⟨10.1094/MPMI-08-15-0181-R⟩
Article dans une revue hal-02639315v1
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Cauliflower mosaic virus protein P6‐TAV plays a major role in alteration of aphid vector feeding behaviour but not performance on infected Arabidopsis

Quentin Chesnais , Maxime Verdier , Myriam Burckbuchler , Véronique Brault , Mikhail M. Pooggin , et al.
Molecular Plant Pathology, 2021, 22 (8), pp.911-920. ⟨10.1111/mpp.13069⟩
Article dans une revue hal-03239295v1

RNAi-mediated resistance to viruses: a critical assessment of methodologies

Mikhail Pooggin
Current Opinion in Virology, 2017, 26, pp.28-35. ⟨10.1016/j.coviro.2017.07.010⟩
Article dans une revue hal-02625206v1
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ICTV Virus Taxonomy Profile: Caulimoviridae

Pierre-Yves Teycheney , Andrew D W Geering , Idranil Dasgupta , Roger Hull , Jan F Kreuze , et al.
Journal of General Virology, 2020, 101 (10), pp.1025 - 1026. ⟨10.1099/jgv.0.001497⟩
Article dans une revue hal-03025267v1

Short ORF-dependent ribosome shunting operates in an RNA picorna-like virus and a DNA pararetrovirus that cause rice tungro disease

M.M. Pooggin , R. Rajeswaran , M. Schepetilnikov , L. Ryabova
PLoS Pathogens, 2012, 8 (3), pp.e1002568. ⟨10.1371/journal.ppat.1002568⟩
Article dans une revue hal-00680362v1