Michaël Sdika
91
Documents
Présentation
### **Selected Publications:**
* [HAL](https://hal.science/hal-04110698) Valentine Wargnier-Dauchelle , Thomas Grenier , Françoise Durand-Dubief , François Cotton , Michaël **Sdika**. A Weakly Supervised Gradient Attribution Constraint for Interpretable Classification and Anomaly Detection, *IEEE Trransactions on Medical Imaging* 2023 https://dx.doi.org/10.1109/TMI.2023.3282789
* [HAL](https://hal.science/hal-02275956) Pierre-Antoine Ganaye, Michaël **Sdika**, Bill Triggs, Hugues Benoit-Cattin. Removing Segmentation Inconsistencies with Semi-Supervised Non-Adjacency Constraint. *Medical Image Analysis*, Elsevier, 2019, 58, pp.101551. [⟨10.1016/j.media.2019.101551⟩](https://dx.doi.org/10.1016/j.media.2019.101551).
* [HAL]( https://hal.science/hal-01956237) Michaël **Sdika**. Diffeomorphic B-Spline Vector Fields With a Tractable Set of Inequalities. *Mathematics of Computation*, American Mathematical Society, 2019, 88 (320), pp.2827--2856. [⟨10.1090/mcom/3419⟩](https://dx.doi.org/10.1090/mcom/3419).
* [HAL](https://hal.science/hal-01974104v2) Michaël **Sdika**, Laure Alston, David Rousseau, Jacques Guyotat, Laurent Mahieu-Williame, et al.. Repetitive Motion Compensation for Real Time Intraoperative Video Processing. *Medical Image Analysis*, Elsevier, 2019, 53, pp.1-10. [⟨10.1016/j.media.2018.12.005⟩](https://dx.doi.org/10.1016/j.media.2018.12.005).
* [HAL](https://hal.science/hal-01690881) Charley Gros, ..... Michaël **Sdika**, . Automatic spinal cord localization, robust to MRI contrasts using global curve optimization. *Medical Image Analysis*, Elsevier, 2018, 44, pp.215-227. [⟨10.1016/j.media.2017.12.001⟩](https://dx.doi.org/10.1016/j.media.2017.12.001).
Publications
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Robust Unsupervised Image to Template Registration Without Image Similarity LossMedical Image Learning with Limited and Noisy Data, Second International Workshop, MILLanD 2023, Held in Conjunction with MICCAI 2023, Vancouver, Proceedings, Oct 2023, Vancouver, Canada
Communication dans un congrès
hal-04183379v1
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Intraoperative optical imaging for neurosurgery guidanceJournées de la Recherche en Imagerie et Technologies pour la Santé (RITS ) 2022, May 2022, Brest, France
Communication dans un congrès
hal-03700652v1
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Comparison of intraoperative functional brain maps obtained with RGB imaging with preoperative functional magnetic resonance Imaging maps: a task-based and resting-state studyClinical Biophotonics II, Apr 2022, Strasbourg, France. pp.14, ⟨10.1117/12.2621507⟩
Communication dans un congrès
hal-03687220v1
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Design of brain simulating liquid and numeric phantoms for evaluating hemodynamic changes in intraoperative functional brain mapping studiesClinical Biophotonics II, Apr 2022, Strasbourg, France. pp.37, ⟨10.1117/12.2621235⟩
Communication dans un congrès
hal-03687207v1
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A More Interpretable Classifier for Multiple SclerosisInternational Symposium on Biomedical Imaging (ISBI), Apr 2021, Nice, France. ⟨10.1109/ISBI48211.2021.9434074⟩
Communication dans un congrès
hal-03212945v1
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Application of Deep Leaning Model for Quality Control of Short-echo 7T MRSI with Various Disease Types2021 ISMRM & SMRT Annual Meeting, May 2021, virtual Vancouver, Canada
Communication dans un congrès
hal-03519714v1
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Un Classifieur plus Interprétable pour la SEPCongrès Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
Communication dans un congrès
hal-03212961v1
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Intraoperative functional and metabolic brain mapping using hyperspectral imagingPhotonic west, Feb 2020, San Francisco, United States. pp.11, ⟨10.1117/12.2545968⟩
Communication dans un congrès
hal-02539551v1
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Segmentation of neonates cerebral ventricles with 2D CNN in 3D US data: suitable training-set size and data augmentation strategies2019 IEEE International Ultrasonics Symposium (IUS), Oct 2019, Glasgow, United Kingdom. pp.2122-2125, ⟨10.1109/ULTSYM.2019.8925799⟩
Communication dans un congrès
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MR SPECTROSCOPY ARTIFACT REMOVAL WITH U-NET CONVOLUTIONAL NEURAL NETWORK27th Annual meeting of the ISMRM, May 2019, Montreal, Canada
Communication dans un congrès
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MRI-based radiomic to predict lipomatous soft tissue tumors malignancy27th Annual meeting of the ISMRM, May 2019, Montréal, Canada
Communication dans un congrès
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Pixel-wise modied Beer-Lambert model for intraoperative functional brain mappingEuropean Conferences on Biomedical Optics, Jun 2019, Munich, Germany
Communication dans un congrès
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Semi-supervised learning for segmentation under semantic constraintMICCAI, Sep 2018, Grenada, Spain
Communication dans un congrès
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Automatic Segmentation of the Cerebral Ventricle in Neonates Using Deep Learning with 3D Reconstructed Freehand Ultrasound Imaging2018 IEEE International Ultrasonics Symposium (IUS), Oct 2018, Kobe, Japan. pp.1-4, ⟨10.1109/ULTSYM.2018.8580214⟩
Communication dans un congrès
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Magnetic Resonance Spectroscopy Quantification using Deep LearningMICCAI, Oct 2018, Grenada, Spain
Communication dans un congrès
hal-01904617v1
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Towards handling artefacts in Convolutional Neural Networks-based MRS quantificationISMRM MRS Workshop, Oct 2018, Utrecht, Netherlands
Communication dans un congrès
hal-01904680v1
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Neuroimagerie fonctionnelle multispectraleOPTDIAG, 2018, Paris, Unknown Region
Communication dans un congrès
hal-01902495v1
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MRI-based radiomic to assess lipomatous soft tissue tumors malignancy: a pilot studyInternational Society of Magnetic Resonance in Medicine and European Society of Magnetic Resonance in Medicine and Biology joint Annual Meeting, Jun 2018, Paris, France
Communication dans un congrès
hal-01921659v1
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Towards Integrating Spatial Localization in Convolutional Neural Networks for Brain Image Segmentation2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018), Apr 2018, Washington, United States. ⟨10.1109/ISBI.2018.8363652⟩
Communication dans un congrès
hal-01812045v1
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Automatic Detection of the Spinal Cord Centerline using Machine Learning and Global Nonlinear OptimizationRecherche en Imagerie et Technologies pour la Santé - RITS 2017, Mar 2017, Lyon, France
Communication dans un congrès
hal-01721389v1
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OptiC: Robust and Automatic Spinal Cord Localization on a Large Variety of MRI Data Using a Distance Transform Based Global OptimizationMedical Image Computing and Computer-Assisted Intervention − MICCAI 2017, Sep 2017, Québec, Canada. pp.712-719, ⟨10.1007/978-3-319-66185-8_80⟩
Communication dans un congrès
hal-01713965v1
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3D MRI Segmentation of muscle through 2D multi-label propagation at 7T34th Annual Scientific Meeting of the European Society of Magnetic Resonance in Medicine and Biology, European Society of Magnetic Resonance in Medicine and Biology, Oct 2017, Barcelone, Spain
Communication dans un congrès
hal-04077604v1
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Robust real time motion compensation for intraoperative video processing during neurosurgeryIEEE 13th International Symposium on Biomedical Imaging (ISBI 2016), Apr 2016, Prague, Czech Republic. ⟨10.1109/ISBI.2016.7493445⟩
Communication dans un congrès
hal-01451713v1
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Improving the spatial resolution and SNR of rat brain T2-weighted MR images: application of a super-resolution methodISMRM 23rd Annual Meeting & Exhibition, May 2015, Toronto, Canada
Communication dans un congrès
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Multiple labels point-set registration2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), Apr 2015, New-York, United States. pp.609 - 612, ⟨10.1109/ISBI.2015.7163947⟩
Communication dans un congrès
hal-01272177v1
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Amélioration de résolution spatiale et SNR d’images cérébrales pondérées T2 de rat : application de la super-résolution2ème Congrès de la SFRMBM, Mar 2015, Grenoble, France
Communication dans un congrès
hal-01288527v1
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Validation of a 2D Spinal Cord Probabilistic Atlas. Application to FA Measurement and VBM Study of the GM Atrophy Occurring with AgeISMRM-ESMRMB Annual Meeting 2014, May 2014, Milan, France
Communication dans un congrès
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Atlas of White-Matter Tracts in the Human Spinal CordISMRM-ESMRMB Annual Meeting 2014, May 2014, Milan, Italy
Communication dans un congrès
hal-01117699v1
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MNI-Poly-AMU Average Anatomical Template for Automatic Spinal Cord MeasurementsISMRM-ESMRMB Annual Meeting 2014, May 2014, Milan, Italy
Communication dans un congrès
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Liver perfusion quantification with MR-DCE imaging at 3.0 T for liver fibrosis assessment in patients with chronic liver diseasesISMRM 21st Annual Meeting & Exhibition, Apr 2013, Salt-Lake City, United States. pp.3911
Communication dans un congrès
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Démonstrateur en imagerie à vocation diagnostique dans le cadre de l'AVC4èmes Journées Démonstrateurs 2013, Jun 2013, Angers, France
Communication dans un congrès
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Multi Atlas Segmentation of Rat Leg Muscles20th Annual meeting of the ISMRM, 2011, Montreal, Canada. pp.2562
Communication dans un congrès
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Towards a biochemical and structure specific quantitative analysis of the mouse brain using Magnetic Resonance Spectroscopic Imaging at 11.7TJournées Thématiques GDR "Imagerie in vivo" (IMAGIV), 2011, Paris, Unknown Region
Communication dans un congrès
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Optimal Recombination of Multi-Coils CSI Data using Image Based Sensitivity Map20th Annual meeting of the ISMRM, 2011, Montreal, Canada. pp.3478
Communication dans un congrès
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Vascular Alterations and Recruitment in Spinal Cord Injury Revealed by Multislice Arterial Spin Labeling (ASL) Perfusion ImagingISMRM-ESMRMB Joint Annual Meeting, 2011, Stockholm, Sweden. pp.5092
Communication dans un congrès
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Short Echo Time H1 Chemical Shift Imaging data quantification in the mouse brain at 11.7T using a constrained parametric macromolecular modelISMRM-ESMRMB Joint Annual Meeting, 2010, Stockholm, Sweden
Communication dans un congrès
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A Fully Automated White Matter/Gray Matter Segmentation of Mice Spinal Cord on DTI ImagesISMRM-ESMRMB Joint Annual Meeting, 2010, Stockholm, Sweden. pp.442
Communication dans un congrès
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Segmentation of the Structure of the Mouse Spinal Cord on DTI imagesISMRM-ESMRMB Joint Annual Meeting, 2010, Stockholm, Sweden. pp.5115
Communication dans un congrès
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Quantitative assessment of the brain macromolecular content in a mouse model of neuro-inflammation from chemical shift imaging data at 11.7TESMRMB, 2009, Antalya, Turkey. pp.39
Communication dans un congrès
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Towards structure specific macromolecular content of mouse brain from Chemical Shift Imaging data at 11.7TISMRM, 2009, Hawai, United States. pp.3293
Communication dans un congrès
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Effective Voigt model estimation using multiple random starting values and parameter bounds settings for in vivo hepatic 1H Magnetic Resonance Spectroscopy dataIEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008, Paris, France. pp.1529-1532, ⟨10.1109/ISBI.2008.4541300⟩
Communication dans un congrès
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Regional Estimation of T1 Metabolite Relaxation using 2D MRSI and a Bootstrap Approach at 1.5TInt. Soc. Magnetic Resonance in Medicine, 14th Scientific Meeting and Exhibition, 2006, Seattle, Washington, USA, Unknown Region
Communication dans un congrès
hal-01879435v1
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Semi-Parametric estimation in In vivo MR SpectroscopyProRISC, IEEE Benelux, 2005, Veldhoven, The, Netherlands. pp.658-667
Communication dans un congrès
hal-01879442v1
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PhotoMole: retrieval from a database of natural imagesCVPR'05 - IEEE Computer Society Conference on Computer Vision and Pattern Recognition, Jun 2005, San Diego, United States. pp.1-4
Communication dans un congrès
hal-01902510v1
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Procédé de traitement d'un tissu biologique vivant avec auto-calibrageFrance, N° de brevet: 2103802. 2021
Brevet
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Simulation de la dynamique du système de déplacements urbains : une plate-forme de modélisation2003
Autre publication scientifique
halshs-00093625v1
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The Impact of Hardware Variability on Applications Packaged with Docker and Guix: a Case Study in Neuroimaging2024
Pré-publication, Document de travail
hal-04480308v1
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Hybrid single-pixel camera for dynamic hyperspectral imaging2023
Pré-publication, Document de travail
hal-04310110v2
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