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Human Skin Microbiota: High Diversity of DNA Viruses Identified on the Human Skin by High Throughput Sequencing

 Vincent Foulongne , Virginie Sauvage , Charles Hébert , Olivier Dereure , Justine Cheval , et al.
PLoS ONE, 2012, 7 (6), pp.e38499. ⟨10.1371/journal.pone.0038499⟩
Article dans une revue hal-02646448v1
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Rouxiella chamberiensis gen. nov., sp. nov., a new Enterobacteriaceae isolated from parenteral nutrition bags.

 Anne Le Fleche-Mateos , Marion Levast , Fabienne Lomprez , Yolande Arnoux , Clément Andonian , et al.
International Journal of Systematic and Evolutionary Microbiology, 2015, ⟨10.1099/ijs.0.000179⟩
Article dans une revue pasteur-01134699v1
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Identification of the first human gyrovirus, a virus related to chicken anemia virus

 Virginie V. Sauvage , Justine J. Cheval , Vincent V. Foulongne , Meriadeg M. Ar Gouilh , Kevin K. Pariente , et al.
Journal of General Virology, 2011, 85 (15), pp.7948-7950. ⟨10.1128/JVI.00639-11⟩
Article dans une revue hal-01004065v1

SARS-CoV related Betacoronavirus and diverse Alphacoronavirus members found in western old-world

 Meriadeg Ar Gouilh , Sébastien Puechmaille , Laure Diancourt , Mathias Vandenbogaert , Jordi Serra-Cobo , et al.
Virology, 2018, 517, pp.88 - 97. ⟨10.1016/j.virol.2018.01.014⟩
Article dans une revue hal-01872415v1
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Investigations into SARS-CoV-2 and other coronaviruses on mink farms in France late in the first year of the COVID-19 pandemic

 Marine Wasniewski , Franck Boué , Céline Richomme , Etienne Simon-Lorière , Sylvie Van Der Werf , et al.
PLoS ONE, 2023, 18 (8), pp.e0290444. ⟨10.1371/journal.pone.0290444⟩
Article dans une revue anses-04261882v1

Comparative molecular epidemiology of two closely related coronaviruses, bovine coronavirus (BCoV) and human coronavirus OC43 (HCoV-OC43), reveals a different evolutionary pattern

 Nathalie Kin , Fabien Miszczak , Laure Diancourt , Valérie Caro , François Moutou , et al.
Infection, Genetics and Evolution, 2016, 40, pp.186-191. ⟨10.1016/j.meegid.2016.03.006⟩
Article dans une revue hal-02367384v1
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A four-year survey (2011–2014) of West Nile virus infection in humans, mosquitoes and birds, including the 2012 meningoencephalitis outbreak in Tunisia

 Abir Monastiri , Badereddine Mechri , Ana Vázquez-González , Meriadeg Ar Gouilh , Mohamed Chakroun , et al.
Emerging microbes & infections, 2019, 7, pp.28. ⟨10.1038/s41426-018-0028-y⟩
Article dans une revue hal-02263672v1
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High prevalence of SARS-CoV-2 antibodies in pets from COVID-19+ households

 Matthieu Fritz , Béatrice Rosolen , Emilie Krafft , Pierre Becquart , Eric Elguero , et al.
One Health, 2020, 11, pp.100192. ⟨10.1016/j.onehlt.2020.100192⟩
Article dans une revue hal-03066754v1
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Genetic Drift, Purifying Selection and Vector Genotype Shape Dengue Virus Intra-host Genetic Diversity in Mosquitoes

 Sebastian Lequime , Albin Fontaine , Meriadeg M. Ar Gouilh , Isabelle Moltini-Conclois , Louis Lambrechts
PLoS Genetics, 2016, 12 (6), pp.e1006111. ⟨10.1371/journal.pgen.1006111⟩
Article dans une revue hal-01360140v1
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High Frequency of Viral Co-Detections in Acute Bronchiolitis

 Hortense Petat , Vincent Gajdos , François Angoulvant , Pierre-Olivier Vidalain , Sandrine Corbet , et al.
Viruses, 2021, 13 (6), pp.990. ⟨10.3390/v13060990⟩
Article dans une revue hal-03248651v1
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A Member of a New Picornaviridae Genus Is Shed in Pig Feces

 Virginie Sauvage , Meriadeg Ar Gouilh , Justine Cheval , Erika Muth , Kévin Pariente , et al.
Journal of Virology, 2012, 86 (18), ⟨10.1128/JVI.00046-12⟩
Article dans une revue hal-01191193v1
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Opinion paper: Severe Acute Respiratory Syndrome Coronavirus 2 and domestic animals: what relation?

 Elissa Khamisse , Charlotte Dunoyer , Meriadeg Ar Gouilh , Paul Brown , François Meurens , et al.
Animal, 2020, ⟨10.1017/S1751731120001639⟩
Article dans une revue anses-02878618v1

Avis de l'Anses relatif au rôle épidémiologique éventuel de certaines espèces animales dans le maintien et la propagation du virus SARS-CoV-2

 Sophie Le Poder , Paul Alun Brown , Meriadeg M. Ar Gouilh , François Meurens , Gilles Meyer , et al.
Autosaisine n°2020-SA-0059, Anses. 2020, 30 p
Rapport anses-04304225v1
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A unique Toxoplasma gondii haplotype accompanied the global expansion of cats

 Lokman Galal , Frédéric Ariey , Meriadeg Ar Gouilh , Marie-Laure Dardé , Azra Hamidović , et al.
Nature Communications, 2022, 13 (1), pp.5778. ⟨10.1038/s41467-022-33556-7⟩
Article dans une revue hal-03863411v1
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Human polyomavirus related to African green monkey lymphotropic polyomavirus

 Virginie Sauvage , Vincent Foulongne , Justine Cheval , Meriadeg Ar Gouilh , Kevin Pariente , et al.
Emerging Infectious Diseases, 2011, 17 (8), pp.1364-1370. ⟨10.3201/eid1708.110278⟩
Article dans une revue hal-02647943v1
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Whole-Genome Characterization of SARS-CoV-2 Reveals Simultaneous Circulation of Three Variants and a Putative Recombination (20B/20H) in Pets, Brazzaville, Republic of the Congo

 Léadisaelle Hosanna Lenguiya , Matthieu Fritz , Daphné de Riols de Fonclare , Sandrine Corbet , Pierre Becquart , et al.
Viruses, 2023, 15 (4), pp.933. ⟨10.3390/v15040933⟩
Article dans une revue hal-04120276v1
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High Frequency of Viral Co-Detections in Acute Bronchiolitis

 Hortense Petat , Vincent Gajdos , François Angoulvant , Pierre-Olivier Vidalain , Sandrine Corbet , et al.
Viruses, 2021, 13 (6), pp.990. ⟨10.3390/v13060990⟩
Article dans une revue hal-03941340v1
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The evolution of sensory divergence in the context of limited gene fl ow in the bumblebee bat

 Sebastien J. Puechmaille , Meriadeg Ar Gouilh , Piyathip Piyapan , Medhi Yokubol , Khin Mie Mie , et al.
Nature Communications, 2011, 2, pp.573. ⟨10.1038/ncomms1582⟩
Article dans une revue hal-00671094v1
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Identification of a novel neuropathogenic Theiler's murine encephalomyelitis virus

 Matthew R Buckwalter , Phan Thi Nga , Meriadeg Ar Gouilh , Laurence Fiette , Jean-François Bureau , et al.
Journal of Virology, 2011, 85 (14), pp.6893-905. ⟨10.1128/JVI.00274-11⟩
Article dans une revue pasteur-00830977v1
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First Complete Genome Sequence of a French Bovine coronavirus Strain

 Nathalie Kin , Pauline Guerard , Laure Diancourt , Valérie Caro , Astrid Vabret , et al.
Genome Announcements, 2017, 5 (21), pp.e00319-17. ⟨10.1128/genomeA.00319-17⟩
Article dans une revue hal-02366926v1
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Massive transient damage of the olfactory epithelium associated with infection of sustentacular cells by SARS-CoV-2 in golden Syrian hamsters

 Bertrand Bryche , Audrey St Albin , Séverine Murri , Sandra Lacôte , Coralie Pulido , et al.
Brain, Behavior, and Immunity, 2020, 89, pp.579-586. ⟨10.1016/j.bbi.2020.06.032⟩
Article dans une revue hal-02984344v1
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Identification of Alpha and Beta Coronavirus in Wildlife Species in France: Bats, Rodents, Rabbits, and Hedgehogs

 Elodie Monchatre-Leroy , Franck Boué , Jean-Marc Boucher , Camille Renault , François Moutou , et al.
Viruses, 2017, 9 (12), pp.364. ⟨10.3390/v9120364⟩
Article dans une revue hal-02146348v1

Fundamentals, Domains, and Diffusion of Disease Emergence: Tools and Strategies for a New Paradigm.

 Jean-Paul Gonzalez , Philippe Barbazan , François Baillon , Julien Capelle , Damien Chevallier , et al.
Tibayrenc, Michel. Encyclopedia of infectious diseases: Modern methodologies, John Wiley & Sons, pp.525-568, 2007
Chapitre d'ouvrage hal-00545580v1
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Genomic Analysis of 15 Human Coronaviruses OC43 (HCoV-OC43s) Circulating in France from 2001 to 2013 Reveals a High Intra-Specific Diversity with New Recombinant Genotypes

 Nathalie Kin , Fabien Miszczak , Wei Lin , Meriadeg Gouilh , Astrid Vabret
Viruses, 2015, 7 (5), pp.2358-2377. ⟨10.3390/v7052358⟩
Article dans une revue hal-02367389v1
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Hypoglycemic Toxins and Enteroviruses as Causes of Outbreaks of Acute Encephalitis-Like Syndrome in Children, Bac Giang Province, Northern Vietnam

 Nga Thi Phan , Meriadeg M. Ar Gouilh , Juliette Paireau , Loan Phuong , Justine J. Cheval , et al.
Emerging Infectious Diseases, 2018, 24 (8), pp.1435-1443. ⟨10.3201/eid2408.171004⟩
Article dans une revue hal-02146362v1

Massive introgressions of Toxoplasma gondii domestic alleles in the Americas coincide with the recent introduction of the domestic cat.

 Lokman Galal , Franck Prugnolle , Meriadeg Le Gouilh , Marie-Laure Dardé , Azra Hamidović , et al.
13th European Multicolloquium of Parasitology, Oct 2021, Belgrade, Serbia
Communication dans un congrès hal-03402110v1
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Projet Microbiosthme : Dynamique des microbiomes respiratoires des voies supérieures et inférieures, associée à l'asthme sévère du nourrisson

 A Michel , C Hassel , H Petat , M Leoz , Meriadeg Le Gouilh , et al.
Congrès de la FHU RESPIRE, Nov 2022, Forges-les-eaux, France
Poster de conférence hal-04117856v1

The Design and Implementation of the ECOVIR Project: A Primary Health Care Surveillance System to Strengthen Co-Detection of Respiratory Viruses in Normandy

 Hortense Petat , Matthieu Schuers , Meriadeg Ar Gouilh , Sandrine Corbet , Xavier Humbert , et al.
Methods and Protocols, 2022, 5 (6), pp.98. ⟨10.3390/mps5060098⟩
Article dans une revue hal-03993878v1
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Detection of SARS‐CoV‐2 in two cats during the second wave of the COVID‐19 pandemic in France

 Matthieu Fritz , Nicolas Nesi , Solène Denolly , Bertrand Boson , Vincent Legros , et al.
Veterinary Medicine and Science, 2021, pp.Online Version of Record before inclusion in an issue. ⟨10.1002/vms3.638⟩
Article dans une revue hal-03408737v1
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