Matthieu Falque

Documents

Publications

	MiniRead: A simple and inexpensive do‐it‐yourself device for multiple analyses of micro‐organism growth kinetics Matthieu Falque , Aurélie Bourgais , Fabrice Dumas , Mickaël de Carvalho , Célian Diblasi Yeast, 2024, ⟨10.1002/yea.3932⟩ Article dans une revue hal-04478675v1
	Quantitative modelling of fine-scale variations in the Arabidopsis thaliana crossover landscape Yu-Ming Hsu , Matthieu Falque , Olivier C Martin Quantitative Plant Biology, 2022, 3, pp.e3. ⟨10.1017/qpb.2021.17⟩ Article dans une revue hal-04362316v1
	Evidence of an additional center of apple domestication in Iran, with contributions from the Caucasian crab apple Malus orientalis Uglitzk. to the cultivated apple gene pool. Running head: Apple domestication in the Caucasus and Iran Hamid Bina , Hamed Yousefzadeh , Anthony Venon , Carine Remoué , Agnès Rousselet Molecular Ecology, In press, 31 (21), pp.5581-5601. ⟨10.1111/mec.16667⟩ Article dans une revue hal-03759285v1
	SeSAM: software for automatic construction of order-robust linkage maps Adrien Vidal , Franck Gauthier , Willy Rodrigez , Nadège Guiglielmoni , Damien Leroux BMC Bioinformatics, 2022, 23 (1), pp.499. ⟨10.1186/s12859-022-05045-7⟩ Article dans une revue hal-04086386v1
	Enhancing backcross programs through increased recombination Elise Tourrette , Matthieu Falque , Olivier C Martin Genetics Selection Evolution, 2021, 53 (1), pp.25. ⟨10.1186/s12711-021-00619-0⟩ Article dans une revue hal-04362373v1
	Large-scale geography survey provides insights into the colonization history of a major aphid pest on its cultivated apple host in Europe, North America and North Africa S.G. Olvera-Vazquez , C. Remoué , A. Venon , A. Rousselet , O. Grandcolas Peer Community Journal, 2021, 1, pp.e34. ⟨10.24072/pcjournal.26⟩ Article dans une revue hal-04287147v1
	Enhancing backcross programs through increased recombination Elise Tourrette , Matthieu Falque , Olivier C. Martin Genetics Selection Evolution, 2021, 53 (1), pp.25. ⟨10.1186/s12711-021-00619-0⟩ Article dans une revue hal-03168946v1
	Development of new genetic resources for faba bean (Vicia faba L.) breeding through the discovery of gene-based SNP markers and the construction of a high-density consensus map Estefania Carrillo Perdomo , A. Vidal , J. Kreplak , H. Duborjal , M. Leveugle Scientific Reports, 2020, 10 (1), pp.6790. ⟨10.1038/s41598-020-63664-7⟩ Article dans une revue hal-03672081v1
	CNVmap: a method and software to detect and map copy number variants from segregation data Matthieu Falque , Kamel Jebreen , Etienne Paux , Carsten Knaak , Sofiane Mezmouk Genetics, 2020, 214 (3), pp.561-576. ⟨10.1534/genetics.119.302881⟩ Article dans une revue hal-02570414v1
	Recombination suppression in heterozygotes for a pericentric inversion induces the interchromosomal effect on crossovers in Arabidopsis Pasquale Termolino , Matthieu Falque , Riccardo Aiese Cigliano , Gaetana Cremona , Rosa Paparo African journal of Plant Science, 2019, ⟨10.1111/tpj.14505⟩ Article dans une revue hal-02618157v1
	A reference genome for pea provides insight into legume genome evolution Jonathan J. Kreplak , Mohammed-Amin Madoui , Petr Cápal , Petr Novak , Karine Labadie Nature Genetics, 2019, 51 (9), pp.1411-1422. ⟨10.1038/s41588-019-0480-1⟩ Article dans une revue hal-02278272v1
	Water Deficit-Responsive QTLs for Cell Wall Degradability and Composition in Maize at Silage Stage Laëtitia Virlouvet , Fadi El Hage , Yves Griveau , Marie-Pierre Jacquemot , Emilie Gineau Frontiers in Plant Science, 2019, 10, ⟨10.3389/fpls.2019.00488⟩ Article dans une revue hal-04362423v1
	Assessing the Response of Small RNA Populations to Allopolyploidy Using Resynthesized Brassica napus Allotetraploids Paulina Martinez Palacios , Marie-Pierre Jacquemot , Marion Tapie , Agnes Rousselet , Mamoudou Diop Molecular Biology and Evolution, 2019, 36 (4), pp.709-726. ⟨10.1093/molbev/msz007⟩ Article dans une revue hal-02383691v1
	X-chromosome meiotic drive in Drosophila simulans: a QTL approach reveals the complex polygenic determinism of Paris drive suppression Cécile Courret , Pierre Gérard , David D. Ogereau , Matthieu Falque , Laurence Moreau Heredity, 2019, 122 (6), pp.906-915. ⟨10.1038/s41437-018-0163-1⟩ Article dans une revue hal-03818445v1
	Assessing by Modeling the Consequences of Increased Recombination in Recurrent Selection of Oryza sativa and Brassica rapa Elise Tourrette , Rex Bernardo , Matthieu Falque , Olivier C. Martin G3, 2019, 9 (12), pp.4169 - 4181. ⟨10.1534/g3.119.400545⟩ Article dans une revue hal-03111256v1
	Common gardens in teosintes reveal the establishment of a syndrome of adaptation to altitude Margaux-Alison Fustier , Natalia Martínez-Ainsworth , Jonás Aguirre-Liguori , Anthony Venon , Hélène Corti PLoS Genetics, 2019, 15 (12), pp.e1008512. ⟨10.1371/journal.pgen.1008512⟩ Article dans une revue hal-03007959v1
	Water deficit-responsive QTLs for cell wall degradability and composition in maize at silage stage Laetitia Virlouvet , Fadi El Hage , Yves Griveau , Marie Pierre Jacquemot , Emilie Gineau Frontiers in Plant Science, 2019, 10, pp.1-16. ⟨10.3389/fpls.2019.00488⟩ Article dans une revue hal-02618116v1
	High-throughput measurement of recombination rates and genetic interference in Saccharomyces cerevisiae Xavier Raffoux , Mickaël Bourge , Fabrice Dumas , Olivier C. Martin , Matthieu Falque Yeast (Chichester, England), 2018, 35 (6), pp.431-442. ⟨10.1002/yea.3315⟩ Article dans une revue hal-03818443v1
	Role of Cis, Trans, and Inbreeding Effects on Meiotic Recombination in Saccharomyces cerevisiae Xavier Raffoux , Mickaël Bourge , Fabrice Dumas , Olivier C. Martin , Matthieu Falque Genetics, 2018, 210 (4), pp.1213--1226. ⟨10.1534/genetics.118.301644⟩ Article dans une revue hal-02183493v1
	Linkage analysis and association mapping QTL detection models for hybrids between multiparental populations from two heterotic groups: application to biomass production in maize (Zea mays L.). Héloïse Giraud , Cyril Bauland , Matthieu Falque , Delphine Madur , Valerie Combes G3, 2017, 7 (11), pp.3649-3657. ⟨10.1534/g3.117.300121⟩ Article dans une revue hal-02617705v1
	Reciprocal genetics: identifying QTL for general and specific combining abilities in hybrids between multiparental populations from two maize (Zea mays L.) heterotic groups Héloïse Giraud , Cyril Bauland , Matthieu Falque , Delphine Madur , Valerie Combes Genetics, 2017, 207 (3), pp.1167-1180. ⟨10.1534/genetics.117.300305⟩ Article dans une revue hal-03818440v1
	Amplifying recombination genome-wide and reshaping crossover landscapes in Brassicas. Alexandre Pelé , Matthieu Falque , Gwenn Trotoux , Frederique Eber , Sylvie Negre PLoS Genetics, 2017, 13 (5), pp.e1006794. ⟨10.1371/journal.pgen.1006794⟩ Article dans une revue hal-01607280v1
	SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population Gilles Boutet , Susete Alves Carvalho , Matthieu Falque , Pierre Peterlongo , Emeline Lhuillier BMC Genomics, 2016, 17 (1), pp.121. ⟨10.1186/s12864-016-2447-2⟩ Article dans une revue hal-01275696v1
	Dearth of polymorphism associated with a sustained response to selection for flowering time in maize Eléonore Durand , Maud M. Tenaillon , Xavier Raffoux , Stéphanie Thepot , Matthieu Falque BMC Evolutionary Biology, 2015, 15, ⟨10.1186/s12862-015-0382-5⟩ Article dans une revue hal-02635204v1
	Recombination patterns in maize reveal limits to crossover homeostasis Gaganpreet K. Sidhu , Celestia Fang , Mischa A. Olson , Matthieu Falque , Olivier C. Martin Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (52), pp.15982-15987. ⟨10.1073/pnas.1514265112⟩ Article dans une revue hal-02637591v1
	Development of two major resources for pea genomics: the GenoPea 13.2K SNP Array and a high-density, high-resolution consensus genetic map. Nadim Tayeh , Christelle Aluome , Matthieu Falque , Françoise Jacquin , Anthony Klein Plant Journal, 2015, 84 (6), pp.1257-1273. ⟨10.1111/tpj.13070⟩ Article dans une revue hal-03818437v1
	Crossover rate between homologous chromosomes and interference are regulated by the addition of specific unpaired chromosomes in Brassica Maria Loreto Suay Llopis , Deshuang Zhang , Frederique Eber , Helene Jouy , Maryse Lodé-Taburel New Phytologist, 2014, 201 (2), pp.645-656. ⟨10.1111/nph.12534⟩ Article dans une revue hal-03818433v1
	Combined fluorescent and electron microscopic imaging unveils the specific properties of two classes of meiotic crossovers Lorinda K. Anderson , Leslie D. Lohmiller , Xiaomin Tang , D. Boyd Hammond , Lauren Javernick Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (37), pp.13415 - 13420. ⟨10.1073/pnas.1406846111⟩ Article dans une revue hal-02631115v1
	Linkage disequilibrium with linkage analysis of multiline crosses reveals different multiallelic QTL for hybrid performance in the flint and dent heterotic groups of maize. Héloïse Giraud , Christina Lehermeier , Eva Bauer , Matthieu M. Falque , Vincent Segura Genetics, 2014, 198 (4), pp.1717-1734. ⟨10.1534/genetics.114.169367⟩ Article dans une revue hal-02637060v1
	Crossover localisation is regulated by the neddylation posttranslational regulatory pathway Marina Tagliaro Jahns , Daniel Vezon , Aurélie Chambon , Lucie Pereira , Matthieu Falque PLoS Biology, 2014, 12 (8), ⟨10.1371/journal.pbio.1001930⟩ Article dans une revue hal-01204105v1
	Intraspecific variation of recombination rate in maize Eva Bauer , Matthieu M. Falque , Hildrun Walter , Cyril Bauland , Christian Camisan Genome Biology, 2013, 14 (9), ⟨10.1186/gb-2013-14-9-r103⟩ Article dans une revue hal-02649037v1
	Allopolyploidy has a moderate impact on restructuring at three contrasting transposable element insertion sites in resynthesized Brassica napus allotetraploids Veronique Sarilar , Paulina Martinez Palacios , Agnes Rousselet , Celine Ridel , Matthieu Falque New Phytologist, 2013, 198 (2), pp.593 - 604. ⟨10.1111/nph.12156⟩ Article dans une revue hal-01208632v1
	Contrasted patterns of crossover and non-crossover at Arabidopsis thaliana meiotic recombination hotspots Jan Drouaud , Hossein Khademian , Laurene Giraut , Vanessa Zanni , Sarah Bellalou PLoS Genetics, 2013, 9 (11), pp.1-15. ⟨10.1371/journal.pgen.1003922⟩ Article dans une revue hal-01204079v1
	Hot regions of noninterfering crossovers coexist with a nonuniformly interfering pathway in Arabidopsis thaliana Sayantani Basu-Roy , Franck Gauthier , Laurene Giraut , Christine Mezard , Matthieu Falque Genetics, 2013, 195 (3), pp.769-779. ⟨10.1534/genetics.113.155549⟩ Article dans une revue hal-01204088v1
	The ZmASR1 Protein Influences Branched-Chain Amino Acid Biosynthesis and Maintains Kernel Yield in Maize under Water-Limited Conditions Laetitia Virlouvet , Marie-Pierre Jacquemot , Denise Gerentes , Hélène Corti , Sophie Bouton Plant Physiology, 2011, 157 (2), pp.917-936. ⟨10.1104/pp.111.176818⟩ Article dans une revue hal-03818423v1
	Genome-Wide Crossover Distribution in Arabidopsis thaliana Meiosis Reveals Sex-Specific Patterns along Chromosomes Laurene Giraut , Matthieu Falque , Jan Drouaud , Lucie Pereira , Olivier C. Martin PLoS Genetics, 2011, 7 (11), ⟨10.1371/journal.pgen.1002354⟩ Article dans une revue hal-01190495v1
	A large maize (Zea mays L.) SNP genotyping array : development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome Martin W. Ganal , Gregor Durstewitz , Andreas Polley , Aurélie A. Berard , Edward S. Buckler PLoS ONE, 2011, 6 (12), ⟨10.1371/journal.pone.0028334⟩ Article dans une revue hal-02652466v1
	CODA (crossover distribution analyzer): quantitative characterization of crossover position patterns along chromosomes Franck Gauthier , Olivier C. Martin , Matthieu M. Falque BMC Bioinformatics, 2011, 12, ⟨10.1186/1471-2105-12-27⟩ Article dans une revue hal-02650452v1
	CODA (crossover distribution analyzer): quantitative characterization of crossover position patterns along chromosomes Franck Gauthier , Olivier Martin , Matthieu Falque BMC Bioinformatics, 2011, 12 (1), pp.27. ⟨10.1186/1471-2105-12-27⟩ Article dans une revue hal-03818416v1
	Deciphering the genetics of flowering time by an association study on candidate genes in bread wheat (Triticum aestivum L.) Michel Rousset , Isabelle I. Bonnin , Carine C. Remoue , Matthieu M. Falque , Bénédicte Rhoné TAG Theoretical and Applied Genetics, 2011, 123 (6), pp.907-926. ⟨10.1007/s00122-011-1636-2⟩ Article dans une revue hal-02645898v1
	The ZmASR1 protein influences branched-chain amino acid biosynthesis and maintains kernel yield in maize under water-limited conditions Laëtitia Virlouvet , Marie Pierre Jacquemot , Denise Gerentes , Helene Corti , Sophie Bouton Plant Physiology, 2011, 157 (2), pp.917-936. ⟨10.1104/pp.111.176818⟩ Article dans une revue hal-02647863v1
	QTLs and candidate genes for desiccation and abscisic acid content in maize kernels Valérie Capelle , Carine C. Remoue , Laurence Moreau , Agnes Reyss , Aline Mahé BMC Plant Biology, 2010, 10 (2), pp.1-22. ⟨10.1186/1471-2229-10-2⟩ Article dans une revue hal-02662839v1
	Genetic map construction and quantitative trait loci (QTL) mapping for nitrogen use efficiency and its relationship with productivity and quality of the biennial crop Belgian endive (Cichorium intybus L.) Laurent Cassan , Laurence Moreau , Samuel Segouin , Annick Bellamy , Matthieu M. Falque Journal of Plant Physiology, 2010, 167 (15), pp.1253-1263. ⟨10.1016/j.jplph.2010.04.016⟩ Article dans une revue hal-02662433v1
	Recombination Proteins Mediate Meiotic Spatial Chromosome Organization and Pairing Aurora Storlazzi , Silvana Gargano , Gwenael Ruprich-Robert , Matthieu Falque , Michelle David Cell, 2010, 141 (1), pp.94-106. ⟨10.1016/j.cell.2010.02.041⟩ Article dans une revue hal-03818414v1
	Two Types of Meiotic Crossovers Coexist in Maize Matthieu Falque , Lorinda Anderson , Stephen Stack , Franck Gauthier , Olivier Martin The Plant cell, 2009, 21 (12), pp.3915-3925. ⟨10.1105/tpc.109.071514⟩ Article dans une revue hal-03818408v1
	Detailed Recombination Studies Along Chromosome 3B Provide New Insights on Crossover Distribution in Wheat ( Triticum aestivum L.) Cyrille Saintenac , Matthieu Falque , Olivier Martin , Etienne Paux , Catherine Feuillet Genetics, 2009, 181 (2), pp.393-403. ⟨10.1534/genetics.108.097469⟩ Article dans une revue hal-03818409v1
	Differential expression of candidate salt-tolerance genes in the halophyte Helianthus paradoxus and its glycophyte progenitors H. annuus and H. petiolaris (Asteraceae) Cécile Edelist , Xavier Raffoux , Matthieu Falque , Christine Dillmann , Delphine Sicard American Journal of Botany, 2009, 96 (10), pp.1830-1838. ⟨10.3732/ajb.0900067⟩ Article dans une revue hal-03818407v1
	Patterns of Recombination and MLH1 Foci Density Along Mouse Chromosomes: Modeling Effects of Interference and Obligate Chiasma M Falque , R Mercier , C Mézard , D de Vienne , O Martin Genetics, 2007, 176 (3), pp.1453-1467. ⟨10.1534/genetics.106.070235⟩ Article dans une revue hal-03818405v1
	Sex-Specific Crossover Distributions and Variations in Interference Level along Arabidopsis thaliana Chromosome 4 Jan Drouaud , Raphaël Mercier , Liudmila Chelysheva , Aurélie Bérard , Matthieu Falque PLoS Genetics, 2007, 3 (6), pp.1096-1107. ⟨10.1371/journal.pgen.0030106.eor⟩ Article dans une revue hal-01203942v1
	Maize Sh2 gene is constrained by natural selection but escaped domestication D. Manicacci , M. Falque , S. Le Guillou , B. Piégu , A.-M. Henry Journal of Evolutionary Biology, 2007, 20 (2), pp.503-516. ⟨10.1111/j.1420-9101.2006.01264.x⟩ Article dans une revue hal-03818406v1
	Molecular Evolution of the Opaque-2 Gene in Zea mays L. Anne-Marie Henry , Domenica Manicacci , Matthieu Falque , Catherine Damerval Journal of Molecular Evolution, 2005, 61 (4), pp.551-558. ⟨10.1007/s00239-005-0003-9⟩ Article dans une revue hal-03818398v1
	IRILmap: linkage map distance correction for intermated recombinant inbred lines/advanced recombinant inbred strains M. Falque Bioinformatics, 2005, 21 (16), pp.3441-3442. ⟨10.1093/bioinformatics/bti543⟩ Article dans une revue hal-03818395v1
	BioMercator: integrating genetic maps and QTL towards discovery of candidate genes A. Arcade , A. Labourdette , Matthieu Falque , Brigitte B. Mangin , Fabien F. Chardon Bioinformatics, 2005, 20 (14), pp.2324-2326. ⟨10.1093/bioinformatics/bth230⟩ Article dans une revue hal-02680717v1
	Linkage Mapping of 1454 New Maize Candidate Gene Loci Matthieu Falque , Laurent Décousset , Delphine Dervins , Anne-Marie Jacob , Johann Joets Genetics, 2005, 170 (4), pp.1957-1966. ⟨10.1534/genetics.104.040204⟩ Article dans une revue hal-03818397v1
	Genetic architecture of flowering time in maize as inferred from quantitative trait loci meta-analysis and synteny conservation with the rice genome Fabien F. Chardon , G. Virlon , L. Moreau , Matthieu Falque , Johann Joets Genetics, 2004, 168, pp.2169-2185. ⟨10.1534/genetics.104.032375⟩ Article dans une revue hal-02678548v1
	Maize cytokinin oxidase genes: differential expression and cloning of two new cDNAs Agnès Massonneau , Nicole Houba-Hérin , Claude Pethe , Catherine Madzak , Matthieu Falque Journal of Experimental Botany, 2004, 55 (408), pp.2549-2557. ⟨10.1093/jxb/erh274⟩ Article dans une revue hal-03818393v1
	Development and characterization of nine new microsatellite markers in Taraxacum (Asteraceae) Radim Vasut , Peter van Dijk , Matthieu Falque , Bohumil Travnicek , J. Hans de Jong Molecular Ecology Notes, 2004, 4 (4), pp.645-648. ⟨10.1111/j.1471-8286.2004.00760.x⟩ Article dans une revue hal-03818394v1
	ActionMap: a web-based software that automates loci assignments to framework maps G. Albini , Matthieu Falque , Johann Joets Nucleic Acids Research, 2003, 31 (13), pp.3815-3818. ⟨10.1093/nar/gkg594⟩ Article dans une revue hal-02680078v1
	Genetic structure of a population sample of apomictic dandelions R van der Hulst , T Mes , M Falque , P Stam , J den Nijs Heredity, 2003, 90 (4), pp.326-335. ⟨10.1038/sj.hdy.6800248⟩ Article dans une revue hal-03818390v1
	Towards a better understanding of the genetic and physiological basis for nitrogen use efficiency in maize Bertrand Hirel , P. Bertin , Isabelle I. Quillere , W. Bourdoncle , C. Attagnant Plant Physiology, 2001, 125 (mars), pp.1258-1270 Article dans une revue hal-02680034v1
	Crosses between sexual and apomictic dandelions (Taraxacum). The breakdown of apomixis P.J. van Dijk , I.C.Q. Tas , Matthieu Falque , T. Bakx-Schotman Heredity, 1999, 83, pp.715-721 Article dans une revue hal-02689021v1
	Isolation and characterization of microsatellites in Theobroma cacao L. C. Lanaud , A. Risterucci , I. Pieretti , M. Falque , A. Bouet Molecular Ecology, 1999, 8 (12), pp.2141-2143. ⟨10.1046/j.1365-294x.1999.00802.x⟩ Article dans une revue hal-03818382v1
	Development and characterization of microsatellite markers in the sexual-apomictic complex taraxacum officinale (dandelion) Matthieu Falque , Joost Keurentjes , J.M.T. Bakx-Schotman TAG Theoretical and Applied Genetics, 1998, 97, pp.283-292 Article dans une revue hal-02694840v1
	Comparison of two cacao (Theobroma cacao L.) clones for the effect of pollination intensity on fruit set and seed content M. Falque , C. Lesdalons , A. Eskes Sexual Plant Reproduction, 1996, 9 (4), pp.221-227. ⟨10.1007/BF02173102⟩ Article dans une revue hal-03818379v1
	A genetic linkage map of Theobroma cacao L. C. Lanaud , A. Risterucci , A. N'Goran , D. Clement , M. Flament TAG Theoretical and Applied Genetics, 1995, 91-91 (6-7), pp.987-993. ⟨10.1007/BF00223910⟩ Article dans une revue hal-03818377v1
	8. Influence de l'intensité de pollinisation sur les composantes du rendement de cacaoyer (Theobroma cacao L) M Falque Apidologie, 1995, 26 (5), pp.435-436 Article dans une revue hal-00891308v1
	Effect of pollination intensity on fruit and seed set in cacao (Theobroma cacao L.) Matthieu Falque , A. Vincent , Bernard Vaissière , A.B. Eskes Sexual Plant Reproduction, 1995, 8, pp.354-360 Article dans une revue hal-02713402v1
	Effect of pollination intensity on fruit and seed set in cacao (Theobroma cacao L.) Matthieu Falque , Antoine Vincent , Bernarde. Vaissiere , Albertusb. Eskes Sexual Plant Reproduction, 1995, 8 (6), ⟨10.1007/BF00243203⟩ Article dans une revue hal-03818376v1
	Pod and seed development and phenotype of the M1 plants after pollination and fertilization with irradiated pollen in cacao (Theobroma cacao L.) M. Falque Euphytica, 1994, 75 (1-2), pp.19-25. ⟨10.1007/BF00024527⟩ Article dans une revue hal-03818367v1
	Gamma-irradiation of cacao (Theobroma cacao L.) pollen: Effect on pollen grain viability, germination and mitosis and on fruit set M. Falque , A. Kodia , O. Sounigo , A. Eskes , A. Charrier Euphytica, 1992, 64 (3), pp.167-172. ⟨10.1007/BF00046045⟩ Article dans une revue hal-03818365v1
	A method for the study of CO2 exchanges in in vitro cultured Vitis rupestris plantlets Matthieu Falque , Daniel Compan , Rose Galzy Plant Cell, Tissue and Organ Culture, 1991, 27 (2), pp.175-181. ⟨10.1007/BF00041287⟩ Article dans une revue hal-03818362v1

	Towards bruchid resistance in pulses Estefania Carrillo Perdomo , Anthony Klein , Jonathan Kreplak , Chrystel Deulvot , Blandine Raffiot 9 th International Conference on Legume Genetics and Genomics (ICLGG 2019), Let's harness the potential of legumes, May 2019, Dijon, France Communication dans un congrès hal-02735741v1
	Bruchid resistance in pulses Estefania Carrillo Perdomo , Anthony Klein , Jonathan Kreplak , Chrystel Deulvot , Blandine Raffiot Transversal Symposium GIS BV, Investment for the future, Projects in plant Biology, Oct 2019, Paris, France Communication dans un congrès hal-02737235v1
	The Pisum Genus: Getting out of Pea Soup! Jonathan Kreplak , Mohammed-Amin Madoui , Karine Labadie , Grégoire Aubert , Petr Capal Plant and Animal Genome XXVI Conference, 2018, San Diego (CA), United States Communication dans un congrès hal-04331722v1
	Brassica allotriploids, a solution to deal with hampered meiotic recombination. Alexandre Pelé , Franz Boideau , Maryse Lodé-Taburel , Gwenn Trotoux , Frederique Eber 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2018, Saint-Malo, France Communication dans un congrès hal-03318165v1
	Heterosis in maize : intermated recombinant inbred lines and their immortalized F2 reveal QTLs with dominant effects but no overdominance Julie Fievet , Sarah Ben Sadoun , Tristan Mary , Stephane Nicolas , Matthieu Falque 59. Maize Genetics Conference, Mar 2017, Saint-Louis, United States Communication dans un congrès hal-01569899v1
	Neuf régions du génome sont impliquées dans la composition et la dégradabilité de la paroi dans des scénarios d'irrigation contrastés chez une population de maïs précoce Laetitia Virlouvet , Yves Griveau , Pascal Sartre , Serge Malavieille , Cyril Bauland 11es Journées du Réseau Français des parois, Jun 2017, Orléans, France Communication dans un congrès hal-02954968v1
	Le pois, espèce modèle ? Judith Burstin , Nadim N. Tayeh , Anthony Klein , Jonathan Kreplak , Françoise Jacquin 1. Rencontres Francophones sur les Légumineuses (RFL1), Institut National de la Recherche Agronomique (INRA). FRA., May 2016, Dijon, France Communication dans un congrès hal-02741352v1
	Pea in the genomic era Judith Burstin , Susete Alves Carvalho , Christelle Aluome , Nadim Tayeh , Anne-Lise Brochot Séminaire IFR AIB (Agrobiosciences, Interactions & Biodiversité), Feb 2015, Toulouse, France, 24 février 2015, France Communication dans un congrès hal-01536570v1

	Water deficit responsive QTLs for cell wall degradability and composition in maize at silage stage Laetitia Virlouvet , Fadi El Hage , Yves Griveau , Marie-Pierre Jacquemot , Emilie Gineau 3rd European Maize Meeting, 2019, Montpellier, France Poster de conférence hal-02955451v1
	Exploring the genetic basis of cell wall traits upon contrasted water regimes in maize. Laetitia Virlouvet , Yves Griveau , Marie-Pierre Jacquemot , Sébastien Beaubiat , Delphine Madur 60th Annual Maize Genetics Conference, Mar 2018, Saint-Malo, France. Poster de conférence hal-02955141v1

	Génétique et génomique du pois : what else ? Judith Burstin , Nadim Tayeh , Anthony Klein , Virginie Bourion , Jonathan Kreplak Société Nationale d'Horticulture de France, pp.33-37, 2016, 978-2-913793-16-3 Proceedings/Recueil des communications hal-02794125v1

	SNP Discovery and Genetic Mapping Using Genotyping by Sequencing of Whole Genome Genomic DNA from a Pea RIL Population Crop Breeding Santosh Kumar , Matthieu Falque , Gilles Boutet Crop Breeding - Bioinformatics and Preparing for Climate Change, Apple Academic Press, 2016, ⟨10.1201/9781315365084⟩ Chapitre d'ouvrage hal-04362517v1
	Genomics and Plant Breeding : Maize and Wheat P. Lea , J.-F. Briat , J.-F. Morot-Gaudry , Matthieu Falque , Bertrand Hirel Functional Plant Genomics, 1, CRC Press, 2013, ⟨10.1201/b10760⟩ Chapitre d'ouvrage hal-04362525v1
	Le maïs et le blé, céréales modèles pour la recherche en biologie intégrative et son application à la sélection Bertrand Hirel , Jacques Le Gouis , P. Perez , Matthieu Falque , Francis Quétier La génomique en biologie végétale, INRA Editions, 2004, Science Update, 2-7380-1167-5 Chapitre d'ouvrage hal-02832017v1
	Les marqueurs moléculaires Matthieu Falque , Sylvain Santoni La génomique en biologie végétale, INRA Editions, 2004, Science Update, 2-7380-1167-5 Chapitre d'ouvrage hal-02831011v1

	Utilisation d'associations entre polymorphismes du gène sh2 et des caractéristiques de qualité de la graine pour la sélection de plantes Doménica Manicacci , Dominique de Vienne , Mathilde M. Causse , Jean-Louis Prioul , Pascal Touzet N° de brevet: WO03016564. 2002 Brevet hal-02830701v1

	Large-scale geography survey provides insights into the colonization history of a major aphid pest on its cultivated apple host in Europe, North America and North Africa S Olvera-Vazquez , C Remoué , A Venon , A Rousselet , O Grandcolas 2021, pp.e34. ⟨10.24072/pci.evolbiol.100134⟩ Autre publication scientifique hal-03619354v1

	Evidence of an additional center of apple domestication in Iran, with contributions from the Caucasian crab apple Malus orientalis Running head: Apple domestication in the Caucasus Hamid Bina , Hamed Yousefzadeh , Anthony Venon , Carine Remoué , Agnès Rousselet 2021 Pré-publication, Document de travail hal-03365757v1

Matthieu Falque

Publications

MiniRead: A simple and inexpensive do‐it‐yourself device for multiple analyses of micro‐organism growth kinetics

Quantitative modelling of fine-scale variations in the Arabidopsis thaliana crossover landscape

Evidence of an additional center of apple domestication in Iran, with contributions from the Caucasian crab apple Malus orientalis Uglitzk. to the cultivated apple gene pool. Running head: Apple domestication in the Caucasus and Iran

SeSAM: software for automatic construction of order-robust linkage maps

Enhancing backcross programs through increased recombination

Large-scale geography survey provides insights into the colonization history of a major aphid pest on its cultivated apple host in Europe, North America and North Africa

Enhancing backcross programs through increased recombination

Development of new genetic resources for faba bean (Vicia faba L.) breeding through the discovery of gene-based SNP markers and the construction of a high-density consensus map

CNVmap: a method and software to detect and map copy number variants from segregation data

Recombination suppression in heterozygotes for a pericentric inversion induces the interchromosomal effect on crossovers in Arabidopsis

A reference genome for pea provides insight into legume genome evolution

Water Deficit-Responsive QTLs for Cell Wall Degradability and Composition in Maize at Silage Stage

Assessing the Response of Small RNA Populations to Allopolyploidy Using Resynthesized Brassica napus Allotetraploids

X-chromosome meiotic drive in Drosophila simulans: a QTL approach reveals the complex polygenic determinism of Paris drive suppression

Assessing by Modeling the Consequences of Increased Recombination in Recurrent Selection of Oryza sativa and Brassica rapa

Common gardens in teosintes reveal the establishment of a syndrome of adaptation to altitude

Water deficit-responsive QTLs for cell wall degradability and composition in maize at silage stage

High-throughput measurement of recombination rates and genetic interference in Saccharomyces cerevisiae

Role of Cis, Trans, and Inbreeding Effects on Meiotic Recombination in Saccharomyces cerevisiae

Linkage analysis and association mapping QTL detection models for hybrids between multiparental populations from two heterotic groups: application to biomass production in maize (Zea mays L.).

Reciprocal genetics: identifying QTL for general and specific combining abilities in hybrids between multiparental populations from two maize (Zea mays L.) heterotic groups

Amplifying recombination genome-wide and reshaping crossover landscapes in Brassicas.

SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population

Dearth of polymorphism associated with a sustained response to selection for flowering time in maize

Recombination patterns in maize reveal limits to crossover homeostasis

Development of two major resources for pea genomics: the GenoPea 13.2K SNP Array and a high-density, high-resolution consensus genetic map.

Crossover rate between homologous chromosomes and interference are regulated by the addition of specific unpaired chromosomes in Brassica

Combined fluorescent and electron microscopic imaging unveils the specific properties of two classes of meiotic crossovers

Linkage disequilibrium with linkage analysis of multiline crosses reveals different multiallelic QTL for hybrid performance in the flint and dent heterotic groups of maize.

Crossover localisation is regulated by the neddylation posttranslational regulatory pathway

Intraspecific variation of recombination rate in maize

Allopolyploidy has a moderate impact on restructuring at three contrasting transposable element insertion sites in resynthesized Brassica napus allotetraploids

Contrasted patterns of crossover and non-crossover at Arabidopsis thaliana meiotic recombination hotspots

Hot regions of noninterfering crossovers coexist with a nonuniformly interfering pathway in Arabidopsis thaliana

The ZmASR1 Protein Influences Branched-Chain Amino Acid Biosynthesis and Maintains Kernel Yield in Maize under Water-Limited Conditions

Genome-Wide Crossover Distribution in Arabidopsis thaliana Meiosis Reveals Sex-Specific Patterns along Chromosomes

A large maize (Zea mays L.) SNP genotyping array : development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome

CODA (crossover distribution analyzer): quantitative characterization of crossover position patterns along chromosomes

CODA (crossover distribution analyzer): quantitative characterization of crossover position patterns along chromosomes

Deciphering the genetics of flowering time by an association study on candidate genes in bread wheat (Triticum aestivum L.)

The ZmASR1 protein influences branched-chain amino acid biosynthesis and maintains kernel yield in maize under water-limited conditions

QTLs and candidate genes for desiccation and abscisic acid content in maize kernels

Genetic map construction and quantitative trait loci (QTL) mapping for nitrogen use efficiency and its relationship with productivity and quality of the biennial crop Belgian endive (Cichorium intybus L.)

Recombination Proteins Mediate Meiotic Spatial Chromosome Organization and Pairing

Two Types of Meiotic Crossovers Coexist in Maize

Detailed Recombination Studies Along Chromosome 3B Provide New Insights on Crossover Distribution in Wheat ( Triticum aestivum L.)

Differential expression of candidate salt-tolerance genes in the halophyte Helianthus paradoxus and its glycophyte progenitors H. annuus and H. petiolaris (Asteraceae)

Patterns of Recombination and MLH1 Foci Density Along Mouse Chromosomes: Modeling Effects of Interference and Obligate Chiasma

Sex-Specific Crossover Distributions and Variations in Interference Level along Arabidopsis thaliana Chromosome 4

Maize Sh2 gene is constrained by natural selection but escaped domestication

Molecular Evolution of the Opaque-2 Gene in Zea mays L.

IRILmap: linkage map distance correction for intermated recombinant inbred lines/advanced recombinant inbred strains

BioMercator: integrating genetic maps and QTL towards discovery of candidate genes

Linkage Mapping of 1454 New Maize Candidate Gene Loci

Genetic architecture of flowering time in maize as inferred from quantitative trait loci meta-analysis and synteny conservation with the rice genome

Maize cytokinin oxidase genes: differential expression and cloning of two new cDNAs

Development and characterization of nine new microsatellite markers in Taraxacum (Asteraceae)

ActionMap: a web-based software that automates loci assignments to framework maps

Genetic structure of a population sample of apomictic dandelions

Towards a better understanding of the genetic and physiological basis for nitrogen use efficiency in maize

Crosses between sexual and apomictic dandelions (Taraxacum). The breakdown of apomixis

Isolation and characterization of microsatellites in Theobroma cacao L.

Development and characterization of microsatellite markers in the sexual-apomictic complex taraxacum officinale (dandelion)

Comparison of two cacao (Theobroma cacao L.) clones for the effect of pollination intensity on fruit set and seed content

A genetic linkage map of Theobroma cacao L.

8. Influence de l'intensité de pollinisation sur les composantes du rendement de cacaoyer (Theobroma cacao L)

Effect of pollination intensity on fruit and seed set in cacao (Theobroma cacao L.)

Effect of pollination intensity on fruit and seed set in cacao (Theobroma cacao L.)

Pod and seed development and phenotype of the M1 plants after pollination and fertilization with irradiated pollen in cacao (Theobroma cacao L.)

Gamma-irradiation of cacao (Theobroma cacao L.) pollen: Effect on pollen grain viability, germination and mitosis and on fruit set

A method for the study of CO2 exchanges in in vitro cultured Vitis rupestris plantlets

Towards bruchid resistance in pulses

Bruchid resistance in pulses

The Pisum Genus: Getting out of Pea Soup!

Brassica allotriploids, a solution to deal with hampered meiotic recombination.

Heterosis in maize : intermated recombinant inbred lines and their immortalized F2 reveal QTLs with dominant effects but no overdominance

Neuf régions du génome sont impliquées dans la composition et la dégradabilité de la paroi dans des scénarios d'irrigation contrastés chez une population de maïs précoce

Le pois, espèce modèle ?