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Honey bees change the microbiota of pollen
Alberto Prado
,
Matthieu Barret
,
Bernard Vaissière
,
Gloria Torres-Cortes
Article dans une revue
hal-04044122v1
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Single seed microbiota: assembly and transmission from parent plant to seedling
Guillaume Chesneau
,
Béatrice Laroche
,
Anne Préveaux
,
Coralie Marais
,
Martial Briand
Article dans une revue
hal-03834661v1
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Defining Composition and Function of the Rhizosphere Microbiota of Barley Genotypes Exposed to Growth-Limiting Nitrogen Supplies
Rodrigo Alegria Terrazas
,
Senga Robertson-Albertyn
,
Aileen Mary Corral
,
Carmen Escudero-Martinez
,
Rumana Kapadia
Article dans une revue
hal-03889528v1
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Assessing the Cultivability of Bacteria and Fungi from Arable Crop Residues Using Metabarcoding Data as a Reference
Valerie Laval
,
Lydie Kerdraon
,
Matthieu Barret
,
Anne-Lise Liabot
,
Coralie Marais
Article dans une revue
hal-03368843v1
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Transmission of Seed and Soil Microbiota to Seedling
Aude Rochefort
,
Marie Simonin
,
Coralie Marais
,
Anne-Yvonne Guillerm-Erckelboudt
,
Matthieu Barret
Article dans une revue
hal-03299428v1
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Cross-linkage between bacterial taxonomy and gene functions: a study of metagenome-assembled genomes of Gut Microbiota in adult non-alcoholic fatty liver disease.
Clemence Canivet
,
Norma David
,
Helene Pailhoriès
,
Martial Briand
,
Cynthia Guy
Article dans une revue
hal-03138752v1
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Seed microbiota revealed by a large-scale meta-analysis including 50 plant species
Marie Simonin
,
Martial Briand
,
Guillaume Chesneau
,
Aude Rochefort
,
Coralie Marais
Article dans une revue
hal-03299446v1
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Maternal effects shape the seed mycobiome in Quercus petraea
Tania Fort
,
Charlie Pauvert
,
Amy Zanne
,
Otso Ovaskainen
,
Thomas Caignard
Article dans une revue
hal-03140262v1
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A rapid and simple method for assessing and representing genome sequence relatedness
Martial Briand
,
M Bouzid
,
G Hunault
,
M Legeay
,
Marion Fischer-Le Saux
Article dans une revue
hal-03560813v1
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Insect pollination: an ecological process involved in the assembly of the seed microbiota
Alberto Prado Farias
,
Brice Marolleau
,
Bernard Vaissière
,
Matthieu Barret
,
Gloria Torres-Cortés
Article dans une revue
hal-02623164v1
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Temporal dynamics of bacterial communities during seed development and maturation
Guillaume Chesneau
,
Gloria Torres-Cortes
,
Martial Briand
,
Armelle Darrasse
,
Anne Preveaux
Article dans une revue
hal-02972234v1
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rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing
Jean-Claude Ogier
,
Sylvie Pages
,
Maxime Galan
,
Matthieu Barret
,
Sophie Gaudriault
Article dans une revue
hal-02627663v1
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Crop Residues in Wheat-Oilseed Rape Rotation System: a Pivotal, Shifting Platform for Microbial Meetings
Lydie Kerdraon
,
Marie-Helene Balesdent
,
Matthieu Barret
,
Valerie Laval
,
Frederic Suffert
Article dans une revue
hal-02620072v1
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A rapid and simple method for assessing and representing genome sequences relatedness
Martial Briand
,
Mariam Bouzid
,
Gilles Hunault
,
Marc Legeay
,
Marion Le Saux
Article dans une revue
hal-02171444v1
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Influence of environment and host plant genotype on the structure and diversity of the Brassica napus seed microbiota
Aude Rochefort
,
Martial Briand
,
Coralie Marais
,
Marie-Hélène Wagner
,
Anne Laperche
Article dans une revue
hal-02275205v1
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Differential dynamics of microbial community networks help identify microorganisms interacting with residue-borne pathogens: the case of Zymoseptoria tritici in wheat;
Lydie Kerdraon
,
Matthieu Barret
,
Valerie Laval
,
Frédéric Suffert
Article dans une revue
hal-02624822v1
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Differences in resource use lead to coexistence of seed-transmitted microbial populations
Gloria Torres-Cortés
,
B. J. Garcia
,
Stéphane Compant
,
Samir Rezki
,
P Jones
Article dans une revue
hal-02557440v1
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Optimize the plant microbiota to increase plant growth and health
Matthieu Barret
,
P. Dufour
,
Mylène Durand-Tardif
,
Mahendra Mariadassou
,
Christophe Mougel
Article dans une revue
hal-03297096v1
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Maternal effects and environmental filtering shape seed fungal communities in oak trees
Tania Fort
,
Charlie Pauvert
,
Amy E. Zanne
,
Otso Ovaskainen
,
Thomas Caignard
Article dans une revue
hal-02624819v1
|
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Insect pollination is an ecological process involved in the assembly of the seed microbiota
Alberto Prado Farias
,
Brice Marolleau
,
Bernard Vaissière
,
Matthieu Barret
,
Gloria Torres Cortes
Article dans une revue
hal-02624711v1
|
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Assembly of seed-associated microbial communities within and across successive plant generations
Samir Rezki
,
Claire Campion
,
Philippe Simoneau
,
Marie-Agnès Jacques
,
Ashley Shade
Article dans une revue
hal-02516590v1
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Functional Microbial Features Driving Community Assembly During Seed Germination and Emergence
Gloria Torres-Cortés
,
Sophie Bonneau
,
Olivier Bouchez
,
Clémence Genthon
,
Martial Briand
Article dans une revue
hal-02516666v1
|
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Commentary: seed bacterial inhabitants and their routes of colonization
Carolina Escobar Rodríguez
,
Birgit Mitter
,
Matthieu Barret
,
Angela Sessitsch
,
Stéphane Compant
Article dans une revue
hal-02516685v1
|
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Complete genomic sequence of Raphanus sativus cryptic virus 4 (RsCV4), a novel alphapartitivirus from radish
Laurence Svanella-Dumas
,
Sébastien Theil
,
Matthieu Barret
,
Thierry T. Candresse
Article dans une revue
hal-02516679v1
|
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Editorial special issue: the soil, the seed, the microbes and the plant
Eric Nelson
,
Philippe Simoneau
,
Matthieu Barret
,
Birgit Mitter
,
Stéphane Compant
Article dans une revue
hal-02516579v1
|
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Niches and routes of transmission of Xanthomonas citri pv. fuscans to bean seeds
Armelle Darrasse
,
Matthieu Barret
,
Sophie Cesbron
,
Stéphane Compant
,
Marie-Agnès Jacques
Article dans une revue
hal-02516672v1
|
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In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana
Claudia Bartoli
,
Léa Frachon
,
Matthieu Barret
,
Mylène Rigal
,
Carine Huard-Chauveau
Article dans une revue
hal-02373577v1
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Genome sequence of the necrotrophic plant pathogen Alternaria brassicicola Abra43
Elodie Belmas
,
Martial Briand
,
Anthony Kwasiborski
,
Justine Colou
,
Guillaume Nguyen
Article dans une revue
hal-02516580v1
|
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Bacterial and fungal communities vary with the type of organic substrate: implications for biocontrol of soilless crops
Virginie Montagne
,
Hervé Capiaux
,
Matthieu Barret
,
Patrice Cannavo
,
Sylvain Charpentier
Article dans une revue
hal-01524498v1
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Ancestral acquisitions, gene flow and multiple evolutionary trajectories of the type three secretion system and effectors in Xanthomonas plant pathogens
Déborah Merda
,
Martial Briand
,
Eran Bosis
,
Céline Rousseau
,
Perrine Portier
Article dans une revue
hal-01904571v1
|
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Ecological patterns of seed microbiome diversity, transmission, and assembly
Ashley Shade
,
Marie-Agnès Jacques
,
Matthieu Barret
Article dans une revue
hal-02516692v1
|
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Plant microbiota affects seed transmission of phytopathogenic microorganisms
Matthieu Barret
,
Jean-François Guimbaud
,
Armelle Darrasse
,
Marie Agnes Jacques
Article dans une revue
hal-01353543v1
|
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The severity of nonalcoholic fatty liver disease is associated with gut dysbiosis and shift in the metabolic function of the gut microbiota
Matthieu Barret
,
Mariana Machado
,
Lionel Fizanne
,
Felix Araujo-Perez
,
Cynthia Guy
Article dans une revue
hal-02516681v1
|
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Characterization of relative abundance of lactic acid bacteria species in French organic sourdough by cultural, qPCR and MiSeq high-throughput sequencing methods
Elisa Michel
,
Clarisse Monfort
,
Marion Deffrasnes
,
Stéphane Guezenec
,
Emilie Lhomme
Article dans une revue
hal-01527569v1
|
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Terroir is a key driver of seed-associated microbial assemblages
Stéphanie Klaedtke
,
Marie Agnes Jacques
,
Lorenzo Raggi
,
Anne Preveaux
,
Sophie Bonneau
Article dans une revue
hal-01455975v1
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Differences in stability of seed-associated microbial assemblages in response to invasion by phytopathogenic microorganisms
Samir Rezki
,
Claire Campion
,
Béatrice Iacomi-Vasilescu
,
Anne Préveaux
,
Youness Toualbia
Article dans une revue
hal-01392639v1
|
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Answer to Ling et al “Predictive roles of gut dysbiosis on the severity of NAFLD”
Jérôme Boursier
,
Matthieu Barret
,
Anna Mae Diehl
Article dans une revue
hal-02632028v1
|
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Pairwise transcriptomic analysis of the interactions between the ectomycorrhizal fungus laccaria bicolor S238N and three beneficial, neutral and antagonistic soil bacteria
Aurélie Deveau
,
Matthieu Barret
,
Abdala Gamby Diedhiou
,
Johan Leveau
,
Wietse de Boer
Article dans une revue
hal-01208788v1
|
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Emergence Shapes the Structure of the Seed Microbiota
Matthieu Barret
,
Martial Briand
,
Sophie Bonneau
,
Anne Préveaux
,
Sophie Valière
Article dans une revue
hal-01153480v1
|
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Identification of novel phytase genes from an agricultural soil-derived metagenome.
Hao Tan
,
Marlies J Mooij
,
Matthieu Barret
,
Pardraig M Hegarty
,
Catriona Harington
Article dans une revue
hal-02639216v1
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The SPI-1-like Type III secretion system: more roles than you think
Frank Egan
,
Matthieu Barret
,
Fergal O'Gara
Article dans une revue
hal-01210004v1
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Genome sequence reveals that Pseudomonas fluorescens F113 possesses a large and diverse array of systems for rhizosphere function and host interaction
Miguel Redondo-Nieto
,
Matthieu Barret
,
John Morrissey
,
Kieran Germaine
,
Francisco Martínez-Granero
Article dans une revue
hal-02650368v1
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Characterization of the SPI-1 and Rsp type three secretion systems inPseudomonas fluorescens F113
Matthieu Barret
,
Frank Egan
,
Jennifer Moynihan
,
John P. Morrissey
,
Olivier Lesouhaitier
Article dans une revue
hal-02644403v1
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Subtilomycin: A New Lantibiotic from Bacillus subtilis Strain MMA7 Isolated from the Marine Sponge Haliclona simulans
Robert Phelan
,
Matthieu Barret
,
Paul Cotter
,
Paula O'Connor
,
Rui Chen
Article dans une revue
hal-02651130v1
|
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Molecular evolution of LysR-type transcriptional regulation in Pseudomonas aeruginosa
F. Jerry Reen
,
Matthieu Barret
,
Emilie Fargier
,
Marcus O’muinneacháin
,
Fergal O’gara
Article dans une revue
hal-02649223v1
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Genomic analysis of the biocontrol strain Pseudomonas fluorescens Pf29Arp with evidence of T3SS and T6SS gene expression on plant roots
Muriel Marchi
,
Morgane Boutin
,
Kévin Gazengel
,
Claude Rispe
,
Jean-Pierre Gauthier
Article dans une revue
hal-01208629v1
|
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Long-term phosphorus fertilisation increased the diversity of the total bacterial community and the phoD phosphorus mineraliser group in pasture soils
Hao Tan
,
Matthieu Barret
,
Marlies J. Mooij
,
Olivia Rice
,
John P. Morrissey
Article dans une revue
hal-02653047v1
|
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Distribution and diversity of bacterial secretion systems across metagenomic datasets.
Matthieu Barret
,
Frank Egan
,
Fergal O'Gara
Article dans une revue
hal-02653049v1
|
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Genome Sequence of the Biocontrol Strain Pseudomonas fluorescens F113
M. Redondo-Nieto
,
Matthieu Barret
,
J. P. Morrisey
,
K. Germaine
,
F. Martinez-Granero
Article dans une revue
hal-02652031v1
|
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Functional genomics analysis of plant growth-promoting rhizobacterial traits involved in rhizosphere competence
Matthieu Barret
,
John P. Morrissey
,
Fergal O’gara
Article dans une revue
hal-02650050v1
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Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered
Matthieu Barret
,
F. Egan
,
E. Fargier
,
J. P. Morrissey
,
F. O'Gara
Article dans une revue
hal-02650365v1
|
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Bacterial-fungal Interactions: hyphens between agricultural, clinical, environmental, and food microbiologists
Pascale P. Frey-Klett
,
Peter Burlinson
,
Aurélie Deveau
,
Matthieu Barret
,
M. Tarkka
Article dans une revue
hal-02651157v1
|
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Computational prediction of the Crc regulon identifies genus-wide and species-specific targets of catabolite repression control in Pseudomonas bacteria
Thomas Browne
,
Matthieu Barret
,
Fergal O'Gara
,
John P Morrissey
Article dans une revue
hal-02656830v1
|
|
The plant pathogenic fungus Gaeumannomyces graminis var. tritici improves bacterial growth and triggers early gene regulations in the biocontrol strain Pseudomonas fluorescens Pf29Arp
Matthieu Barret
,
P. Frey-Klett
,
M. Boutin
,
Anne-Yvonne Guillerm-Erckelboudt
,
Frédérique Martin
Article dans une revue
inria-00359115v1
|
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Effect of wheat roots infected with the pathogenic fungus gaeumannomyces graminis var. tritici on gene expression of the biocontrol bacterium pseudomonas fluorescens Pf29Arp
Matthieu Barret
,
Pascale P. Frey-Klett
,
Anne-Yvonne Guillerm-Erckelboudt
,
Morgane Boutin
,
Grégory Guernec
Article dans une revue
hal-02663862v1
|
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Bactéries et champignons interagissent pour la santé des plantes
Alain A. Sarniguet
,
Matthieu Barret
,
Lionel Lebreton
,
Stéphanie Daval
Biofutur, 2008, 284, pp.30-33
Article dans une revue
hal-02664697v1
|