Mathilde Dupont-Nivet

Directrice UMR INRAE/AgroParisTech GABI, Génétique Animale et Biologie Intégrative

Documents

Publications

	Interaction between genetics and inulin affects host metabolism in rainbow trout fed a sustainable all plant-based diet Jep Lokesh , Marine Delaygues , Raphaël Defaix , Mickael Le Béchec , Thierry Pigot British Journal of Nutrition, 2023, pp.1-40. ⟨10.1017/s0007114523000120⟩ Article dans une revue hal-03977878v1
	Maternal and genetic effects on embryonic survival from fertilization to swim up stage and reproductive success in a farmed rainbow trout line K. Paul , P. Pélissier , Lionel Goardon , Nicolas Dechamp , J. Danon Aquaculture Reports, 2023, 29, pp.101523. ⟨10.1016/j.aqrep.2023.101523⟩ Article dans une revue hal-04012991v1
	New alternative ingredients and genetic selection are the next game changers in rainbow trout nutrition: a metabolomics appraisal Simon Roques , Catherine Deborde , Sandrine Skiba-Cassy , Françoise Médale , Mathilde Dupont-Nivet Scientific Reports, 2023, 13, ⟨10.1038/s41598-023-46809-2⟩ Article dans une revue hal-04305424v1
	Isogenic lines of rainbow trout (Oncorhynchus mykiss) as a tool to assess how growth and feeding behaviour are correlated to feed efficiency in fish Simon Pouil , Thierry Kerneis , Edwige Quillet , Laurent Labbé , Delphine Lallias Aquaculture, 2023, 577, pp.739904. ⟨10.1016/j.aquaculture.2023.739904⟩ Article dans une revue hal-04172992v1
	Are resistances to acute hyperthermia or hypoxia stress similar and consistent between early and late ages in rainbow trout using isogenic lines? H. Lagarde , Florence Phocas , Simon Pouil , Lionel Goardon , M. Bideau Aquaculture, 2023, 562, pp.738800. ⟨10.1016/j.aquaculture.2022.738800⟩ Article dans une revue hal-03778854v1
	Genetic architecture of acute hyperthermia resistance in juvenile rainbow trout (Oncorhynchus mykiss) and genetic correlations with production traits Henri Lagarde , Delphine Lallias , Pierre Patrice , Audrey Dehaullon , Martin Prchal Genetics Selection Evolution, 2023, 55 (1), pp.39. ⟨10.1186/s12711-023-00811-4⟩ Article dans une revue hal-04125895v1
	Prediction of fatty acids composition in the rainbow trout Oncorhynchus mykiss by using Raman micro-spectroscopy E. Prado , Christophe Eklouh-Molinier , Florian Enez , David Causeur , C. Blay Analytica Chimica Acta, 2022, 1191, ⟨10.1016/j.aca.2021.339212⟩ Article dans une revue hal-03445774v1
	Development of a High-Density 665 K SNP Array for Rainbow Trout Genome-Wide Genotyping Maria Bernard , Audrey Dehaullon , Guangtu Gao , Katy Paul , Henri Lagarde Frontiers in Genetics, 2022, 13, ⟨10.3389/fgene.2022.941340⟩ Article dans une revue hal-03725675v1
	Realised genetic gains on growth, survival, feed conversion ratio and quality traits after ten generations of multi-trait selection in rainbow trout Oncorhynchus mykiss, fed a standard diet or a “future” fish-free and soy-free diet Marc Vandeputte , Geneviève Corraze , Jérôme Doerflinger , Florian Enez , Frédéric Clota Aquaculture Reports, 2022, 27, pp.101363. ⟨10.1016/j.aqrep.2022.101363⟩ Article dans une revue hal-03812229v1
	Genome-wide association study and genomic prediction of tolerance to acute hypoxia in rainbow trout M Prchal , Jonathan D’ambrosio , Henri Lagarde , Delphine Lallias , P Patrice Aquaculture, 2022, 565, pp.739068. ⟨10.1016/j.aquaculture.2022.739068⟩ Article dans une revue hal-03944462v1
	A plant-based diet differentially affects the global hepatic methylome in rainbow trout depending on genetic background Lucie Marandel , Cécile Heraud , Vincent Veron , Laithier J , Marchand M Epigenetics, 2022, online first, pp.1-12. ⟨10.1080/15592294.2022.2058226⟩ Article dans une revue hal-03638629v1
	Why and How to Switch to Genomic Selection: Lessons From Plant and Animal Breeding Experience Aline Fugeray-Scarbel , Catherine Bastien , Mathilde Dupont-Nivet , Stéphane Lemarié Frontiers in Genetics, 2021, 12 (July), pp.629737. ⟨10.3389/fgene.2021.629737⟩ Article dans une revue hal-03286882v1
	Genetic architecture and genomic selection of fatty acid composition predicted by Raman spectroscopy in rainbow trout Carole Blay , Pierrick Haffray , Jonathan D’ambrosio , Enora Prado , Nicolas Dechamp BMC Genomics, 2021, 22 (1), pp.788. ⟨10.1186/s12864-021-08062-7⟩ Article dans une revue hal-03432316v1
	Genetic parameters and genome-wide association studies of quality traits characterised using imaging technologies in Rainbow trout, Oncorhynchus mykiss Carole Blay , Pierrick Haffray , Jérôme Bugeon , Jonathan D’ambrosio , Nicolas Dechamp Frontiers in Genetics, 2021, 12, pp.1-17. ⟨10.3389/fgene.2021.639223⟩ Article dans une revue hal-03154333v1
	Why Do Some Rainbow Trout Genotypes Grow Better With a Complete Plant-Based Diet? Transcriptomic and Physiological Analyses on Three Isogenic Lines Thérèse Callet , Mathilde Dupont-Nivet , Morgane Danion , Christine Burel , Marianne Cluzeaud Frontiers in Physiology, 2021, 12, pp.732321. ⟨10.3389/fphys.2021.732321⟩ Article dans une revue hal-03349230v1
	Genetic architecture and genomic selection of female reproduction traits in rainbow trout J. D’ambrosio , Romain Morvezen , S. Brard-Fudulea , Anastasia Bestin , A. Acin Perez BMC Genomics, 2020, 21 (1), pp.1-14. ⟨10.1186/s12864-020-06955-7⟩ Article dans une revue hal-02938176v1
	Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background Delphine Lallias , Maria Bernard , Céline Ciobotaru , Nicolas Dechamp , Laurent Labbé Epigenetics, 2020, ⟨10.1080/15592294.2020.1834924⟩ Article dans une revue hal-03003559v1
	How to genetically increase fillet yield in fish: Relevant genetic parameters and methods to predict genetic gain Marc Vandeputte , Clémence Fraslin , Pierrick Haffray , Anastasia Bestin , François Allal Aquaculture, 2020, 519, pp.734877. ⟨10.1016/j.aquaculture.2019.734877⟩ Article dans une revue hal-03150887v1
	Genome-wide estimates of genetic diversity, inbreeding and effective size of experimental and commercial rainbow trout lines undergoing selective breeding Jonathan D’ambrosio , Florence Phocas , Pierrick Haffray , Anastasia Bestin , Sophie Brard-Fudulea Genetics Selection Evolution, 2019, 51 (1), pp.26. ⟨10.1186/s12711-019-0468-4⟩ Article dans une revue hal-02151750v1
	MicroRNAs related to cholesterol metabolism affected by vegetable diet in rainbow trout (Oncorhynchus mykiss) from control and selected lines Tengfei Zhu , Geneviève Corraze , Elisabeth Plagnes-Juan , Jérôme Montfort , Julien Bobe Aquaculture, 2019, 498, pp.132-142. ⟨10.1016/j.aquaculture.2018.08.058⟩ Article dans une revue hal-01870570v1
	First evidence of realized selection response on fillet yield in Rainbow trout Oncorhynchus mykiss, Using Sib selection or based on correlated ultrasound measurements Marc Vandeputte , Jérôme Bugeon , Anastasia Bestin , Alexandre Desgranges , Jean-Michel Allamellou Frontiers in Genetics, 2019, 10, pp.1-13. ⟨10.3389/fgene.2019.01225⟩ Article dans une revue hal-02627462v1
	Regulation by dietary carbohydrates of intermediary metabolism in liver and muscle of two isogenic lines of rainbow trout Xuerong Song , Lucie Marandel , Sandrine Cassy , Geneviève Corraze , Mathilde Dupont-Nivet Frontiers in Physiology, 2018, 9, ⟨10.3389/fphys.2018.01579⟩ Article dans une revue hal-02624694v1
	Regulation of genes related to cholesterol metabolism in rainbow trout (Oncorhynchus mykiss) fed a plant-based diet Tengfei Zhu , Geneviève Corraze , Elisabeth Plagnes- Juan , Edwige Quillet , Mathilde Dupont-Nivet AJP - Regulatory, Integrative and Comparative Physiology, 2018, 314 (1), pp.R58-R70. ⟨10.1152/ajpregu.00179.2017⟩ Article dans une revue hal-01901318v1
	How to genetically increase fillet yield in fish: New insights from simulations based on field data Clémence Fraslin , Mathilde Dupont-Nivet , Pierrick Haffray , Anastasia Bestin , Marc Vandeputte Aquaculture, 2018, 486, pp.175-183. ⟨10.1016/j.aquaculture.2017.12.012⟩ Article dans une revue hal-01674984v1
	Hepatic Glucose Metabolic Responses to Digestible Dietary Carbohydrates in Two Isogenic Lines of Rainbow Trout Xuerong Song , Lucie Marandel , Mathilde Dupont-Nivet , Edwige Quillet , Inge Geurden Biology Open, 2018, 7 (6), 11 p. ⟨10.1242/bio.032896⟩ Article dans une revue hal-02139723v1
	Accuracy of BLUP breeding values in a factorial mating design with mixed families and marker-based parentage assignment in rainbow trout Oncorhynchus mykiss Pierrick Haffray , Florian Enez , Jérôme Bugeon , Hervé Chapuis , Mathilde Dupont-Nivet Aquaculture, 2018, 490, pp.350-354. ⟨10.1016/j.aquaculture.2018.03.003⟩ Article dans une revue hal-01764389v1
	Detection of new pathways involved in the acceptance and the utilisation of a plant-based diet in isogenic lines of rainbow trout fry. Thérèse Callet , Mathilde Dupont-Nivet , Marianne Cluzeaud , Florence Jaffrezic , Denis Laloë PLoS ONE, 2018, 13 (7), pp.e0201462. ⟨10.1371/journal.pone.0201462⟩ Article dans une revue hal-01857986v1
	Metapopulation patterns of additive and nonadditive genetic variance in the sea bass (Dicentrarchus labrax) Bruno Guinand , Marc Vandeputte , Mathilde Dupont-Nivet , Alain Vergnet , Pierrick Haffray Ecology and Evolution, 2017, 7 (8), pp.2777-2790. ⟨10.1002/ece3.2832⟩ Article dans une revue hal-01606597v1
	Successful selection of rainbow trout (Oncorhynchus mykiss) on their ability to grow with a diet completely devoid of fishmeal and fish oil, and correlated changes in nutritional traits Thérèse Callet , Françoise Médale , Laurence Larroquet , Anne Surget , Pierre Aguirre PLoS ONE, 2017, 12 (10), 21 p. ⟨10.1371/journal.pone.0186705⟩ Article dans une revue hal-01901313v1
	Genetic variability of environmental sensitivity revealed by phenotypic variation in body weight and (its) correlations to physiological and behavioral traits Delphine Lallias , Edwige Quillet , Marie-Laure Bégout , Benoît Aupérin , Hooi Ling Khaw PLoS ONE, 2017, 12 (12), pp.1-19. ⟨10.1371/journal.pone.0189943⟩ Article dans une revue hal-01674985v1
	Quantitative genetic variation for post-stress cortisol and swimming performance in growth-selected and control populations of European sea bass (Dicentrarchus labrax) Marc Vandeputte , J.D. Porte , Benoît Aupérin , Mathilde Dupont-Nivet , A. Vergnet Aquaculture, 2016, 455, pp.1-7. ⟨10.1016/j.aquaculture.2016.01.003⟩ Article dans une revue hal-01259738v1
	Long-term feeding a plant-based diet devoid of marine ingredients strongly affects certain key metabolic enzymes in the rainbow trout liver Vincent Veron , Stéphane Panserat , Richard Le Boucher , Laurent Labbé , Edwige Quillet Fish Physiology and Biochemistry, 2016, 42 (2), pp.771-785. ⟨10.1007/s10695-015-0174-2⟩ Article dans une revue hal-01533866v1
	Adaptive capacities from survival to stress responses of two isogenic lines of rainbow trout fed a plant-based diet Bastien Sadoul , Aurélie Foucard , Claudiane Valotaire , Laurent Labbé , Lionel Goardon Scientific Reports, 2016, 6 (1), pp.1-11. ⟨10.1038/srep35957⟩ Article dans une revue hal-01595194v1
	Contrast and phase-shift of a trapped atom interferometer using a thermal ensemble with internal state labelling Christoph I Westbrook , Mathilde Dupont-Nivet , Sylvain Schwartz New Journal of Physics, 2016, 18 (11), ⟨10.1088/1367-2630/18/11/113012⟩ Article dans une revue hal-01696590v1
	Molecular pathways associated with the nutritional programming of plant-based diet acceptance in rainbow trout following an early feeding exposure Mukundh N. Balasubramanian , Stéphane Panserat , Mathilde Dupont-Nivet , Edwige Quillet , Jérôme Montfort BMC Genomics, 2016, 17 (1), pp.1-20. ⟨10.1186/s12864-016-2804-1⟩ Article dans une revue hal-01346912v1
	Three-year breding cycle of rainbow trout (Oncorhynchus mykiss) fed a plant-based diet, totally free of marine resources : consequences for reproduction, fatty acid composition and progeny survival Viviana Lazzarotto , Geneviève Corraze , Amandine Leprevost , Edwige Quillet , Mathilde Dupont-Nivet PLoS ONE, 2015, 10 (2), 17 p. ⟨10.1371/journal.pone.0117609⟩ Article dans une revue hal-01194043v1
	Le phénotypage de l’efficacité alimentaire et de ses composantes, une nécessité pour accroître l’efficience des productions animales Florence Phocas , Jacques Agabriel , Mathilde Dupont-Nivet , Inge Geurden , Françoise Médale INRA Productions Animales, 2014, 27 (3), pp.235-248 Article dans une revue hal-01193938v1
	Assessment of genetic variability of fish personality traits using rainbow trout isogenic lines Sandie Millot , Samuel Péan , Laurent Labbé , Thierry Kerneis , Edwige Quillet Behavior Genetics, 2014, 44 (4), pp.383-393. ⟨10.1007/s10519-014-9652-z⟩ Article dans une revue hal-01193887v1
	Multi-site evaluation of the rearing performances of 5 wild populations of European sea bass (Dicentrarchus labrax) Marc Vandeputte , Romain R. Garouste , Mathilde Dupont-Nivet , Pierrick Haffray , Alain A. Vergnet Aquaculture, 2014, 424-425, pp.239-248. ⟨10.1016/j.aquaculture.2014.01.005⟩ Article dans une revue hal-01004791v1
	Amélioration génétique et utilisation des aliments à base de végétaux en pisciculture Richard R. Le Boucher , Mathilde Dupont-Nivet , S. S. Laureau , Laurent Labbé , Inge I. Geurden INRA Productions Animales, 2013, 26 (4), pp.317-326 Article dans une revue hal-01004732v1
	Génétique de l’adaptation comportementale des animaux aux conditions d’élevage : le cas des productions bovines, porcines, avicoles et aquacoles Laurianne L. Canario , Sandrine Grasteau , Mathilde Dupont-Nivet , Florence Phocas INRA Productions Animales, 2013, 26 (1), pp.35-50 Article dans une revue hal-01193846v1
	Genetics of behavioural adaptation of livestock to farming conditions. Laurianne L. Canario , Sandrine Mignon-Grasteau , Mathilde Dupont-Nivet , Florence Phocas Animal, 2013, 7 (3), pp.357-377. ⟨10.1017/S1751731112001978⟩ Article dans une revue hal-01019444v1
	Des aliments à base de végétaux pour les poissons d'élevage Françoise Médale , Richard Le Boucher , Mathilde Dupont-Nivet , Edwige Quillet , Joël Aubin INRA Productions Animales, 2013, 26 (4), pp.303-316 Article dans une revue hal-01019139v1
	Genetic parameters of in-vivo prediction of carcass, head and fillet yields by internal ultrasound and 2D external imagery in large rainbow trout Pierrick Haffray , Jérôme Bugeon , Quentin Rivard , Benjamin Quittet , Sophie Puyo Aquaculture, 2013, 410-411, pp.236-244. ⟨10.1016/j.aquaculture.2013.06.016⟩ Article dans une revue hal-00877146v1
	Genotype by diet interactions in European sea bass (Dicentrarchus labrax L.): Nutritional challenge with totally plant-based diets Richard R. Le Boucher , Marc Vandeputte , Mathilde Dupont-Nivet , Edwige Quillet , F. F. Ruelle Journal of Animal Science, 2013, 91 (1), pp.44-56. ⟨10.2527/jas.2012-5311⟩ Article dans une revue hal-01001264v1
	Heritabilities and correlations of deformities and growth related traits in the European sea bass (Dicentrarchus labrax, L.) in four different sites Bilge B. Karahan , Béatrice B. Chatain , Hervé H. Chavanne , Alain A. Vergnet , Agnès A. Bardon Aquaculture Research, 2013, 44 (2), pp.289-299. ⟨10.1111/j.1365-2109.2011.03082.x⟩ Article dans une revue hal-01000404v1
	The positive impact of the early-feeding of a plant-based diet on its future acceptance and utilisation in rainbow trout Inge Geurden , Peter Borchert , Mukundh Balasubramanian , J.W. Schrama , Mathilde Dupont-Nivet PLoS ONE, 2013, 8 (12), ⟨10.1371/journal.pone.0083162⟩ Article dans une revue hal-01189813v1
	Negative genetic correlations between production traits and head or bony tissues in large all-female rainbow trout (Oncorhynchus mykiss) Pierrick Haffray , Jérôme Bugeon , Cédric Pincent , Hervé Chapuis , Emmanuel Mazeiraud Aquaculture, 2012, 368-369, pp.145-152. ⟨10.1016/j.aquaculture.2012.09.023⟩ Article dans une revue hal-01000352v1
	Selection for adaptation to dietary shifts: towards sustainable breeding of carnivorous fish Richard R. Le Boucher , Mathilde Dupont-Nivet , Marc Vandeputte , Thierry Kerneis , Lionel Goardon PLoS ONE, 2012, 7, online (9), Non paginé. ⟨10.1371/journal.pone.0044898⟩ Article dans une revue hal-01000610v1
	Comparison of isogenic lines provides evidence that phenotypic plasticity is under genetic control in rainbow trout Oncorhynchus mykiss Mathilde Dupont-Nivet , Christèle Robert-Granié , Sandrine Le Guillou , Franck F. Tiquet , Edwige Quillet Journal of Fish Biology, 2012, 81 (5), pp.1754-1762. ⟨10.1111/j.1095-8649.2012.03437.x⟩ Article dans une revue hal-01000320v1
	Minimizing maternal effect in salmonid families mixed since eyed stage and a posteriori DNA-pedigreed Pierrick Haffray , Marc Vandeputte , V. V. Petit , Cédric C. Pincent , Beatrice B. Chatain Livestock Science, 2012, 150 (1-3), pp.170-178. ⟨10.1016/j.livsci.2012.08.017⟩ Article dans une revue hal-01000366v1
	Is avoiding full sib matings really worthwhile in a breeding program? Mathilde Dupont-Nivet , Marc Vandeputte Aquaculture, 2011, 314 (1-4), pp.277-281. ⟨10.1016/j.aquaculture.2011.02.008⟩ Article dans une revue hal-00999833v1
	Plant-based diet in rainbow trout (Oncorhynchus mykiss Walbaum): Are there genotype-diet interactions for main production traits when fish are fed marine vs. plant-based diets from the first meal? Richard R. Le Boucher , Edwige Quillet , Marc Vandeputte , Jean-Michel Le Calvez Lecalvez , Lionel Goardon Aquaculture, 2011, 321 (1-2), pp.41-48. ⟨10.1016/j.aquaculture.2011.08.010⟩ Article dans une revue hal-01000179v1
	A first insight into genotype x diet interactions in European sea bass (Dicentrarchus labrax L. 1756) in the context of plant-based diet use Richard R. Le Boucher , Marc Vandeputte , Mathilde Dupont-Nivet , Edwige Quillet , David Mazurais Aquaculture Research, 2011, 42 (4), pp.583-592. ⟨10.1111/j.1365-2109.2010.02654.x⟩ Article dans une revue hal-01000163v1
	Population and family growth response to different rearing location, heritability estimates and genotype × environment interaction in the silver-lip pearl oyster (Pinctada maxima) Renate Kvingedal , Brad S. Evans , Curtis E. Lind , Joseph J.U. Taylor , Mathilde Dupont-Nivet Aquaculture, 2010, 304 (1-4), pp.1-6. ⟨10.1016/j.aquaculture.2010.02.035⟩ Article dans une revue hal-01193390v1
	Genotype by environment interactions for growth in European seabass (Dicentrarchus labrax) are large when growth rate rather than weight is considered Mathilde Dupont-Nivet , Bilge Karahan-Nomm , Alain Vergnet , Olivier Merdy , Pierrick Haffray Aquaculture, 2010, 306 (1-4), pp.365-368. ⟨10.1016/j.aquaculture.2010.05.025⟩ Article dans une revue hal-01193440v1
	Side effects of sexual maturation on heritability estimates in rainbow trout (Oncorhynchus mykiss) Mathilde Dupont-Nivet , Bernard Chevassus-Au-Louis , Stéphane Mauger , Pierrick Haffray , Marc Vandeputte Aquaculture Research, 2010, 41 (11), pp.e878-e880. ⟨10.1111/j.1365-2109.2009.02448.x⟩ Article dans une revue hal-01193666v1
	Body proportions and chemical composition of wild and reared edible snails of Ivory coast A. Otchoumou , Mathilde Dupont-Nivet , L. Ocho Anin Atchibri , H. Dosso Italian Journal of Food Science, 2010, 22 (1), pp.105-110 Article dans une revue hal-02655381v1
	What is the heritable component of spinal deformities in the European sea bass (Dicentrarchus labrax)? Agnès Bardon , Marc Vandeputte , Mathilde Dupont-Nivet , Hervé Chavanne , Pierrick Haffray Aquaculture, 2009, 294 (3-4), pp.194-201. ⟨10.1016/j.aquaculture.2009.06.018⟩ Article dans une revue hal-01193361v1
	X-ray quantitative texture analysis on Helix aspersa aspera (Pulmonata) shells selected or not for increased weight Daniel Chateigner , Reinier Kaptein , Mathilde Dupont-Nivet American malacological Bulletin, 2009, 27 (1-2), pp.157-165. ⟨10.4003/006.027.0213⟩ Article dans une revue hal-02662793v1
	Genetic variation for carcass quality traits in cultured sea bass (Dicentrarchus labrax) Eric Saillant , Mathilde Dupont-Nivet , Marie Sabourault , Pierrick Haffray , Stanislas Laureau Aquatic Living Resources, 2009, 22 (1), pp.105-112. ⟨10.1051/alr/2009010⟩ Article dans une revue hal-01193427v1
	Response to domestication and selection for growth in the European sea bass (Dicentrarchus labrax) in separate and mixed tanks Marc Vandeputte , Mathilde Dupont-Nivet , Pierrick Haffray , Hervé Chavanne , Silvia Cenadelli Aquaculture, 2009, 286 (1-2), pp.20-27. ⟨10.1016/j.aquaculture.2008.09.008⟩ Article dans une revue hal-02663646v1
	Evidence of genotype-diet interactions in the response of rainbow trout (Oncorhynchus mykiss) clones to a diet with or without fishmeal at early growth Mathilde Dupont-Nivet , Françoise Médale , Julien Leonard , Sandrine Le Guillou , Franck Tiquet Aquaculture, 2009, 295 (1-2), pp.15-21. ⟨10.1016/j.aquaculture.2009.06.031⟩ Article dans une revue hal-01193406v1
	Scaling of metabolism in Helix aspersa snails: changes through ontogeny and response to selection for increased size. M. Czarnoleski , J. Kozlowski , G. Dumiot , J.C. Bonnet , J. Mallard Journal of Experimental Biology, 2008, 211, pp.391-399 Article dans une revue hal-02665612v1
	Genetic variation for growth at one and two summers of age in the common carp (Cyprinus carpio L.): Heritability estimates and response to selection Marc Vandeputte , Martin Kocour , Stéphane S. Mauger , Marek Rodina , Amandine Launay Aquaculture, 2008, 277 (1-2), pp.7-13. ⟨10.1016/j.aquaculture.2008.02.009⟩ Article dans une revue hal-02667001v1
	Genetická variance růstu u kapra obecného (Cyprinus carpio L.) ve vĕku jednoho a dvou let: Odhady heritability a selekčni odzeva Marc Vandeputte , Martin Kocour , Sophie Mauger , Marek Rodina , Amandine Launay Bulletin VURH Vodnany, 2008, 44 (4), pp.109-117 Article dans une revue hal-02663241v1
	Heritabilities and GxE interactions for growth in the European sea bass (Dicentrarchus labrax L.) using a marker-based pedigree Mathilde Dupont-Nivet , Marc Vandeputte , Alain Vergnet , Olivier Merdy , Pierrick Haffray Aquaculture, 2008, 275 (1-4), pp.81-87. ⟨10.1016/j.aquaculture.2007.12.032⟩ Article dans une revue hal-02666809v1
	A polygenic hypothesis for sex determination in the European Sea Bass Dicentrarchus labrax. Marc Vandeputte , Mathilde Dupont-Nivet , Hervé Chavanne , Béatrice Chatain Genetics, 2007, 176, pp.1049-1057 Article dans une revue hal-02661907v1
	Effects of photoperiod on growth and reproduction in Archachatina ventricosa (Gould, 1850) under indoor rearing conditions. A. Otchoumou , Mathilde Dupont-Nivet , L. Anin Ocho , H. Dosso Invertebrate Reproduction and Development, 2007, 50, pp.109-115 Article dans une revue hal-02655228v1
	Estimates of heritability and genotype-environment interactions for body weight in sea bass (Dicentrarchus labrax L.) raised under communal rearing conditions. E. Saillant , Mathilde Dupont-Nivet , Pierrick Haffray , Béatrice Chatain Aquaculture, 2006, 254, pp.139-147 Article dans une revue hal-02656150v1
	An evaluation of allowing for mismatches as a way to manage genotyping errors in parentage assignment by exclusion. Marc Vandeputte , S. Mauger , Mathilde Dupont-Nivet Molecular Ecology Notes, 2006, 6, pp.265-267 Article dans une revue hal-02659491v1
	Effect of different mating designs on inbreeding, genetic variance and response to selection when applying individual selection in fish breeding programs. Mathilde Dupont-Nivet , Marc Vandeputte , Pierrick Haffray , B. Chevassus Aquaculture, 2006, 252, pp.161-170 Article dans une revue hal-02654282v1
	Does avoiding full sibs matings preserves genetic variability in a selection scheme? Case of single pair matings. Mathilde Dupont-Nivet , Marc Vandeputte Aquaculture, 2005, 247, pp.12 Article dans une revue hal-02670830v1
	The edible snails of Côte d'Ivoire: effects of photoperiod on the growth and the reproduction performances of Achatina achatina (Linné, 1720) in indoor rearing. A. Otchoumou , Mathilde Dupont-Nivet , H. Dosso Bollettino Malacologico, 2005, 41,9 (,9-12), pp.1-22 Article dans une revue hal-02676094v1
	Heritability estimates for growth-related traits using microsatellite parentage assignment in juvenile common carp (Cyprinus carpio L.). Marc Vandeputte , M. Kocour , S. Mauger , Mathilde Dupont-Nivet , D. de Guerry Aquaculture, 2005, 247, pp.31-32 Article dans une revue hal-02673305v1
	Les escargots comestibles d'Afrique : effet de la teneur en calcium alimentaire sur les performances de croissance d'Achatina achatina (Linné, 1758). A. Otchoumou , Mathilde Dupont-Nivet , H. Dosso Agronomie Africaine, 2005, 17 (2), pp.1-11 Article dans une revue hal-02678275v1
	Les escargots comestibles de Côte d'Ivoire: Effet de quelques plantes, d'aliments concentrés et de la teneur en calcium alimentaire sur la croissance d'Archachatina ventricosa Gould 1850 en élevage hors sol en bâtiment. A. Otchoumou , Mathilde Dupont-Nivet , H. Dosso Tropicultura, 2004, 22, pp.127-133 Article dans une revue hal-02681863v1
	Evidence for genetic control of adult weight plasticity in the snail Helix aspersa Mathieu Ros , Daniel Sorensen , Rasmus Waagepetersen , Mathilde Dupont-Nivet , Magali San Cristobal Genetics, 2004, 168 (4), pp.2089-2097. ⟨10.1534/genetics.104.032672⟩ Article dans une revue hal-02680673v1
	Heritability estimates for growth-related traits using microsatellite parentage assignment in juvenile common carp (Cyprinus carpio L.). Marc Vandeputte , M. Kocour , S. Mauger , Mathilde Dupont-Nivet , D. de Guerry Aquaculture, 2004, 235, pp.223-236 Article dans une revue hal-02681237v1
	Optimization of factorial mating designs for inference on heritability in fish species Mathilde Dupont-Nivet , Marc Vandeputte , Bernard Chevassus-Au-Louis Aquaculture, 2002, 204 (3-4), pp.361-370. ⟨10.1016/S0044-8486(01)00839-0⟩ Article dans une revue hal-02677492v1
	Evolution of genetic variability in a population of the edible snail, Helix aspersa Muller, undergoing domestication and short-term selection Mathilde Dupont-Nivet , J. Mallard , J.C. Bonnet , J.M. Blanc Heredity, 2001, 87, pp.129-135 Article dans une revue hal-02674237v1
	Evolution of genetic variability on a population of the edible snail, Helix aspersa Müller, undergoing domestication and short-term selection. Mathilde Dupont-Nivet , J. Mallard , J.C. Bonnet , J.M. Blanc Heredity, 2001, 87, pp.129-135 Article dans une revue hal-02673790v1
	Setting up a strain-testing design for the seabass, Dicentrarchus labrax: a simulation study Marc Vandeputte , Mathilde Dupont-Nivet , Béatrice Chatain , B. Chevassus Aquaculture, 2001, 202, pp.329-342 Article dans une revue hal-02674893v1
	Rearing density effect on the production performance of the edible snail Helic aspersa Muller in indoor rearing Mathilde Dupont-Nivet , V. Coste , P. Coinon , J.C. Bonnet , J.M. Blanc Annales de zootechnie, 2000, 49, pp.447-456 Article dans une revue hal-02697795v1
	Direct and correlated responses to individual selection for large adult weight in the edible snail Helix aspersa Muller Mathilde Dupont-Nivet , J. Mallard , J.C. Bonnet , J.M. Blanc Journal of Experimental Zoology, 2000, 287, pp.80-85 Article dans une revue hal-02690990v1
	Rearing density effect on the production performance of the edible snail Helix aspersa Müller in indoor rearing Mathilde Dupont-Nivet , Virginie Coste , Pierre Coinon , Jean-Claude Bonnet , Jean-Marie Blanc Annales de zootechnie, 2000, 49 (5), pp.447-456. ⟨10.1051/animres:2000135⟩ Article dans une revue hal-00889908v1
	Direct and correlated responses to individual selection for large adult weight in the edible snail Helix aspersa Muller. Mathilde Dupont-Nivet , J. Mallard , J.C. Bonnet , J.M. Blanc Journal of Experimental Zoology, 2000, 287, pp.80-85 Article dans une revue hal-02691311v1
	Quantitative genetics of reproductive traits in the edible snail Helix aspersa Müller Mathilde Dupont-Nivet , J. Mallard , J.C. Bonnet , J.M. Blanc Journal of Experimental Zoology, 1998, 281, pp.220-227 Article dans une revue hal-02691671v1
	Quantitative genetics of growth traits in the edible snail, Helix aspersa Müller Mathilde Dupont-Nivet , J Mallard , Jc Bonnet , Jm Blanc Genetics Selection Evolution, 1997, 29 (6), pp.571-587 Article dans une revue hal-00894188v1
	Genetic and environmental variability of adult size in some stockes of the edible snail, Helix aspersa Mathilde Dupont-Nivet , A. Guiller , J.C. Bonnet Journal of Zoology, 1997, 241, pp.757-765 Article dans une revue hal-02695461v1
	Génétique quantitative des caractères de croissance chez l'escargot comestible, Helix aspersa Müller Mathilde Dupont-Nivet , J. Mallard , J.C. Bonnet , J.M. Blanc Genetics Selection Evolution, 1997, 29 (6), pp.571-587 Article dans une revue hal-02697308v1
	Influence de la race et du niveau genetique de production laitiere sur les performances des veaux de boucherie E. Daburon , A. Müller , Mathilde Dupont-Nivet , R. Toullec , J Jacques J. J. Colleau Bulletin Technique, Centre de Recherches Zootechniques et Vétérinaires de Theix, 1985, 60, pp.5-11 Article dans une revue hal-02727344v1
	Sélection laitière divergente en race bovine Normande. I. Effets sur la production de viande des taurillons J Jacques J. J. Colleau , J. Lefebvre , Mathilde Dupont-Nivet , Christian Felgines , M. Wimitzky Genetics Selection Evolution, 1983, 15 (1), pp.119-146 Article dans une revue hal-02721076v1
	Analyse des variations génétiques d’adaptation de jeunes bovins « Bos Taurus » à un stress thermique court J Jacques J. J. Colleau , M. Singh , Mathilde Dupont-Nivet , Daniel Tanguy , Marie-Madeleine Briend Genetics Selection Evolution, 1979, 11 (3), pp.187-221 Article dans une revue hal-02732237v1

Mathilde Dupont-Nivet

Publications

Interaction between genetics and inulin affects host metabolism in rainbow trout fed a sustainable all plant-based diet

Maternal and genetic effects on embryonic survival from fertilization to swim up stage and reproductive success in a farmed rainbow trout line

New alternative ingredients and genetic selection are the next game changers in rainbow trout nutrition: a metabolomics appraisal

Isogenic lines of rainbow trout (Oncorhynchus mykiss) as a tool to assess how growth and feeding behaviour are correlated to feed efficiency in fish

Are resistances to acute hyperthermia or hypoxia stress similar and consistent between early and late ages in rainbow trout using isogenic lines?

Genetic architecture of acute hyperthermia resistance in juvenile rainbow trout (Oncorhynchus mykiss) and genetic correlations with production traits

Prediction of fatty acids composition in the rainbow trout Oncorhynchus mykiss by using Raman micro-spectroscopy

Development of a High-Density 665 K SNP Array for Rainbow Trout Genome-Wide Genotyping

Realised genetic gains on growth, survival, feed conversion ratio and quality traits after ten generations of multi-trait selection in rainbow trout Oncorhynchus mykiss, fed a standard diet or a “future” fish-free and soy-free diet

Genome-wide association study and genomic prediction of tolerance to acute hypoxia in rainbow trout

A plant-based diet differentially affects the global hepatic methylome in rainbow trout depending on genetic background

Why and How to Switch to Genomic Selection: Lessons From Plant and Animal Breeding Experience

Genetic architecture and genomic selection of fatty acid composition predicted by Raman spectroscopy in rainbow trout

Genetic parameters and genome-wide association studies of quality traits characterised using imaging technologies in Rainbow trout, Oncorhynchus mykiss

Why Do Some Rainbow Trout Genotypes Grow Better With a Complete Plant-Based Diet? Transcriptomic and Physiological Analyses on Three Isogenic Lines

Genetic architecture and genomic selection of female reproduction traits in rainbow trout

Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background

How to genetically increase fillet yield in fish: Relevant genetic parameters and methods to predict genetic gain

Genome-wide estimates of genetic diversity, inbreeding and effective size of experimental and commercial rainbow trout lines undergoing selective breeding

MicroRNAs related to cholesterol metabolism affected by vegetable diet in rainbow trout (Oncorhynchus mykiss) from control and selected lines

First evidence of realized selection response on fillet yield in Rainbow trout Oncorhynchus mykiss, Using Sib selection or based on correlated ultrasound measurements

Regulation by dietary carbohydrates of intermediary metabolism in liver and muscle of two isogenic lines of rainbow trout

Regulation of genes related to cholesterol metabolism in rainbow trout (Oncorhynchus mykiss) fed a plant-based diet

How to genetically increase fillet yield in fish: New insights from simulations based on field data

Hepatic Glucose Metabolic Responses to Digestible Dietary Carbohydrates in Two Isogenic Lines of Rainbow Trout

Accuracy of BLUP breeding values in a factorial mating design with mixed families and marker-based parentage assignment in rainbow trout Oncorhynchus mykiss

Detection of new pathways involved in the acceptance and the utilisation of a plant-based diet in isogenic lines of rainbow trout fry.

Metapopulation patterns of additive and nonadditive genetic variance in the sea bass (Dicentrarchus labrax)

Successful selection of rainbow trout (Oncorhynchus mykiss) on their ability to grow with a diet completely devoid of fishmeal and fish oil, and correlated changes in nutritional traits

Genetic variability of environmental sensitivity revealed by phenotypic variation in body weight and (its) correlations to physiological and behavioral traits

Quantitative genetic variation for post-stress cortisol and swimming performance in growth-selected and control populations of European sea bass (Dicentrarchus labrax)

Long-term feeding a plant-based diet devoid of marine ingredients strongly affects certain key metabolic enzymes in the rainbow trout liver

Adaptive capacities from survival to stress responses of two isogenic lines of rainbow trout fed a plant-based diet

Contrast and phase-shift of a trapped atom interferometer using a thermal ensemble with internal state labelling

Molecular pathways associated with the nutritional programming of plant-based diet acceptance in rainbow trout following an early feeding exposure

Three-year breding cycle of rainbow trout (Oncorhynchus mykiss) fed a plant-based diet, totally free of marine resources : consequences for reproduction, fatty acid composition and progeny survival

Le phénotypage de l’efficacité alimentaire et de ses composantes, une nécessité pour accroître l’efficience des productions animales

Assessment of genetic variability of fish personality traits using rainbow trout isogenic lines

Multi-site evaluation of the rearing performances of 5 wild populations of European sea bass (Dicentrarchus labrax)

Amélioration génétique et utilisation des aliments à base de végétaux en pisciculture

Génétique de l’adaptation comportementale des animaux aux conditions d’élevage : le cas des productions bovines, porcines, avicoles et aquacoles

Genetics of behavioural adaptation of livestock to farming conditions.

Des aliments à base de végétaux pour les poissons d'élevage

Genetic parameters of in-vivo prediction of carcass, head and fillet yields by internal ultrasound and 2D external imagery in large rainbow trout

Genotype by diet interactions in European sea bass (Dicentrarchus labrax L.): Nutritional challenge with totally plant-based diets

Heritabilities and correlations of deformities and growth related traits in the European sea bass (Dicentrarchus labrax, L.) in four different sites

The positive impact of the early-feeding of a plant-based diet on its future acceptance and utilisation in rainbow trout

Negative genetic correlations between production traits and head or bony tissues in large all-female rainbow trout (Oncorhynchus mykiss)

Selection for adaptation to dietary shifts: towards sustainable breeding of carnivorous fish

Comparison of isogenic lines provides evidence that phenotypic plasticity is under genetic control in rainbow trout Oncorhynchus mykiss

Minimizing maternal effect in salmonid families mixed since eyed stage and a posteriori DNA-pedigreed

Is avoiding full sib matings really worthwhile in a breeding program?

Plant-based diet in rainbow trout (Oncorhynchus mykiss Walbaum): Are there genotype-diet interactions for main production traits when fish are fed marine vs. plant-based diets from the first meal?

A first insight into genotype x diet interactions in European sea bass (Dicentrarchus labrax L. 1756) in the context of plant-based diet use

Population and family growth response to different rearing location, heritability estimates and genotype × environment interaction in the silver-lip pearl oyster (Pinctada maxima)

Genotype by environment interactions for growth in European seabass (Dicentrarchus labrax) are large when growth rate rather than weight is considered

Side effects of sexual maturation on heritability estimates in rainbow trout (Oncorhynchus mykiss)

Body proportions and chemical composition of wild and reared edible snails of Ivory coast

What is the heritable component of spinal deformities in the European sea bass (Dicentrarchus labrax)?

X-ray quantitative texture analysis on Helix aspersa aspera (Pulmonata) shells selected or not for increased weight

Genetic variation for carcass quality traits in cultured sea bass (Dicentrarchus labrax)

Response to domestication and selection for growth in the European sea bass (Dicentrarchus labrax) in separate and mixed tanks

Evidence of genotype-diet interactions in the response of rainbow trout (Oncorhynchus mykiss) clones to a diet with or without fishmeal at early growth

Scaling of metabolism in Helix aspersa snails: changes through ontogeny and response to selection for increased size.

Genetic variation for growth at one and two summers of age in the common carp (Cyprinus carpio L.): Heritability estimates and response to selection

Genetická variance růstu u kapra obecného (Cyprinus carpio L.) ve vĕku jednoho a dvou let: Odhady heritability a selekčni odzeva

Heritabilities and GxE interactions for growth in the European sea bass (Dicentrarchus labrax L.) using a marker-based pedigree

A polygenic hypothesis for sex determination in the European Sea Bass Dicentrarchus labrax.

Effects of photoperiod on growth and reproduction in Archachatina ventricosa (Gould, 1850) under indoor rearing conditions.

Estimates of heritability and genotype-environment interactions for body weight in sea bass (Dicentrarchus labrax L.) raised under communal rearing conditions.

An evaluation of allowing for mismatches as a way to manage genotyping errors in parentage assignment by exclusion.

Effect of different mating designs on inbreeding, genetic variance and response to selection when applying individual selection in fish breeding programs.

Does avoiding full sibs matings preserves genetic variability in a selection scheme? Case of single pair matings.

The edible snails of Côte d'Ivoire: effects of photoperiod on the growth and the reproduction performances of Achatina achatina (Linné, 1720) in indoor rearing.

Heritability estimates for growth-related traits using microsatellite parentage assignment in juvenile common carp (Cyprinus carpio L.).

Les escargots comestibles d'Afrique : effet de la teneur en calcium alimentaire sur les performances de croissance d'Achatina achatina (Linné, 1758).

Les escargots comestibles de Côte d'Ivoire: Effet de quelques plantes, d'aliments concentrés et de la teneur en calcium alimentaire sur la croissance d'Archachatina ventricosa Gould 1850 en élevage hors sol en bâtiment.

Evidence for genetic control of adult weight plasticity in the snail Helix aspersa