Rousseau-Gueutin Mathieu

Julie Ferreira de Carvalho, Solenn Stoeckel, Frédérique Eber, Maryse Lodé-Taburel, Marie-Madeleine Gilet, et al.. Untangling structural factors driving genome stabilization in nascent Brassica napus allopolyploids. New Phytologist, Wiley, 2021, 230 (5), pp.2072-2084. ⟨10.1111/nph.17308⟩. ⟨hal-03227311⟩

Benjamin Istace, Caroline Belser, Cyril Falentin, Karine Labadie, Franz Boideau, et al.. Sequencing and Chromosome-Scale Assembly of Plant Genomes, Brassica rapa as a Use Case. Biology, MDPI 2021, 10, ⟨10.3390/biology10080732⟩. ⟨hal-03318024⟩

Delphine Giraud, Oscar Lima, Mathieu Rousseau-Gueutin, Armel Salmon, Malika Ainouche. Gene and Transposable Element Expression Evolution Following Recent and Past Polyploidy Events in Spartina (Poaceae). Frontiers in Genetics, 2021, 12, ⟨10.3389/fgene.2021.589160⟩. ⟨hal-03216905⟩

Franz Boideau, Alexandre Pelé, Coleen Tanguy, Gwenn Trotoux, Frédérique Eber, et al.. A Modified Meiotic Recombination in Brassica napus Largely Improves Its Breeding Efficiency. Biology, MDPI 2021, 10 (8), pp.771. ⟨10.3390/biology10080771⟩. ⟨hal-03328112⟩

Anne-Marie Chèvre, Franz Boideau, Alexandre Pelé, Mathieu Rousseau-Gueutin. Une machine à recombiner chez les Brassica. Sélectionneur Français, 2020, 71 (71), pp.49-57. ⟨hal-03226364⟩

Julien Boutte, Loeiz Maillet, Thomas Chaussepied, Sébastien Letort, Jean-Marc Aury, et al.. Genome Size Variation and Comparative Genomics Reveal Intraspecific Diversity in Brassica rapa. Frontiers in Plant Science, Frontiers, 2020, 11, pp.577536. ⟨10.3389/fpls.2020.577536⟩. ⟨hal-03137565⟩

Thanina Azibi, Houria Hadj-Arab, Maryse Lodé-Taburel, Julie Ferreira de Carvalho, Gwenn Trotoux, et al.. Impact of whole genome triplication on the evolutionary history and the functional dynamics of regulatory genes involved in Brassica self-incompatibility signalling pathway. Sexual Plant Reproduction, Springer Verlag, 2020, 33 (1), pp.43-58. ⟨10.1007/s00497-020-00385-x⟩. ⟨hal-02784702⟩

Mathieu Rousseau-Gueutin, Caroline Belser, Corinne Da silva, Gautier Richard, Benjamin Istace, et al.. Long-read assembly of the Brassica napus reference genome Darmor-bzh. GigaScience, BioMed Central, 2020, 9 (12), pp.giaa137. ⟨10.1093/gigascience/giaa137⟩. ⟨hal-03283975⟩

Julie Ferreira de Carvalho, Jérémy Lucas, Gwenaëlle Deniot, Cyril Falentin, Olivier Filangi, et al.. Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole-genome duplications in Brassica. Plant Journal, Wiley, 2019, 98 (3), pp.434-447. ⟨10.1111/tpj.14228⟩. ⟨hal-02019346⟩

Alexandre Pelé, Mathieu Rousseau-Gueutin, Anne-Marie Chèvre. Speciation success of polyploid plants closely Relates to the regulation of meiotic recombination.. Frontiers in Plant Science, Frontiers, 2018, 9, ⟨10.3389/fpls.2018.00907⟩. ⟨hal-02626378⟩

F. Aissiou, Anne Laperche, Cyril Falentin, Maryse Lodé-Taburel, Gwenaëlle Deniot, et al.. A novel Brassica rapa L. genetic diversity found in Algeria. Euphytica, 2018, 214 (12), pp.241. ⟨10.1007/s10681-018-2318-9⟩. ⟨hal-02077529⟩

Caroline Belser, Benjamin Istace, Erwan Denis, Marion Dubarry, Franc-Christophe Baurens, et al.. Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps. Nature Plants, Nature Publishing Group, 2018, 4 (11), pp.879-887. ⟨10.1038/s41477-018-0289-4⟩. ⟨hal-01977046⟩

Katarzyna Adamczyk, Sabrina Delaunay, Anne Vannier, Caroline François, Gwénaëlle Thomas, et al.. Gene Introgression in Weeds Depends on Initial Gene Location in the Crop: Brassica napus - Raphanus raphanistrum Model. Genetics, Genetics Society of America, 2017, 206 (3), pp.1361-1372. ⟨10.1534/genetics.117.201715⟩. ⟨hal-01607924⟩

Alexandre Pelé, Gwenn Trotoux, Frederique Eber, Maryse Lodé-Taburel, Marie-Madeleine Gilet, et al.. The poor lonesome A subgenome of Brassica napus var. Darmor (AACC) may not survive without its mate.. New Phytologist, Wiley, 2017, 213 (4), pp.1886-1897. ⟨10.1111/nph.14147⟩. ⟨hal-01532711⟩

Hélène Rousseau, Mathieu Rousseau-Gueutin, Xavier Dauvergne, Julien Boutte, Gaëlle Simon, et al.. Evolution of DMSP (dimethylsulfoniopropionate) biosynthesis pathway: Origin and phylogenetic distribution in polyploid Spartina (Poaceae, Chloridoideae). Molecular Phylogenetics and Evolution, Elsevier, 2017, 114, pp.401-414. ⟨10.1016/j.ympev.2017.07.003⟩. ⟨hal-01579439⟩

Alexandre Pelé, Matthieu Falque, Gwenn Trotoux, Frederique Eber, Sylvie Negre, et al.. Amplifying recombination genome-wide and reshaping crossover landscapes in Brassicas.. PLoS Genetics, Public Library of Science, 2017, 13 (5), pp.e1006794. ⟨10.1371/journal.pgen.1006794⟩. ⟨hal-01607280⟩

Mathieu Rousseau-Gueutin, Jérôme Morice, Olivier Coriton, Virginie Huteau, Gwenn Trotoux, et al.. The impact of open pollination on the structural evolutionary dynamics, meiotic behavior, and fertility of resynthesized allotetraploid Brassica napus L.. G3, Genetics Society of America, 2017, 7 (2), pp.705-717. ⟨10.1534/g3.116.036517⟩. ⟨hal-01607894⟩

Anna Stein, Olivier Coriton, Mathieu Rousseau-Gueutin, Birgit Samans, Sarah V Schiessl, et al.. Mapping of homoeologous chromosome exchanges influencing quantitative trait variation in Brassica napus.. Plant Biotechnology Journal, Wiley, 2017, 15 (11), pp.1478-1489. ⟨10.1111/pbi.12732⟩. ⟨hal-01608092⟩

Jean Keller, Mathieu Rousseau-Gueutin, Guillaume E. Martin, Jérôme Morice, Julien Boutte, et al.. The evolutionary fate of the chloroplast and nuclear rps16 genes as revealed through the sequencing and comparative analyses of four novel legume chloroplast genomes from Lupinus. DNA Research, Oxford University Press (OUP), 2017, 24 (4), pp.343-358. ⟨10.1093/dnares/dsx006⟩. ⟨hal-01612869⟩

Annaliese S Mason, Mathieu Rousseau-Gueutin, Jérôme Morice, Philipp E Bayer, Naghmeh Besharat, et al.. Centromere Locations in Brassica A and C Genomes Revealed Through Half-Tetrad Analysis.. Genetics, Genetics Society of America, 2016, 202 (2), pp.513-23. ⟨10.1534/genetics.115.183210⟩. ⟨hal-01345819⟩

Anne-Marie Chèvre, Alexandre Pelé, Sophie Paillard, Mathieu Rousseau-Gueutin. Re-synthèse d’espèces : l’exemple du colza. Sélectionneur Français, 2016, 67 (67), pp.21-27. ⟨hal-01607867⟩

Julien Boutte, Benoît Aliaga, Oscar Lima, Julie Ferreira de Carvalho, Abdelkader Aïnouche, et al.. Haplotype Detection from Next-Generation Sequencing in High-Ploidy-Level Species: 45S rDNA Gene Copies in the Hexaploid Spartina maritima. G3, Genetics Society of America, 2016, 6 (1), pp.29--40. ⟨10.1534/g3.115.023242⟩. ⟨hal-01269912⟩

Julie Boutte, Julie Ferreira de Carvalho, Mathieu Rousseau-Gueutin, Julie Poulain, Corinne da Silva, et al.. Reference Transcriptomes and Detection of Duplicated Copies in Hexaploid and Allododecaploid Spartina Species (Poaceae). Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2016, 8 (9), pp.3030-3044. ⟨10.1093/gbe/evw209⟩. ⟨hal-01412081⟩

Anne-Sophie Bouchet, Anne Laperche, Christine Bissuel, Cécile Baron, Jérôme Morice, et al.. Genetic basis of nitrogen use efficiency and yield stability across environments in winter rapeseed. BMC Genetics, BioMed Central, 2016, 17 (1), pp.131. ⟨10.1186/s12863-016-0432-z⟩. ⟨hal-01462774⟩

Anne-Sophie Bouchet, Anne Laperche, Christine Bissuel, Cécile Baron, Jérôme Morice, et al.. Genetic basis of nitrogen use efficiency and yield stability across environments in winter rapeseed. BMC Genetics, BioMed Central, 2016, 17 (1), pp.131. ⟨10.1186/s12863-016-0432-z⟩. ⟨hal-01462774⟩

Alex Baumel, Mathieu Rousseau-Gueutin, C. Sapienza-Bianchi, Agnès Gareil, N. Duong, et al.. Spartina versicolor Fabre: Another case of Spartina trans-Atlantic introduction?. Biological Invasions, Springer Verlag, 2016, 18 (8), pp.2123-2135. ⟨10.1007/s10530-016-1128-z⟩. ⟨hal-01355664⟩

Mathieu Rousseau-Gueutin, Sidonie Bellot, Guillaume E. Martin, Julien Boutte, Houda Chelaifa, et al.. The chloroplast genome of the hexaploid Spartina maritima (Poaceae, Chloridoideae): Comparative analyses and molecular dating. Molecular Phylogenetics and Evolution, Elsevier, 2015, 93, pp.5-16. ⟨10.1016/j.ympev.2015.06.013⟩. ⟨hal-01187129⟩

Bernado Duarte, Alexandra Baeta, Mathieu Rousseau-Gueutin, Malika L. Ainouche, Joao Carlos Marques, et al.. A tale of two Spartinas: Climatic, photobiological and isotopic insights on the fitness of non-indigenous versus native species. Estuarine, Coastal and Shelf Science, Elsevier, 2015, 167, pp.178-190. ⟨10.1016/j.ecss.2015.06.015⟩. ⟨hal-01170439⟩

Mathieu Rousseau-Gueutin, Michael Ayliffe, Jeremy Timmis. Plastid DNA in the nucleus. Plant Signaling and Behavior, Taylor & Francis, 2014, 7 (2), pp.269-272. ⟨10.4161/psb.18762⟩. ⟨hal-03318154⟩

Guillaume E. Martin, Mathieu Rousseau-Gueutin, Solenn Cordonnier, Oscar Lima, Sophie Michon-Coudouel, et al.. The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in the legume family. Annals of Botany, Oxford University Press (OUP), 2014, 113 (7), pp.1197-1210. ⟨10.1093/aob/mcu050⟩. ⟨hal-01061902⟩

Mathieu Rousseau-Gueutin, Xun Huang, Emily Higginson, Michael Ayliffe, Anil Day, et al.. Potential Functional Replacement of the Plastidic Acetyl-CoA Carboxylase Subunit (accD) Gene by Recent Transfers to the Nucleus in Some Angiosperm Lineages. Plant Physiology, American Society of Plant Biologists, 2013, 161 (4), pp.1918-1929. ⟨10.1104/pp.113.214528⟩. ⟨hal-00834941⟩

Amélia Gaston, Justine Perrotte, Estelle Lerceteau-Köhler, Mathieu Rousseau-Gueutin, Aurélie Petit, et al.. PFRU, a single dominant locus regulates the balance between sexual and asexual plant reproduction in cultivated strawberry.. Journal of Experimental Botany, Oxford University Press (OUP), 2013, 64 (7), pp.1837-48. ⟨10.1093/jxb/ert047⟩. ⟨hal-02646133⟩

D. Wang, Mathieu Rousseau-Gueutin, J. Timmis. Plastid Sequences Contribute to Some Plant Mitochondrial Genes. Molecular Biology and Evolution, Oxford University Press (OUP), 2012, 29 (7), pp.1707-1711. ⟨10.1093/molbev/mss016⟩. ⟨hal-03318153⟩

Mathieu Rousseau-Gueutin, Laurent Richard, Loick Le Dantec, Henri Caron, Beatrice Denoyes-Rothan. Development, mapping and transferability of Fragaria EST-SSRs within the Rosodae supertribe. Plant Breeding, Wiley, 2011, 130 (2), pp.248-255. ⟨10.1111/j.1439-0523.2010.01785.x⟩. ⟨hal-02646384⟩

Mathieu Rousseau-Gueutin, Michael Ayliffe, Jeremy Timmis. Conservation of Plastid Sequences in the Plant Nuclear Genome for Millions of Years Facilitates Endosymbiotic Evolution. Plant Physiology, American Society of Plant Biologists, 2011, 157 (4), pp.2181-2193. ⟨10.1104/pp.111.185074⟩. ⟨hal-03318155⟩

Anne Pribat, Rodnay Sormani, Mathieu Rousseau-Gueutin, Magdalena M. Julkowska, Christa Testerink, et al.. A Novel Class of PTEN Protein in Arabidopsis displays Unusual Phosphoinositide Phosphatase Activity and Efficiently Binds Phosphatidic Acid.. Biochemical Journal, Portland Press, 2011, 441 (1), pp.161-171. ⟨10.1042/BJ20110776⟩. ⟨hal-00658162⟩

Mathieu Rousseau-Gueutin, A. Gaston, Abdelkader Aïnouche, Malika L. Aïnouche, K. Olbricht, et al.. Tracking the evolutionary history of polyploidy in Fragaria L. (strawberry): new insights from phylogenetic analyses of low-copy nuclear genes.. Molecular Phylogenetics and Evolution, Elsevier, 2009, 51 (3), pp.515-30. ⟨10.1016/j.ympev.2008.12.024⟩. ⟨hal-00406777⟩

Mathieu Rousseau-Gueutin, Estelle Lerceteau-Köhler, Laure Barrot, Daniel James Sargent, Amparo Monfort, et al.. Comparative genetic mapping between octoploid and diploid Fragaria species reveals a high level of colinearity between their genomes and the essentially disomic behavior of the cultivated octoploid strawberry. Genetics, Genetics Society of America, 2008, 179 (4), pp.2045-2060. ⟨10.1534/genetics.107.083840⟩. ⟨hal-02667890⟩

D.J. Sargent, Juliette Clarke, D.W. Simpson, K.R. Tobutt, Pere Arus, et al.. An enhanced microsatellite map of diploid Fragaria. TAG Theoretical and Applied Genetics, Springer Verlag, 2006, 112 (7), pp.1349-1359. ⟨10.1007/s00122-006-0237-y⟩. ⟨hal-02660931⟩

Mathieu Rousseau-Gueutin, J. F. Wendel. Barbara McClintock, a Pioneer in the Study of Polyploidy. Kass, Lee B. Perspectives on nobel laureate Barbara McClintock's publication (1926-1984): a companion volume., 2020. ⟨hal-03298407⟩

Mathieu Rousseau-Gueutin, Jean Keller, Julie Ferreira de Carvalho, Abdelkader Ainoüche, Guillaume Martin. The Intertwined Chloroplast and Nuclear Genome Coevolution in Plants. Plant Growth and Regulation - Alterations to Sustain Unfavorable Conditions, InTech Open, 2018, 978-1-78984-285-2. ⟨10.5772/intechopen.75673⟩. ⟨hal-02787510⟩

Andrew Lloyd, Mathieu Rousseau-Gueutin, Jeremy Timmis, Anna Sheppard, Michael Ayliffe. Promiscuous Organellar DNA. R. Bock; V. Knoop. Genomics of Chloroplasts and Mitochondria, Springer, 2012, Advances in Photosynthesis and Respiration, ⟨10.1007/978-94-007-2920-9_9⟩. ⟨hal-03318913⟩

Mathieu Rousseau-Gueutin, Andrew Lloyd, Anna Sheppard, Jeremy Timmis. Gene Transfer to the Nucleus. C.E. Bullerwell. Organelle Genetics, Springer Berlin Heidelberg, 2012, ⟨10.1007/978-3-642-22380-8_7⟩. ⟨hal-03318915⟩

Kevin M. Folta, Beatrice Denoyes-Rothan, Mathieu Rousseau-Gueutin, Philip J. Stewart. Strawberry. Part 2 : Genome composition, linkage maps and markers. Genetics, genomics and breeding of berries, Taylor and Francis, 2011, 978-1-57808-707-5. ⟨hal-02807494⟩

Mathieu Rousseau-Gueutin. Origine et évolution des génomes des espèces diploïdes et polyploïdes du genre Fragaria (fraisier). Sciences du Vivant [q-bio]. Université des Sciences et Technologies (Bordeaux 1), 2008. Français. ⟨tel-02815789⟩

Mathieu Rousseau-Gueutin, Jean-Marc Aury. Avancées sur l’amélioration de l’assemblage de la variété de colza Darmor via l’utilisation des dernières technologies de séquençage. 26e Carrefour de la sélection du colza, Jan 2020, Orléans, France. ⟨hal-03318169⟩

Mathieu Rousseau-Gueutin, Jérémy Lucas, France Denoeud, Julie Ferreira de Carvalho, Zhesi He, et al.. Structural and functional evolutionary dynamics of duplicated genes and genomes in nascent and natural B. napus. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2019, Saint-Malo, France. ⟨hal-03318226⟩

Malika L. Ainouche, Delphine Giraud, Armand Cavé-Radet, Julien Boutte, Oscar Lima, et al.. Spartina alterniflora genome evolution and gene expression under stress (pollution) conditions. International Symposium on Spartina alterniflora: Dispersion, Control and Utilization, East China Normal University, Oct 2019, Shanghai, China. ⟨hal-02442222⟩

Franz Boideau, Cyril Falentin, Virginie Huteau, Gwenn Trotoux, Maryse Lodé-Taburel, et al.. From hills to mountains: modifying the recombination landscape in Brassica AAC allotriploids. EMBO meiosis. EMBO Meiosis, 2019, La Rochelle, France. ⟨hal-03318174⟩

Franz Boideau, Gwenn Trotoux, Loeiz Maillet, Virginie Huteau, Maryse Lodé-Taburel, et al.. From hills to mountains: modifying the recombination landscape in Brassica AAC allotriploids. Dynamique des génomes végétaux, 2019, Bordeaux, France. ⟨hal-03318186⟩

Mathieu Rousseau-Gueutin, Julie Ferreira de Carvalho, Jérémy Lucas, Gwenaëlle Deniot, Cyril Falentin, et al.. Co-evolution of chloroplast and nuclear genomes in flowering plants and impact of allopolyploidy on fine tune cytonuclear interactions.. International Conference on Polyploidy, Jun 2019, Ghent, Belgium. ⟨hal-03318182⟩

Mathieu Rousseau-Gueutin, Julie Ferreira de Carvalho, Solenn Stoeckel, Jérôme Morice, Marie-Madeleine Gilet, et al.. Impact of structural variations on the meiotic stability and plant fertility of the allotetraploid B. napus (oilseed rape). Second Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France. ⟨hal-03318231⟩

Julie Ferreira de Carvalho, Jérémy Lucas, Cyril Falentin, Gwenaëlle Deniot, Olivier Filangi, et al.. Cytonuclear interactions overcome inter-genomic conflict resulting from interspecific hybridization and genome doubling. Second Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France. ⟨hal-03318235⟩

Armel Salmon, Armand Cavé-Radet, Delphine Giraud, Julien Boutte, Hélène Rousseau, et al.. New traits in Spartina species: A consequence of hybridizations and/or polyploidy?. PAG XXVI Plant and Animal Genome Conference, Jan 2018, San Diego, United States. ⟨hal-02441057⟩

Malika L. Aïnouche, Armand Cavé-Radet, Delphine Giraud, Alex Baumel, Blanca Gallego-Tévar, et al.. Genome merger and duplication as springboards for plant invasion: Lessons from Spartina. International Conference on Ecological Sciences, SFEcologie2018, SFEcologie, Oct 2018, Rennes, France. ⟨hal-02436817⟩

Alexandre Pelé, Franz Boideau, Maryse Lodé-Taburel, Gwenn Trotoux, Frederique Eber, et al.. Brassica allotriploids, a solution to deal with hampered meiotic recombination.. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2018, Saint-Malo, France. ⟨hal-03318165⟩

Alexandre Pelé, Franz Boideau, Maryse Lodé-Taburel, Gwenn Trotoux, Frederique Eber, et al.. Brassica allotriploids, a solution to deal with hampered meiotic recombination. 21st Crucifer Genetics Conference, Jul 2018, Saint-Malo, France. ⟨hal-03226348⟩

Sophie Paillard, Maryse Lodé-Taburel, Gwenn Trotoux, Frederique Eber, Marie-Madeleine Gilet, et al.. From diploids to a huge diversity ready-to-use for oilseed rape breeding.. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2018, Saint-Malo, France. ⟨hal-03318160⟩

Mathieu Rousseau-Gueutin, Julie Ferreira de Carvalho, J. Lucas, F. Denoued, Fabrice Legeai, et al.. How a polyploid becomes a new species: example from the Brassica model.. International Conference on Environmental and Agronomical Genomics, 2018, Paris, France. ⟨hal-03318223⟩

Julie Ferreira de Carvalho, Thomas Chaussepied, Sébastien Letort, Anne-Marie Chèvre, Mathieu Rousseau-Gueutin. Structural and functional consequences of transposable elements after multiple Whole-Genome Duplication events. Dynamique des Génomes végétaux, 2018, Rennes, France. ⟨hal-03318224⟩

Armel Salmon, Armand Cavé-Radet, Delphine Giraud, Julien Boutte, Oscar Lima, et al.. Epigenetics and stress tolerance in polyploid Spartina (Poaceae). SFEcologie2018 International Conference on Ecological Sciences, SFEcologie, Oct 2018, Rennes, France. ⟨hal-02440871⟩

F. Aïssiou, Cyril Falentin, Anne Laperche, Mathieu Rousseau-Gueutin, Anne-Marie Chèvre, et al.. Brassica rapa genetic resources from Algeria: diversity and population structure based on SSR markers. Dynamique des génomes végétaux, 2017, Toulouse, France. ⟨hal-03318391⟩

Alexandre Pelé, Matthieu Falque, Gwenn Trotoux, Frederique Eber, Sylvie Negre, et al.. New insights on homologous recombination in polyploids: the striking case of Brassica allotriploids. Dynamique des Génomes Végétaux, Jun 2017, Montpellier, France. ⟨hal-03226419⟩

Mathieu Rousseau-Gueutin, Jean Keller, Guillaume E. Martin, Jérôme Morice, Julien Boutte, et al.. Endosymbiosis and the evolutionary fate of genes duplicated in different cellular compartments. Workshop DYNAGEV2017, Jun 2017, Montpellier, France. ⟨hal-02434802⟩

Armel Salmon, Hélène Rousseau, Julien Boutte, Oscar Lima, Mathieu Rousseau-Gueutin, et al.. Détection des homéologues au sein des génomes polyploïdes par capture de séquence : applications chez le cotonnier (Gossypium hirsutum) et les spartines (Spartina sp.). Journée « Capture de gènes » GDR 3692 CNRS-INRA Génomique Environnementale, May 2016, Paris, France. ⟨hal-02428285⟩

Malika L. Aïnouche, Alex Baumel, Blanca Gallego-Tévar, Jesus Castillo, Mathieu Rousseau-Gueutin, et al.. Unending hybridization and polyploid speciation stories: Lessons from Spartina (Poaceae). XV OPTIMA Meeting, Organization for the Phyto-Taxonomic Investigation of the Mediterranean Area, Jun 2016, Montpellier, France. ⟨hal-02422822⟩

Delphine Giraud, Julien Boutte, Mathieu Rousseau-Gueutin, Malika L. Aïnouche, Armel Salmon. Interspecific hybridization, polyploidy and evolution of orthologous gene expression in Spartina species. Réunion du réseau DYNAGEV 2016, Jul 2016, Paris, France. ⟨hal-02423210⟩

Armel Salmon, Julien Boutte, Hélène Rousseau, Yvon Le Bras, Mathieu Rousseau-Gueutin, et al.. How to detect duplicated sequences within highly polyploid species without any reference? An introduction to the use of the Pyro- and Illu-haplotyper pipelines for Spartina genomics. International Conference on Hybridization and Polyploidy (ICPHB-2016), Apr 2016, Rovinj, Croatia. ⟨hal-02428378⟩

Hélène Rousseau, Xavier Dauvergne, Julien Boutte, Nathalie Marnet, Alain Bouchereau, et al.. Polyploidy and phenotypic novelty: Phylogenetic context of DMSP (dimethylsulfoniopropionate) biosynthesis in Spartina (Poaceae, Chloridoideae). International Conference on Pllyploidy, Hybridization and Biodiversity, Sep 2016, Rovinj, Croatia. ⟨hal-02427542⟩

Alexandre Pelé, Gwenn Trotoux, Frederique Eber, Sylvie Negre, Maryse Lodé-Taburel, et al.. Brassica Allotriploids Hybrids: New Way to Exceed Recombination Limits for COs Rate and Distribution. Plant & Animal Genome Conference XXIV, Jan 2016, San Diego, CA, United States. ⟨hal-03226320⟩

Alexandre Pelé, Gwenn Trotoux, Frederique Eber, Sylvie Negre, Jérôme Morice, et al.. The poor lonesome Brassica napus A subgenome may not survive without its mate. International Conference on Polyploidy, Hybridization and Biodiversity, May 2016, Rovinj, Croatia. ⟨10.13140/RG.2.2.19783.42408⟩. ⟨hal-03226308⟩

Malika L. Aïnouche, Houda Chelaifa, Mathieu Rousseau-Gueutin, Julien Boutte, Hélène Rousseau, et al.. Genome merger as evolutionary springboard: Insights from recurrent hybridization and polyploidy in Spartina. International Conference on Hybridization and Polyploidy (ICPHB-2016), Apr 2016, Rovinj, Croatia. ⟨hal-02422781⟩

Alexandre Pelé, Gwenn Trotoux, Frederique Eber, Sylvie Negre, Jérôme Morice, et al.. Can a lonesome poor A genome of Brassica napus survive at diploid stage?. 14th International Rapeseed Congress, Jul 2015, Saskatoon, SK, Canada. ⟨hal-03226287⟩

Malika Ainouche, Mathieu Rousseau-Gueutin, Hélène Rousseau, Julien Boutte, Sidonie Bellot, et al.. Polyploidy, genome evolution and functional novelty in genus SpartinaI (Poaceae). International Conference « Evolution of Plant Phenotypes: from genomes to traits », Mar 2015, Barcelone, Spain. ⟨hal-01162082⟩

Armel Salmon, Julien Boutte, Julie Ferreira de Carvalho, Mathieu Rousseau-Gueutin, Malika Ainouche. The challenges of genomics in polyploidy Spartina species: How to deal with hybrid genomes and high redundancy?. PAG XXIII Plant and Animal Genome Conference, Jan 2015, San Diego, United States. ⟨hal-01162085⟩

Jean Keller, Mathieu Rousseau-Gueutin, Guillaume E. Martin, Francisco Cabello-Hurtado, J. Morice, et al.. Comparative analysis of five chloroplast genomes in the legume genus Lupinus. First workshop on Plant Genome Dynamics and Evolution, May 2015, Toulouse, France. ⟨hal-01162537⟩

Gwenn Trotoux, Alexandre Pelé, Frederique Eber, Sylvie Negre, Jérôme Morice, et al.. Extracting the A genome from oilseed rape. Dynamique des génomes végétaux, 2015, Toulouse, France. ⟨hal-03318390⟩

Armel Salmon, Julien Boutte, Julie Ferreira de Carvalho, Mathieu Rousseau-Gueutin, Malika L. Aïnouche. The challenges of genomics in polyploidy Spartina species: How to deal with hybrid genomes and high redundancy?. PAG XXIII Plant and Animal Genome Conference, Jan 2015, San Diego, United States. ⟨hal-02422739⟩

Hélène Rousseau, Mathieu Rousseau-Gueutin, Xavier Dauvergne, Morgane Gicquel, Francisco Cabello-Hurtado, et al.. Polyploidy and functional novelty: Origin of the DMSP production in genus Spartina (Poaceae). Réunion du groupe « Cytogénétique et Polyploïdie", May 2014, Clermont Ferrand, France. ⟨hal-01089324⟩

Malika Ainouche, Julie Ferreira de Carvalho, Julien Boutte, Sidonie Bellot, Mathieu Rousseau-Gueutin, et al.. Recurrent polyploidy in the salt marsh genus Spartina: Lessons and challenges. PAG XXII Plant and Animal Genome Conference, Jan 2014, San Diego, United States. 1 p. ⟨hal-01108383⟩

Armel Salmon, Julien Boutte, Julie Ferreira de Carvalho, Mathieu Rousseau-Gueutin, Malika Ainouche. The challenges of genomics in polyploid Spartina species: How to deal with hydrid genomes and high redundancy?. International Conference on Invasive Spartina 2014, Jul 2014, Rennes, France. ⟨hal-01108413⟩

Malika Ainouche, Armel Salmon, Mathieu Rousseau-Gueutin, Julien Boutte, Hélène Rousseau, et al.. Hybridation, polyploidie et evolution des génomes : le cas des spartines envahissant les marais salés. Colloque de lancement du Groupement de Recherches CNRS « Invasions Biologiques », UMR CNRS 6553 ECOBIO, Oct 2014, Rennes, France. ⟨hal-01108368⟩

Carine Charron, Mathieu Rousseau-Gueutin, Julie Ferreira de Carvalho, Houda Chelaifa, Julien Boutte, et al.. Bac sequencing analyses in the hexaploid Spartina maritime (Poaceae): Homoeolog divergence and microsynteny in the grass family. Réunion du groupe « Cytogénétique et Polyploïdie », May 2014, Clermont-Ferrand, France. ⟨hal-01108395⟩

Malika Ainouche, Houda Chelaifa, Julie Ferreira de Carvalho, Julien Boutte, Sidonie Bellot, et al.. Polyploidy speciation and genome evolution: Lessons from recent allopolyploids. XVIIth Evolutionary Biology Meeting, Sep 2013, Marseille, France. ⟨hal-01108428⟩

Mathieu Rousseau-Gueutin, Guillaume Martin, Solene Cordonnier, Oscar Lima, Sophie Michon-Coudouel, et al.. Evolutionary dynamics of the chloroplast genome: Insights from comparative analyses in the legume family. Colloque « Génomique Environnementale », Nov 2013, Rennes, France. ⟨hal-01108884⟩

Beatrice Denoyes-Rothan, Mathieu Rousseau-Gueutin, Amélia Gaston, Abdelkader Ainoüche, Malika Ainouche, et al.. Reconstructing the evolutionary history of Fragaria (Strawberry) : polyploids from phylogenetic analyses of low-copy nuclear genes. Plant and Animal Genome XVIII Conference, Jan 2009, San Diego, Canada. 23 p. ⟨hal-02820156⟩

Rodnay Sormani, Anne Pribat, Mathieu Rousseau-Gueutin, Jean-Pierre Renou, Christian Meyer, et al.. Over expression of a plant homolog of the human tumor suppressor PTEN leads to flower sterility. 20. International Conference on Arabidopsis Research (ICAR), Jun 2009, Edinburgh, United Kingdom. ⟨hal-01204041⟩

Amélia Gaston, E. Lerceteau-Köhler, Laure Barrot, Aurélie Petit, Mathieu Rousseau-Gueutin, et al.. Variation of genetic dissection of seasonal vs recurrent flowering according to year in the cultivated strawberry. Workshop on "Berry production in changing climate conditions and cultivation systems", Oct 2008, Geisenheim, Germany. 1 p. ⟨hal-02820953⟩

Beatrice Denoyes-Rothan, Mathieu Rousseau-Gueutin, Amélia Gaston, Daniel Roca, Nicole Pedeprat, et al.. Use of a reference octoploid map for detecting homoeologous QTLs potentially involved in viability in the cultivated strawberry. 6. International Strawberry Symposium ISHS, Mar 2008, Huelva, Spain. ⟨hal-02757770⟩

Beatrice Denoyes-Rothan, Mathieu Rousseau-Gueutin, Daniel Roca, Nicole Pedeprat, L. Barrot, et al.. Use of a reference octoploid map for detecting homoeologous QTLs. 6. International Strawberry Symposium ISHS, Mar 2008, Huelva, Spain. 1 p. ⟨hal-02815615⟩

Beatrice Denoyes-Rothan, E. Lerceteau-Köhler, Mathieu Rousseau-Gueutin, Annick Moing, Christel Renaud. Polyploidy and its consequence on QTL detection on fruit quality compounds. Workshop on Bioactive compounds in berry fruits : genetic control, breedin, cultivar, analytical aspects and human health, Dec 2008, Zurich, Switzerland. 1 p. ⟨hal-02818681⟩

Mathieu Rousseau-Gueutin, Amèlia Gaston, Abdelkader Ainouche, Malika L. Ainouche, Klaus Olbricht, et al.. Elucidating the origin and evolution of a complex polyploid genus (e.g.: Fragaria) by using low-copy nuclear genes in a phylogenetical study. Evolutionary Biology Meeting, 2007, Marseille, France. ⟨hal-03318365⟩

Beatrice Desnoyes-Rothan, Mathieu Rousseau-Gueutin, L. Barrot, E. Lerceteau-Köhler, D. Sargent, et al.. Comparative the linkage maps of two levels of ploidy in Fragaria. 14. Plant and Animal Genome, Jan 2006, San Diego, United States. 1 p. ⟨hal-02821397⟩

Mathieu Rousseau-Gueutin, Laure Barrot, Estelle Lerceteau-Köhler, Daniel Sargent, David Simpson, et al.. Genetic map of the octoploid cultivated strawberry genome and synteny with one relative diploid genome. Cytogénétique et Polyploïdie, 2005, rennes, France. ⟨hal-03318368⟩

Franz Boideau, Virginie Huteau, Cyril Falentin, Gwenn Trotoux, Maryse Lodé-Taburel, et al.. Modifications of recombination rules by changing the ploidy level: Brassica model. International Conference on Polyploidy, Jun 2019, Ghent, Belgium. ⟨hal-03318199⟩

Julie Ferreira de Carvalho, Julien Boutte, Loeiz Maillet, Thomas Chaussepied, Sébastien Letort, et al.. Functional consequences of transposable elements on duplicated gene transcription and retention in polyploid Brassica species. International Conference on Polyploidy, Jun 2019, Ghent, Belgium. ⟨hal-03318194⟩

Gwenn Trotoux, Mathieu Rousseau-Gueutin, Anne-Marie Chèvre. Assessment of pollen size according to ploidy level in Brassica model.. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2018, Saint-Malo, France. ⟨hal-03318380⟩

F. Aïssiou, Mathieu Rousseau-Gueutin, Anne Laperche, Cyril Falentin, Maryse Lodé-Taburel, et al.. New insights into the genetic diversity and reproduction of Brassica rapa L.. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2018, Saint-Malo, France. ⟨hal-03318382⟩

Thanina Azibi, Mathieu Rousseau-Gueutin, Gwenn Trotoux, Maryse Lodé-Taburel, Julie Ferreira de Carvalho, et al.. Shift to self-compatibility in synthetic allopolyploid Brassica napus. 21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2018, Saint-Malo, France. ⟨hal-03318239⟩

Caroline Belser, Bejamin Istace, Denis Engemann, M Dubarry, Cyril Falentin, et al.. Chromosome-scale assemblies of Brassica oleracea and Brassica rapa using nanopore long reads and optical maps. 21st Crucifer Genetics Conference on Brassica - Bassica 2018, Jul 2018, Saint-Malo, France. ⟨hal-03318378⟩

Anna Stein, Birgit Samans, Ian Bancroft, Mathieu Rousseau-Gueutin, Anne-Marie Chèvre, et al.. Copy number variation generated by homeologous rearrangement creates phenotypic diversity. 14th International Rapeseed Congress, Jul 2015, Saskatoon, Canada. ⟨hal-03318383⟩

Mathieu Rousseau-Gueutin, Sidonie Bellot, Guillaume Martin, Julien Boutte, Houda Chelaifa, et al.. The complete chloroplast genome of Spartina maritima: Insights from comparative analyses in the Poaceae family and molecular dating between polyploidy lineages. International Conference on Invasive Spartina 2014, Jul 2014, Rennes, France. ⟨hal-01109677⟩

Carine Charron, Mathieu Rousseau-Gueutin, Julie Ferreira de Carvalho, Houda Chelaifa, Julien Boutte, et al.. Bac sequencing analyses in the hexaploid Spartina maritime (Poaceae): Homoeolog divergence and microsynteny in the grass family. International Conference on Invasive Spartina 2014, Jul 2014, Rennes, France. 1 p., 2014. ⟨hal-01109652⟩

Sidonie Bellot, Mathieu Rousseau-Gueutin, Guillaume Martin, Julien Boutte, Houda Chelaifa, et al.. The complete chloroplast genome of Spartina maritima: insights from comparative analyses in the Poaceae family and molecular dating. Génomique environnementale, 2013, Rennes, France. ⟨hal-03318241⟩

Julie Ferreira de Carvalho, Carine Charron, Houda Chelaifa, Julien Boutte, Mathieu Rousseau-Gueutin, et al.. The hexaploid Spartina maritime (Poaceae, Chloridoidea) genome: Composition and evolution in the grass family. Plant Genome Evolution Meeting, Sep 2013, Amsterdam, Netherlands. 2013. ⟨hal-01110188⟩

Mathieu Rousseau-Gueutin, Emily Higginson, Anil Day, Michael A. Ayliffe, Jeremy N. Timmis. Characterization and evolution of a chloroplastic gene functionally transferred to the nucleus. Plant and Animal Genomes Conference, 2012, San Diego, United States. ⟨hal-03318244⟩

Amélia Gaston-Dauzon, Aurélie Petit, Estelle Lerceteau-Köhler, Laure Barrot, Mathieu Rousseau-Gueutin, et al.. How strawberry can initiate continuous flowering: the genetic dissection of an agronomical interest trait, continuously-flowering in Fragaria x ananassa. INternational conference on molecular aspect of plant development, Feb 2010, Vienne, Austria. 2010. ⟨hal-02822724⟩

Amèlia Gaston, A. Petit, E. Lerceteau-Köhler, L. Barrot, Mathieu Rousseau-Gueutin, et al.. Comparative quantitative trait locus (QTL) suggests polyploidization in Fragaria led to different genetic keys for recurrent flowering in Fragaria. International conference on polyploidy, hybridization and biodiversity, May 2009, Saint-Malo, France. 1 p., 2009. ⟨hal-02817428⟩

Mathieu Rousseau-Gueutin, Amélia Gaston, Laurent Richard, Beatrice Denoyes-Rothan, K. Olbricht, et al.. Origin and evolution of wild Fragaria species. 6. International Strawberry Symposium ISHS, Mar 2008, Huelva, Spain. 2 p., 2008. ⟨hal-02819685⟩

Amèlia Gaston, Estelle Lerceteau-Köhler, Laure Barreau, Aurélie Petit, Sadia Schafleitner, et al.. Genetic dissection of seasonal vs recurrent flowering for better management of the production of fruits in the cultivated strawberry. 4. European plant science organisation (EPSO) conference "Plant for life", Jun 2008, Toulon, France. 1 p., 2008. ⟨hal-02815726⟩

L. Barrot, A. Petit, Mathieu Rousseau-Gueutin, Daniel Roca, Beatrice Denoyes-Rothan. Impact of plant breeding on genetic diversity of the cultivated strawberry Fragaria x ananassa. 6. International Strawberry Symposium ISHS, Mar 2008, Huelva, Spain. 2 p., 2008. ⟨hal-02823149⟩

Mathieu Rousseau-Gueutin, Laurence Hibrand-Saint Oyant, Fabrice Foucher, Laure Barrot, David Lalanne, et al.. Comparative mapping in the Rosoideae tribe: Fragaria and Rosa.. Third international Rosaceae genomics conference, Mar 2006, Napier, New Zealand. ⟨hal-03318366⟩

Mathieu Rousseau-Gueutin, Olivier Coriton, Frederique Eber, Eric Jenczewski, Boulos Chalhoub, et al.. Identification of genome specific markers in oilseed rape. Joint meeting of the 14th Crucifer Genetics Workshop and the 4th ISHS Symposium on Brassicas, 2004, Daejeon, South Korea. ⟨hal-03318372⟩