Mathieu Besson

Documents

Publications

	Changes in transcriptomic and behavioural traits in activity and ventilation rates associated with divergent individual feed efficiency in gilthead sea bream (Sparus aurata) Josep Calduch-Giner , Enrique Rosell-Moll , Mathieu Besson , Alain Vergnet , Jean-Sébastien Bruant Aquaculture Reports, 2023, 29, pp.101476. ⟨10.1016/j.aqrep.2023.101476⟩ Article dans une revue hal-03948385v1
	Whole‐genome sequencing identifies interferon-induced protein IFI6/IFI27-like as a strong candidate gene for VNN resistance in European sea bass Emilie Delpuech , Marc Vandeputte , Romain Morvezen , Anastasia Bestin , Mathieu Besson Genetics Selection Evolution, 2023, 55, pp.30. ⟨10.1186/s12711-023-00805-2⟩ Article dans une revue hal-04116035v1
	Potential for genomic selection on feed efficiency in gilthead sea bream (Sparus aurata), based on individual feed conversion ratio, carcass and lipid traits Mathieu Besson , Nicky Rombout , Germain Salou , Alain Vergnet , Sophie Cariou Aquaculture Reports, 2022, 24, ⟨10.1016/j.aqrep.2022.101132⟩ Article dans une revue hal-03679214v1
	An investigation of links between metabolic rate and feed efficiency in European sea bass Dicentrarchus labrax Charles Rodde , Hugues de Verdal , Marc Vandeputte , François Allal , Julie Nati Journal of Animal Science, 2021, 99 (6), pp.1-9. ⟨10.1093/jas/skab152⟩ Article dans une revue hal-03360566v1
	The genetic correlation between feed conversion ratio and growth rate affects the design of a breeding program for more sustainable fish production Mathieu Besson , Hans Komen , Gus Rose , Marc Vandeputte Genetics Selection Evolution, 2020, 52 (1), pp.5. ⟨10.1186/s12711-020-0524-0⟩ Article dans une revue hal-02472099v1
	Population, Temperature and Feeding Rate Effects on Individual Feed Efficiency in European Sea Bass (Dicentrarchus labrax) Charles Rodde , Marc Vandeputte , François Allal , Mathieu Besson , Frédéric Clota Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.578976⟩ Article dans une revue hal-03150873v1
	Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota Frontiers in Genetics, 2019, 10, pp.1-14. ⟨10.3389/fgene.2019.00219⟩ Article dans une revue hal-02403255v1
	Derivation of economic values for production traits in aquaculture species Kasper Janssen , Paul Berentsen , Mathieu Besson , Hans Komen Genetics Selection Evolution, 2017, 49 (1), pp.5. ⟨10.1186/s12711-016-0278-x⟩ Article dans une revue hal-01479138v1
	Economic values of growth rate, feed intake, feed conversion ratio, mortality and uniformity for Nile tilapia S. K. Omasaki , K. Janssen , Mathieu Besson , H. Komen Aquaculture, 2017, 481, pp.124-132. ⟨10.1016/j.aquaculture.2017.04.013⟩ Article dans une revue hal-02625124v1
	Effect of production quotas on economic and environmental values of growth rate and feed efficiency in sea cage fish farming Mathieu Besson , I.J.M. de Boer , Marc Vandeputte , J.A.M. van Arendonk , Edwige Quillet PLoS ONE, 2017, 12 (3), pp.1-15. ⟨10.1371/journal.pone.0173131⟩ Article dans une revue hal-01606037v1
	Environmental impacts of genetic improvement of growth rate and feed conversion ratio in fish farming under rearing density and nitrogen output limitations Mathieu Besson , Joël Aubin , H. Komen , M. Poelman , Edwige Quillet Journal of Cleaner Production, 2016, 116, pp.100-109. ⟨10.1016/j.jclepro.2015.12.084⟩ Article dans une revue hal-01461081v1
	Influence of water temperature on the economic value of growth rate in fish farming: The case of sea bass (Dicentrarchus labrax) cage farming in the Mediterranean Mathieu Besson , Marc Vandeputte , J.A.M. van Arendonk , Joël Aubin , I.J.M. de Boer Aquaculture, 2016, 462, pp.47-55. ⟨10.1016/j.aquaculture.2016.04.030⟩ Article dans une revue hal-02637880v1
	Economic values of growth and feed efficiency for fish farming in recirculating aquaculture system with density and nitrogen output limitations: a case study with African catfish ([i]Clarias gariepinus[/i]) Mathieu Besson , H. Komen , Joël Aubin , I.J.M. de Boer , M. Poelman Journal of Animal Science, 2014, 92 (12), pp.5394-5405. ⟨10.2527/jas.2014-8266⟩ Article dans une revue hal-01194061v1

	AN R-BASED PIPELINE FOR GENOTYPE CALLING AND PARENTAGE ASSIGNMENT OF TRIPLOID OFFSPRING TO THEIR DIPLOID PARENTS Mathieu Besson , Julien Roche , Pierre Patrice , Pierrick Haffray , François Allal Aquaculture Europe 2023, Sep 2023, Vienne, Austria Communication dans un congrès hal-04385840v1
	Genotype by environment interaction explain sex determination in the European Seabass Benjamin Geffroy , Mathieu Besson , Núria Sánchez-Baizán , Frédéric Clota , Alexander Goikoetxea 12th International Symposium on Reproductive Physiology of Fish, May 2023, Hersonisos - Crète, Greece Communication dans un congrès hal-04185947v1
	Can we combine genetics and a two-step temperature control to move towards monosex European seabass Dicentrarchus labrax? Marc Vandeputte , Frédéric Clota , Alain Vergnet , Marie-Odile Blanc , Stéphane Lallement Aquaculture Europe 2022, Sep 2022, Rimini, Italy Communication dans un congrès hal-04185712v1
	Can genomics improve the selection efficiency of sea bream (Sparus aurata) candidates reared in sanitary protected RAS when GxE exist with the production environment in open-sea cages? Anastasia Bestin , Jonathan D’ambrosio , Mathieu Besson , F Massieu , Alain Vergnet XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile Communication dans un congrès hal-04185868v1
	Réduction du coût de la sélection génomique par utilisation de panels à plus faible densité de marqueurs chez le bar et la daurade Jonathan D’ambrosio , Mathieu Besson , Anastasia Bestin , Jean-Sébastien Bruant , Aline Bajek 7. Journées de la Recherche Piscicole, Jul 2022, Paris, France Communication dans un congrès anses-03889117v1
	WHOLE GENOME SEQUENCING TO REFINE THE DETECTION OF QTL FOR VIRAL NERVOUS NECROSIS IN EUROPEAN SEA BASS (DICENTRARCHUS LABRAX) Emilie Delpuech , Marc Vandeputte , Florence Phocas , Anastasia Bestin , Mathieu Besson 6th symposium on Genomics in Aquaculture Symposium, May 2022, Grenade, Spain Communication dans un congrès hal-04116026v1
	Cartographie fine de la résistance à la nécrose nerveuse virale chez le bar identifiée par séquençage du génome entier Emilie Delpuech , Marc Vandeputte , Florence Phocas , Yoannah François , Anastasia Bestin 7èmes Journées Recherche Filière Piscicole, Jul 2022, Paris, France Communication dans un congrès hal-04185459v1
	Improving feed efficiency in fish: let’s get down to business François Allal , Mathieu Besson , Alain Vergnet , David J Mckenzie , Frédéric Clota Aquaculture Europe 2022, Sep 2022, Rimini, Italy Communication dans un congrès hal-04185734v1
	IFI6, an interferon alpha induced protein, identified by whole genome sequencing as involved in Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax) Emilie Delpuech , Marc Vandeputte , Romain Morvezen , Anastasia Bestin , Mathieu Besson International Symposium on Genetics in Aquaculture XIV, Nov 2022, Puerto Varas, Chile Communication dans un congrès hal-04185918v1
	Combined genomic approaches to unravel sex determination in the European seabass François Allal , Mathieu Besson , Núria Sánchez-Baizán , Frédéric Clota , Alexander Goikoetxea 6. Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain Communication dans un congrès hal-04185371v1
	Fine mapping for Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax) identified by whole genome sequencing Emilie Delpuech , Marc Vandeputte , Florence Phocas , Anastasia Bestin , Mathieu Besson Aquaculture Europe 2022, Sep 2022, Rimini, Italy Communication dans un congrès hal-04185721v1
	Phenotypic and genomic correlations between feed efficiency and metabolic traits in European sea bass Mathieu Besson , David J Mckenzie , Julie J.H Nati , Salou Germain , Alain Vergnet Aquaculture Europe 2021, Oct 2021, Funchal, Portugal Communication dans un congrès hal-03360559v1
	Genomic prediction and genotype-by-temperature interaction of sex tendency in European sea bass. François Allal , Mathieu Besson , Bastien Sadoul , François Ruelle , Pegart Mako Aquaculture Europe 2021, Oct 2021, Funchal, Portugal Communication dans un congrès hal-03360554v1
	Genetic correlations between processing traits and individual feed efficiency in a gilthead sea bream (Sparus aurata) commercial line Anastasia Bestin , Mathieu Besson , Alain Vergnet , François Allal , Frédéric Clota Aquaculture Europe 2021, Oct 2021, Funchal, Portugal Communication dans un congrès hal-03360548v1
	Améliorer l'efficacité alimentaire des poissons en utilisant une nouvelle méthode de phénotypage en aquarium individuel Mathieu Besson , François Allal , Alain Vergnet , Frédéric Clota , Sophie Cariou 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France Communication dans un congrès hal-02264927v1
	Accounting for genetic variability in fitness-related traits using a Dynamic Energy Budget model, an example on European Seabass Mathieu Besson , Marc Vandeputte , François Allal , Patrick Prunet , Marie-Laure Bégout 6. International Symposium and Thematic School on ‘Dynamic energy Budget theory for metabolic organization’ (DEB2019), Apr 2019, Brest, France. pp.47 Communication dans un congrès hal-03187437v1
	Sélection du bar pour l’efficacité alimentaire: on y arrive Mathieu Besson , Francois Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota Journée du SFAM, Mar 2018, Montpellier, France Communication dans un congrès hal-03156814v1
	Estimation of genetic parameters of feed conversion ratio based on individual phenotypes in sea bass Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota 11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand Communication dans un congrès hal-03156802v1
	Selective breeding on tolerance to fasting improves feed conversion ratio of sea bass Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota AQUA 2018, Aug 2018, Montpellier, France Communication dans un congrès hal-03187434v1
	Genetic improvement of feed conversion ratio in sea bass : new approach based on individual phenotypes and genomic info Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota Genetics and Breeding in Aquaculture: North meets South, May 2018, Bergen, Norway Communication dans un congrès hal-03156894v1
	Efficacité d’une sélection pour la résistance au jeûne François Allal , Marc Vandeputte , Alain Vergnet , Frédéric Clota , Mathieu Besson Journées Techniques du Sysaaf, Dec 2017, Rennes, France Communication dans un congrès hal-03156744v1
	Using the right breeding objective can decrease environmental impacts and increase farm profit of sea cage farming with different quota restrictions Mathieu Besson , Hans Komen , Gus Rose , Edwige Quillet , Johan A. M. van Arendonk Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia Communication dans un congrès hal-03155415v1
	Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar Mathieu Besson , Béatrice Chatain , Alain Vergnet , Frédéric Clota , Sebastien Ferrari Journée du SFAMN, Mar 2017, Montpellier, France Communication dans un congrès hal-03155384v1
	Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota Journées Techniques du Sysaaf, Dec 2017, Rennes, France Communication dans un congrès hal-03156749v1
	Impact économique de l’amélioration génétique Mathieu Besson , Marc Vandeputte , Joël Aubin , Imke J.M. de Boer , Edwige Quillet Journée du SFAM (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2016, La Grande Motte, France Communication dans un congrès hal-02796737v1
	Economic and environmental effects fo genetic improvement of growth rate and feed conversion ratio in sea cage farming with production and feed quota Mathieu Besson , Hans Komen , Joël Aubin , Johan van Arendonk , Imke J.M. de Boer Aquaculture Europe 2015, Oct 2015, Rotterdam, Netherlands Communication dans un congrès hal-01461082v1
	Economic and environmental impacts of genetic improvement in fish depend on limiting factors Mathieu Besson , Marc Vandeputte , Joël Aubin , J.A.M. van Arendonk , Imke J.M. de Boer ISGA XII, Jun 2015, Santiago de Compostela, Spain Communication dans un congrès hal-01461084v1
	Economic and environmental effects of selection on growth rate and feed conversion ratio in sea cage farming with or without production and feed quota Mathieu Besson , Marc Vandeputte , Joël Aubin , J.A.M. van Arendonk , Imke J.M. de Boer Aquaculture 2015: Cutting edge science in Aquaculture, Aug 2015, Montpellier, France Communication dans un congrès hal-01461083v1
	Valeurs économiques de l’efficacité alimentaire et du taux de croissance en système recirculé : exemple du Clarias Mathieu Besson , Marc Vandeputte , H. Komen , Joël Aubin , M. Poelman Journée du Syndicat Français de l'Aquaculture Marine (SFAM), Mar 2014, Montpellier, France Communication dans un congrès hal-01461087v1
	Quels sont les impacts économiques et environnementaux de la sélection génétique pour la croissance et l'efficacité alimentaire en pisciculture ? Mathieu Besson , H. Komen , Joël Aubin , Imke J.M. de Boer , Edwige Quillet 4. Journées Recherche Filière Piscicole (JRFP), Jul 2014, Paris, France Communication dans un congrès hal-01461086v1

	Interest of artificial intelligence to predict fillet yield in rainbow trout Jonathan D’ambrosio , Tarek Chalioui , Jean Ruche , Alexandre Desgranges , Marc Vandeputte XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile Poster de conférence hal-04185903v1
	Efficiency of genomic selection by imputation in sea bass and sea bream to improve processing traits and resistance to Viral Nervous Necrosis Jonathan D’ambrosio , Anastasia Bestin , Mathieu Besson , Romain Morvezen , Aline Bajek XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile Poster de conférence hal-04185895v1
	Individual feed intake and body weight gain relationship according to genetic origin and rearing temperature in European sea bass Dicentrarchus labrax Charles Rodde , Marc Vandeputte , François Allal , Mathieu Besson , Alain Vergnet Aquaculture Europe 2019, Oct 2019, Berlin, Germany. Poster de conférence hal-03187449v1
	Aquakultor: le premier jeu de simulation en aquaculture François Allal , Mathieu Besson , - Tomagamestudio 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019 Poster de conférence hal-02735109v1
	A medium-throughput method to phenotype fish for individual feed efficiency Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. Poster de conférence hal-03155407v1
	Selective breeding to reduce the ecological footprint of aquaculture Marc Vandeputte , Mathieu Besson , François Allal , Florence Phocas , Edwige Quillet Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. Poster de conférence hal-03156701v1
	Economic and environmental impacts of improving growth rate and feed efficiency in fish farming depend on nitrogen and density limitation Mathieu Besson , H. Komen , Marc Vandeputte , Joël Aubin , Imke J.M. de Boer 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. 2014, Proceedings, 10th World Congress of Genetics Applied to Livestock Production Poster de conférence hal-01461085v1
	Environmental impacts of genetic improvement in growth rate and feed conversion in fish farming under density and nitrogen limitation Mathieu Besson , Joël Aubin , J.A.M. van Arendonk , H. Komen , M. Poelman 9. International Conference on Life Cycle Assessment in the Agri-Food Sector (LCA Food 2014), Sep 2014, San Francisco, United States. 2014, Proceedings of the 9th International Conference on Life Cycle Assessment in the Agri-Food Sector Poster de conférence hal-01194152v1

	Synthèse des travaux du groupe de travail "Génétique et diversité des systèmes d'élevage" Mathieu Besson , Alain Ducos , Jean-Luc Gourdine , Sandrine Mignon-Grasteau , Dominique Hazard [Interne] INRAE. 2021, pp.31 Rapport hal-03671512v1

Mathieu Besson

Publications

Changes in transcriptomic and behavioural traits in activity and ventilation rates associated with divergent individual feed efficiency in gilthead sea bream (Sparus aurata)

Whole‐genome sequencing identifies interferon-induced protein IFI6/IFI27-like as a strong candidate gene for VNN resistance in European sea bass

Potential for genomic selection on feed efficiency in gilthead sea bream (Sparus aurata), based on individual feed conversion ratio, carcass and lipid traits

An investigation of links between metabolic rate and feed efficiency in European sea bass Dicentrarchus labrax

The genetic correlation between feed conversion ratio and growth rate affects the design of a breeding program for more sustainable fish production

Population, Temperature and Feeding Rate Effects on Individual Feed Efficiency in European Sea Bass (Dicentrarchus labrax)

Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass

Derivation of economic values for production traits in aquaculture species

Economic values of growth rate, feed intake, feed conversion ratio, mortality and uniformity for Nile tilapia

Effect of production quotas on economic and environmental values of growth rate and feed efficiency in sea cage fish farming

Environmental impacts of genetic improvement of growth rate and feed conversion ratio in fish farming under rearing density and nitrogen output limitations

Influence of water temperature on the economic value of growth rate in fish farming: The case of sea bass (Dicentrarchus labrax) cage farming in the Mediterranean

Economic values of growth and feed efficiency for fish farming in recirculating aquaculture system with density and nitrogen output limitations: a case study with African catfish ([i]Clarias gariepinus[/i])

AN R-BASED PIPELINE FOR GENOTYPE CALLING AND PARENTAGE ASSIGNMENT OF TRIPLOID OFFSPRING TO THEIR DIPLOID PARENTS

Genotype by environment interaction explain sex determination in the European Seabass

Can we combine genetics and a two-step temperature control to move towards monosex European seabass Dicentrarchus labrax?

Can genomics improve the selection efficiency of sea bream (Sparus aurata) candidates reared in sanitary protected RAS when GxE exist with the production environment in open-sea cages?

Réduction du coût de la sélection génomique par utilisation de panels à plus faible densité de marqueurs chez le bar et la daurade

WHOLE GENOME SEQUENCING TO REFINE THE DETECTION OF QTL FOR VIRAL NERVOUS NECROSIS IN EUROPEAN SEA BASS (DICENTRARCHUS LABRAX)

Cartographie fine de la résistance à la nécrose nerveuse virale chez le bar identifiée par séquençage du génome entier

Improving feed efficiency in fish: let’s get down to business

IFI6, an interferon alpha induced protein, identified by whole genome sequencing as involved in Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax)

Combined genomic approaches to unravel sex determination in the European seabass

Fine mapping for Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax) identified by whole genome sequencing

Phenotypic and genomic correlations between feed efficiency and metabolic traits in European sea bass

Genomic prediction and genotype-by-temperature interaction of sex tendency in European sea bass.

Genetic correlations between processing traits and individual feed efficiency in a gilthead sea bream (Sparus aurata) commercial line

Améliorer l'efficacité alimentaire des poissons en utilisant une nouvelle méthode de phénotypage en aquarium individuel

Accounting for genetic variability in fitness-related traits using a Dynamic Energy Budget model, an example on European Seabass

Sélection du bar pour l’efficacité alimentaire: on y arrive

Estimation of genetic parameters of feed conversion ratio based on individual phenotypes in sea bass

Selective breeding on tolerance to fasting improves feed conversion ratio of sea bass

Genetic improvement of feed conversion ratio in sea bass : new approach based on individual phenotypes and genomic info

Efficacité d’une sélection pour la résistance au jeûne

Using the right breeding objective can decrease environmental impacts and increase farm profit of sea cage farming with different quota restrictions

Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar

Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar

Impact économique de l’amélioration génétique

Economic and environmental effects fo genetic improvement of growth rate and feed conversion ratio in sea cage farming with production and feed quota

Economic and environmental impacts of genetic improvement in fish depend on limiting factors

Economic and environmental effects of selection on growth rate and feed conversion ratio in sea cage farming with or without production and feed quota

Valeurs économiques de l’efficacité alimentaire et du taux de croissance en système recirculé : exemple du Clarias

Quels sont les impacts économiques et environnementaux de la sélection génétique pour la croissance et l'efficacité alimentaire en pisciculture ?

Interest of artificial intelligence to predict fillet yield in rainbow trout

Efficiency of genomic selection by imputation in sea bass and sea bream to improve processing traits and resistance to Viral Nervous Necrosis

Individual feed intake and body weight gain relationship according to genetic origin and rearing temperature in European sea bass Dicentrarchus labrax

Aquakultor: le premier jeu de simulation en aquaculture

A medium-throughput method to phenotype fish for individual feed efficiency

Selective breeding to reduce the ecological footprint of aquaculture

Economic and environmental impacts of improving growth rate and feed efficiency in fish farming depend on nitrogen and density limitation

Environmental impacts of genetic improvement in growth rate and feed conversion in fish farming under density and nitrogen limitation

Synthèse des travaux du groupe de travail "Génétique et diversité des systèmes d'élevage"