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Celebrating the 20th anniversary of the first Xanthomonas genome sequences – how genomics revolutionized taxonomy, provided insight into the emergence of pathogenic bacteria, enabled new fundamental discoveries and helped developing novel control measures – a perspective from the French network on Xanthomonads
Ralf Koebnik
,
Sophie Cesbron
,
Nicolas W. G. Chen
,
Marion Fischer-Le Saux
,
Mathilde Hutin
Article dans une revue
ird-04483657v1
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Complete genome sequencing of three clade-1 xanthomonads reveals genetic determinants for a lateral flagellin and the biosynthesis of coronatine-like molecules in Xanthomonas
Chloé Peduzzi
,
Angeliki Sagia
,
Daiva Burokiene
,
Ildikó Nagy
,
Marion Fischer-Le Saux
Article dans une revue
hal-03978256v1
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Whole Genome Resources of 17 Curtobacterium flaccumfaciens Strains Including Pathotypes of C. flaccumfaciens pv. betae , C. flaccumfaciens pv. oortii , and C. flaccumfaciens pv. poinsettiae
Ebrahim Osdaghi
,
Geraldine G. Taghouti
,
Cécile Dutrieux
,
S. Mohsen Taghavi
,
Amal Fazliarab
Article dans une revue
hal-03658569v1
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Phenotypic and Molecular-Phylogenetic Analyses Reveal Distinct Features of Crown Gall-Associated Xanthomonas Strains
Hamzeh Mafakheri
,
S. Mohsen Taghavi
,
Sadegh Zarei
,
Touraj Rahimi
,
Mohammad Sadegh Hasannezhad
Article dans une revue
hal-03576592v1
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Taxonomic Refinement of Xanthomonas arboricola
Sadegh Zarei
,
S. Mohsen Taghavi
,
Touraj Rahimi
,
Hamzeh Mafakheri
,
Neha Potnis
Article dans une revue
hal-03623139v1
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Analysis of the Diversity of Xylophilus ampelinus Strains Held in CIRM-CFBP Reveals a Strongly Homogenous Species
Perrine Portier
,
Géraldine Taghouti
,
Paul-Emile Bertrand
,
Martial Briand
,
Cécile Dutrieux
Article dans une revue
hal-03794351v1
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Assessing the Cultivability of Bacteria and Fungi from Arable Crop Residues Using Metabarcoding Data as a Reference
Valerie Laval
,
Lydie Kerdraon
,
Matthieu Barret
,
Anne-Lise Liabot
,
Coralie Marais
Article dans une revue
hal-03368843v1
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Genetic diversity and population structure analyses in the Alpine plum (Prunus brigantina Vill.) confirm its affiliation to the Armeniaca section
Shuo Liu
,
Stephane Decroocq
,
Elodie Harte
,
David Tricon
,
Aurelie Chague
Article dans une revue
hal-03125874v1
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A rapid and simple method for assessing and representing genome sequence relatedness
Martial Briand
,
M Bouzid
,
G Hunault
,
M Legeay
,
Marion Fischer-Le Saux
Article dans une revue
hal-03560813v1
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Xanthomonas arboricola pv. juglandis and pv. corylina : Brothers or distant relatives? Genetic clues, epidemiology, and insights for disease management
Monika Kałużna
,
Marion Fischer‐le Saux
,
Joël Pothier
,
Marie-Agnès Jacques
,
Aleksa Obradović
Article dans une revue
hal-03314545v1
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The complete genome sequence of Xanthomonas theicola, the causal agent of canker on tea plants, reveals novel secretion systems in clade-1 xanthomonads
Ralf Koebnik
,
Daiva Burokiene
,
Claude Bragard
,
Christine Chang
,
Marion Fischer-Le Saux
Article dans une revue
hal-02976163v1
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High-Quality Genome Resource of Xanthomonas hyacinthi Generated via Long-Read Sequencing
Stephen P. Cohen
,
Emily K. Luna
,
Jillian M. Lang
,
Janet Ziegle
,
Christine Chang
Article dans une revue
hal-02624813v1
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Clarifying the taxonomy of the causal agent of bacterial leaf spot of lettuce through a polyphasic approach reveals that Xanthomonas cynarae Trébaol et al. 2000 emend. Timilsina et al. 2019 is a later heterotypic synonym of Xanthomonas hortorum Vauterin et al. 1995
Lucas Morinière
,
Alexandre Burlet
,
Emma Rosenthal
,
Xavier Nesme
,
Perrine Portier
Article dans une revue
hal-02901694v1
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Reclassification of Xanthomonas gardneri (ex Šutič 1957) Jones et al. 2006 as a later heterotypic synonym of Xanthomonas cynarae Trébaol et al. 2000 and description of X. cynarae pv. cynarae and X. cynarae pv. gardneri based on whole genome analyses
S. Timilsina
,
S. Kara
,
Marie Agnes Jacques
,
N. Potnis
,
G. V. Minsavage
Article dans une revue
hal-02626928v1
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Genetic diversity of Curtobacterium flaccumfaciens revealed by multilocus sequence analysis
R. M. Gonçalves
,
M. I. Balbi-Peña
,
J. M. Soman
,
A. C. Maringoni
,
Geraldine Taghouti
Article dans une revue
hal-02627151v1
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Isolation of atypical wheat-associated xanthomonads in Algeria
Bahria Khenfous-Djebari
,
Marion Fischer-Le Saux
,
Mohamed Kerkoud
,
Traki Benhassine
,
Zouazi Bouznad
Article dans une revue
hal-02971104v1
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A rapid and simple method for assessing and representing genome sequences relatedness
Martial Briand
,
Mariam Bouzid
,
Gilles Hunault
,
Marc Legeay
,
Marion Le Saux
Article dans une revue
hal-02171444v1
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Elevation of Pectobacterium carotovorum subsp. odoriferum to species level as Pectobacterium odoriferum sp. nov., proposal of Pectobacterium brasiliense sp. nov. and Pectobacterium actinidiae sp. nov., emended description of Pectobacterium carotovorum and description of Pectobacterium versatile sp. nov., isolated from streams and symptoms on diverse plants
Perrine Portier
,
Jacques Pédron
,
Géraldine Taghouti
,
Marion Fischer-Le Saux
,
Emma Caullireau
International Journal of Systematic and Evolutionary Microbiology, 2019, 69 (10), pp.3207--3216. ⟨10.1099/ijsem.0.003611⟩
Article dans une revue
hal-02335217v1
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Role of the acquisition of a type 3 secretion system in the emergence of novel pathogenic strains of Xanthomonas
Valérian Méline
,
Wesley Delage
,
Chrystelle Brin
,
Camille Li-Marchetti
,
Daniel Sochard
Article dans une revue
hal-02510889v1
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Xanthomonas prunicola sp. nov., a novel pathogen that affects nectarine (Prunus persica var. nectarina) trees
María López
,
Pablo Lopez-Soriano
,
Jerson Garita-Cambronero
,
Carmen Beltrán
,
Geraldine Taghouti
International Journal of Systematic and Evolutionary Microbiology, 2018, 68 (6), pp.68:1857-1866. ⟨10.1099/ijsem.0.002743⟩
Article dans une revue
hal-01904508v1
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High-Quality Draft Genome Sequence of Curtobacterium sp. Strain Ferrero
Ebrahim Osdaghi
,
Natalia Forero Serna
,
Stéphanie Bolot
,
Marion Fischer-Le Saux
,
Marie-Agnès Jacques
Article dans une revue
hal-01905579v1
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Ancestral acquisitions, gene flow and multiple evolutionary trajectories of the type three secretion system and effectors in Xanthomonas plant pathogens
Déborah Merda
,
Martial Briand
,
Eran Bosis
,
Céline Rousseau
,
Perrine Portier
Article dans une revue
hal-01904571v1
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Using Ecology, Physiology, and Genomics to Understand Host Specificity in Xanthomonas
Marie-Agnès Jacques
,
Matthieu Arlat
,
Alice Boulanger
,
Tristan Boureau
,
Sébastien Carrère
Article dans une revue
hal-03383508v1
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Recombination-prone bacterial strains form a reservoir from which epidemic clones emerge in agroecosystems
Déborah Merda
,
Sophie Bonneau
,
Jean-François Guimbaud
,
Karine Durand
,
Chrystelle Brin
Article dans une revue
hal-01353536v1
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Morphological and genotypic features of Xanthomonas arboricola pv. juglandis populations from walnut groves in Romagna region, Italy
Davide Giovanardi
,
Sophie Bonneau
,
Sophie Gironde
,
Marion Le Saux
,
Charles Manceau
Article dans une revue
hal-01456002v1
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Comparative Genomics of Pathogenic and Nonpathogenic Strains of Xanthomonas arboricola Unveil Molecular and Evolutionary Events Linked to Pathoadaptation
Sophie Cesbron
,
Martial Briand
,
Salwa Es-Sakhi
,
Sophie Gironde
,
Tristan Boureau
Article dans une revue
hal-01455982v1
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High-Quality Draft Genome Sequence of the Xanthomonas translucens pv. cerealis Pathotype Strain CFBP 2541.
Céline Pesce
,
Stéphanie Bolot
,
Sébastien Cunnac
,
Perrine Portier
,
Marion Le Saux
Article dans une revue
hal-01209993v1
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Characterization of Pseudomonas syringae pv. actinidiae (Psa) isolated from France and assignment of Psa biovar 4 to a de novo pathovar: Pseudomonas syringae pv. actinidifoliorum pv. nov.
A. Cunty
,
F. Poliakoff
,
C. Rivoal
,
S. Cesbron
,
Marion Fischer-Le Saux
Article dans une revue
hal-01134870v1
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Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome.
Brice Roux
,
Stéphanie Bolot
,
Endrick Guy
,
Nicolas Denancé
,
Martine Lautier
Article dans une revue
hal-01455988v1
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Erwinia iniecta sp. nov., isolated from Russian wheat aphid (Diuraphis noxia)
Tony Campillo
,
Emily Luna
,
Perrine Portier
,
Marion Fischer-Le Saux
,
Nora Lapitan
International Journal of Systematic and Evolutionary Microbiology, 2015, 65 (10), pp.3625-3633. ⟨10.1099/ijsem.0.000466⟩
Article dans une revue
hal-01905585v1
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Aggressive Emerging Pathovars of Xanthomonas arboricola Represent Widespread Epidemic Clones Distinct from Poorly Pathogenic Strains, as Revealed by Multilocus Sequence Typing
Marion Fischer-Le Saux
,
Sophie Bonneau
,
Salwa Essakhi
,
Charles Manceau
,
Marie-Agnès Jacques
Article dans une revue
hal-01905527v1
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Phylogenetic and Variable-Number Tandem-Repeat Analyses Identify Nonpathogenic Xanthomonas arboricola Lineages Lacking the Canonical Type III Secretion System
Salwa Essakhi
,
Sophie Cesbron
,
Marion Fischer-Le Saux
,
Sophie Bonneau
,
Marie-Agnès Jacques
Article dans une revue
hal-01905498v1
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Draft Genome Sequence ofXanthomonas translucenspv. graminis Pathotype Strain CFBP 2053
Céline Pesce
,
Stéphanie Bolot
,
Edwige Berthelot
,
Claude Bragard
,
Sebastien Cunnac
Article dans une revue
hal-01594261v1
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Genome Sequences of the Race 1 and Race 4 Xanthomonas campestris pv. campestris Strains CFBP 1869 and CFBP 5817.
Stéphanie Bolot
,
Aude Cerutti
,
Sebastien Carrere
,
Matthieu Arlat
,
Marion Le Saux
Article dans une revue
hal-01455989v1
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List of New Names of Plant Pathogenic Bacteria (2011-2012)
C. T. Bull
,
T. A. Coutinho
,
T. P. Denny
,
G. Firrao
,
Marion Le Saux
Article dans une revue
hal-01210013v1
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In memoriam - John M. Young (1942-2013)
C. T. Bull
,
T.A. Countinho
,
T. P. Denny
,
G. Firrao
,
Marion Le Saux
International Journal of Systematic and Evolutionary Microbiology, 2014, 64 (Pt 7), pp.2183-2183. ⟨10.1099/ijs.0.066415-0⟩
Article dans une revue
hal-01358463v1
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Draft Genome Sequence of the Xanthomonas cassavae Type Strain CFBP 4642.
Stéphanie S. Bolot
,
Alejandra Munoz Bodnar
,
Sébastien Cunnac
,
Erika Ortiz
,
Boris Szurek
Article dans une revue
hal-02642222v1
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High-Quality Draft Genome Sequences of Xanthomonas axonopodis pv. glycines Strains CFBP 2526 and CFBP 7119.
Armelle Darrasse
,
Stéphanie S. Bolot
,
Laurana Serres Giardi
,
Erika Charbit
,
Tristan Boureau
Article dans une revue
hal-02648487v1
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Evolutionary History of the Plant Pathogenic Bacterium Xanthomonas axonopodis
Nadia Mhedbi-Hajri
,
Ahmed Hajri
,
Tristan Boureau
,
Armelle Darrasse
,
Karine Durand
Article dans une revue
hal-01199308v1
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Type Three Effector Gene Distribution and Sequence Analysis Provide New Insights into the Pathogenicity of Plant-Pathogenic Xanthomonas arboricola
Ahmed Hajri
,
Joël F. Pothier
,
Marion Fischer-Le Saux
,
Sophie Bonneau
,
Stéphane Poussier
Article dans une revue
hal-01199341v1
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MultiLocus Sequence Analysis- and Amplified Fragment Length Polymorphism-based characterization of xanthomonads associated with bacterial spot of tomato and pepper and their relatedness to Xanthomonas species
A. A. Hamza
,
Isabelle Robene-Soustrade
,
Emmanuel Jouen
,
Pierre Lefeuvre
,
Frédéric Chiroleu
Article dans une revue
hal-01455963v1
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LIST OF NEW NAMES OF PLANT PATHOGENIC BACTERIA (2008-2010)
C. T. Bull
,
S. H. de Boer
,
T. P. Denny
,
G. Firrao
,
Marion Le Saux
Journal of Plant Pathology, 2012, 94 (1), pp.21 - 27
Article dans une revue
hal-01209934v1
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Pseudomonas protegens sp. nov., widespread plant-protecting bacteria producing the biocontrol compounds 2,4-diacetylphloroglucinol and pyoluteorin
Alban Ramette
,
Michele Frapolli
,
Marion Fischer-Le Saux
,
C. Gruffaz
,
Jean-Marie Meyer
Article dans une revue
halsde-00723491v1
|
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A multilocus sequence analysis of Xanthomonas campestris reveals a complex structure within crucifer-attacking pathovars of this species
Emilie Fargier
,
Marion Le Saux
,
Charles Manceau
Article dans une revue
hal-02651372v1
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Pseudomonas cannabina pv. cannabina pv. nov., and Pseudomonas cannabina pv. alisalensis (Cintas Koike and Bull, 2000) comb. nov., are members of the emended species Pseudomonas cannabina (ex Sutic & Dowson 1959) Gardan, Shafik, Belouin, Brosch, Grimont & Grimont 1999.
Carolee T. Bull
,
Charles Manceau
,
John Lydon
,
Hyesuk Kong
,
Boris A. Vinatzer
Article dans une revue
hal-02668539v1
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COMPREHENSIVE LIST OF NAMES OF PLANT PATHOGENIC BACTERIA, 1980-2007
C. T. Bull
,
S. H. de Boer
,
T. P. Denny
,
G. Firrao
,
M. Fischer-Le Saux
European Journal of Plant Pathology, 2010, 92 (3), pp.551 - 592
Article dans une revue
hal-02669057v1
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Demystifying the nomenclature of bacterial plant pathogens
C.T. Bull
,
S.H. de Boer
,
T.P. Denny
,
G. Firrao
,
Marion Le Saux
Article dans une revue
hal-02666685v1
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Apports du séquençage multiloci à la phylogénie et à la taxonomie de deux genres majeurs de bactéries phytopathogènes : Pseudomonas et Xanthomonas
Marion Fischer-Le Saux
,
Olivier Pruvost
,
Emilie Fargier
,
Nathalie Ah-You
,
Sophie Bonneau
Actes du BRG, 2008, 7, pp.171-185
Article dans une revue
hal-04235778v1
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Emended description of the genus Phyllobacterium and description of four novel species associated with plant roots: Phyllobacterium bourgognense sp nov., Phyllobacterium ifriqiyense sp nov., Phyllobacterium leguminum sp nov and Phyllobacterium brassicacearum sp nov
Sophie Mantelin
,
Marion Fisher-Le Saux
,
Frédéric Zakhia
,
Gilles Bena
,
Sophie Bonneau
Article dans une revue
hal-02665673v1
|
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Identification of Genomic Species in Agrobacterium Biovar 1 by AFLP Genomic Markers
Perrine Portier
,
Marion Fischer-Le Saux
,
Christophe Mougel
,
Catherine Lerondelle
,
David Chapulliot
Article dans une revue
hal-00128068v1
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Transfer of Pectobecterium chrysanthemi (Burkholder et al. 1953) Brenner et al. 1973 and Brenneria paradisiaca to the genus Dickeya gen. nov. as Dickeya chrysanthemi comb. nov. and Dickeya paradisiaca comb. nov. and delineation of four novel species, Dickeya dadantii sp. nov., Dickeya dianthicola sp. nov., Dickeya dieffenbachiae sp. nov. and Dickeya zeae sp. nov.
R. Samson
,
J.B. Legendre
,
R. Christen
,
M. Fisher-Le Saux
,
Wafa Achouak
Article dans une revue
hal-02681320v1
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Computer-assisted identification and clustering for regulated phytopathogenic bacteria : construction of a reference database and development of a computer system
F. Poliakoff
,
M. Fisher-Le Saux
,
Gilles Hunault
,
C. François
,
C. Rivoal
Article dans une revue
hal-02682182v1
|
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Deinococcus deserti sp. nov., a gamma-radiation-tolerant bacterium isolated from the Sahara Desert
Arjan de Groot
,
Virginie Chapon
,
Pascale Servant
,
Richard Christen
,
Marion Fischer-Le Saux
International Journal of Systematic and Evolutionary Microbiology, 2005, 55 (6), pp.2441-2446. ⟨10.1099/ijs.0.63717-0⟩
Article dans une revue
hal-01560916v1
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Erwinia toletana sp. nov., associated with Pseudomonas savastanoi-induced tree knots
A.M. Rojas
,
J.E. Garcia de Los Rios
,
M. Fisher-Le Saux
,
P. Jiménez
,
P. Reche
Article dans une revue
hal-02670591v1
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First report of bacterial canker of walnut caused by Brenneria nigrifluens in France
Michel Ménard
,
Francis Delort
,
A. Baudry
,
Marion Le Saux
Article dans une revue
hal-02672493v1
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Detection of Cytotoxin-Hemolysin mRNA in Nonculturable Populations of Environmental and Clinical Vibrio vulnificus Strains in Artificial Seawater
Marion Fischer-Le Saux
,
Dominique Hervio-Heath
,
Solen Loaec
,
Rita Colwell
,
Monique Pommepuy
Article dans une revue
hal-04236194v1
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Occurrence of natural dixenic associations between the symbiont Photorhabdus luminescens and bacteria related to Ochrobactrum spp. in tropical entomopathogenic Heterorhabditis spp. (Nematoda, Rhabditida)
Isabelle Babic
,
M. Fischer-Le Saux
,
E. Giraud
,
Noël Boemare
Article dans une revue
hal-02696296v1
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Gnotobiological study of infective juveniles and symbionts of Steinernema scapterisci : a model to clarify the concept of the natural occurence of monoxenic associations in entomopathogenic nematodes
E. Bonifassi
,
M. Fisher-Le Saux
,
Noël Boemare
,
Anne Lanois
,
C. Laumond
Article dans une revue
hal-02696808v1
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The bacterial symbiont Xenrhabdus poinarii (Enterobacteriaceae) is harbored by two phylogenetic related host nematodes: the entomopathogenic species Steinernema cubanum and Steinernema glaseri (Nematoda: Steinernematidae)
M. Fischer-Le Saux
,
E. Arteaga-Hernandez
,
Z. Mracek
,
N.E. Boemare
Article dans une revue
hal-02694060v1
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Polyphasic classification of the genus photorhabdus and proposal of new taxa: P.luminescens subsp.luminescens subsp.nov., P.luminescens subsp.akhurstii subsp.nov., P.luminescens subsp.laumondii subsp.nov., P.temperata sp. nov., P. temperata subsp. temperata subsp. nov. and P. asymbiotica sp. nov.
M. Fischer-Le Saux
,
V. Viallard
,
B. Brunel
,
Philippe Normand
,
N.E. Boemare
Article dans une revue
hal-02698057v1
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PCR-Ribotyping of Xenorhabdus and Photorhabdus isolates from the Caribbean region in relation to the taxonomy and geographic distribution of their nematode hosts
Marion Fischer-Le Saux
,
Hervé Mauléon
,
Philippe Constant
,
Brigitte Brunel
,
Noël Boemare
Article dans une revue
hal-02693990v1
|
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Natural occurence of entomopathogenic nematodes (Rhabditida:Steinernematidae and Heterrorhabditidae) in Guadeloupe islands
Pierre Constant
,
L. Marchay
,
M. Fisher-Le-Saux
,
S. Briand-Panoma
,
Hervé Mauléon
Fundamental and Applied Nematology, 1998, 21 (6), pp.667-672
Article dans une revue
hal-02688500v1
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