Marie Fablet

Documents

Publications

	A quantitative, genome-wide analysis in Drosophila reveals transposable elements’ influence on gene expression is species-specific Marie Fablet , Judit Salces-Ortiz , Angelo Jacquet , Bianca Menezes , Corentin Dechaud Genome Biology and Evolution, 2023, 15 (9), pp.evad160. ⟨10.1093/gbe/evad160⟩ Article dans une revue hal-04195964v1
	Impact of Heat Stress on Transposable Element Expression and Derived Small RNAs in Drosophila subobscura Alejandra Bodelón , Marie Fablet , Daniel Siqueira de Oliveira , Cristina Vieira , Maria Pilar García Guerreiro Genome Biology and Evolution, 2023, 15 (11), ⟨10.1093/gbe/evad189⟩ Article dans une revue hal-04276658v1
	ChimeraTE: a pipeline to detect chimeric transcripts derived from genes and transposable elements Daniel Oliveira , Marie Fablet , Anaïs Larue , Agnès Vallier , Claudia Carareto Nucleic Acids Research, inPress, 51 (18), pp.9764-9784. ⟨10.1093/nar/gkad671⟩ Article dans une revue hal-04195961v1
	High Stability of the Epigenome in Drosophila Interspecific Hybrids Alejandra Bodelón , Marie Fablet , Philippe Veber , Cristina Vieira , Maria Pilar García Guerreiro Genome Biology and Evolution, 2022, 14 (2), ⟨10.1093/gbe/evac024⟩ Article dans une revue hal-03594035v1
	Phenotypic and Transcriptomic Responses to Stress Differ According to Population Geography in an Invasive Species Pierre Marin , Angelo Jaquet , Justine Picarle , Marie Fablet , Vincent Merel Genome Biology and Evolution, 2021, 13 (9), pp.evab208. ⟨10.1093/gbe/evab208⟩ Article dans une revue hal-03417240v1
	The Worldwide Invasion of Drosophila suzukii Is Accompanied by a Large Increase of Transposable Element Load and a Small Number of Putatively Adaptive Insertions Vincent Mérel , Patricia Gibert , Inessa Buch , Valentina Rodriguez Rada , Arnaud Estoup Molecular Biology and Evolution, 2021, 38 (10), pp.4252-4267. ⟨10.1093/molbev/msab155⟩ Article dans une revue hal-03417234v1
	Infections by Transovarially Transmitted DMelSV in Drosophila Have No Impact on Ovarian Transposable Element Transcripts but Increase Their Amounts in the Soma Marlène Roy , Barbara Viginier , Camille A Mayeux , Maxime Ratinier , Marie Fablet Genome Biology and Evolution, 2021, 13 (9), ⟨10.1093/gbe/evab207⟩ Article dans une revue hal-03423252v1
	A transposon story : from TE content to TE dynamic invasion of Drosophila genomes using the single-molecule sequencing technology from Oxford Nanopore Mohamed Mourdas , Nguyet Thi-Minh Dang , Yuki Ogyama , Nelly Burlet , Bruno Mugat Cells, 2020, 9 (8), pp.1776. ⟨10.3390/cells9081776⟩ Article dans une revue hal-02905128v1
	Transposable elements in Drosophila Vincent Mérel , Matthieu Boulesteix , Marie Fablet , Cristina Vieira Mobile DNA, 2020, 11 (1), ⟨10.1186/s13100-020-00213-z⟩ Article dans une revue hal-02957906v1
	Viral infection impacts transposable element transcript amounts in Drosophila Marlène Roy , Barbara Viginier , Edouard Saint-Michel , Frederick Arnaud , Maxime Ratinier Proceedings of the National Academy of Sciences of the United States of America, 2020, 117 (22), pp.12249-12257. ⟨10.1073/pnas.2006106117⟩ Article dans une revue hal-02918747v1
	Dynamic Interactions Between the Genome and an Endogenous Retrovirus: Tirant in Drosophila simulans Wild-Type Strains Marie Fablet , Angelo Jacquet , Rita Rebollo , Annabelle A. Haudry , Carine Rey G3, 2019, 9 (3), pp.855-865. ⟨10.1534/g3.118.200789⟩ Article dans une revue hal-02004384v1
	An attempt to select non-genetic variation in resistance to starvation and reduced chill coma recovery time in Drosophila melanogaster Bianca Menezes , Judit Salces-Ortiz , Héloise Muller , Nelly Burlet , Sonia Martinez Journal of Experimental Biology, 2018, 221 (23), pp.jeb186254. ⟨10.1242/jeb.186254⟩ Article dans une revue hal-01965032v1
	The somatic piRNA pathway controls germline transposition over generations Bridlin Barckmann , Marianne El-Barouk , Alain Pélisson , Bruno Mugat , Blaise Maxime Li Nucleic Acids Research, 2018, 46 (18), pp.9524 - 9536. ⟨10.1093/nar/gky761⟩ Article dans une revue hal-01904679v1
	TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes Emmanuelle Lerat , Marie Fablet , Laurent Modolo , Hélène Lopez-Maestre , Cristina Vieira Nucleic Acids Research, 2017, 45, pp.13. ⟨10.1093/nar/gkw953⟩ Article dans une revue hal-01524877v1
	Variable expression levels detected in the Drosophila effectors of piRNA biogenesis Marie Fablet , Abdou Akkouche , Virginie Braman , Cristina Vieira Gene, 2014, 537 (1), pp.149-153. ⟨10.1016/j.gene.2013.11.095⟩ Article dans une revue hal-00922704v1
	Host Control of Insect Endogenous Retroviruses: Small RNA Silencing and Immune Response Marie Fablet Viruses, 2014, 6, pp.4447-4464. ⟨10.3390/v6114447⟩ Article dans une revue hal-02071534v1
	Maternally deposited germline piRNAs silence the tirant retrotransposon in somatic cells Abdou Akkouche , Thomas Grentzinger , Marie Fablet , Claudia Armenise , Nelly Burlet EMBO Reports, 2013, 14 (5), pp.458-64. ⟨10.1038/embor.2013.38⟩ Article dans une revue hal-00850319v1
	tirant, a newly discovered active endogenous retrovirus in Drosophila simulans. Abdou Akkouche , Rita Rebollo , Nelly Burlet , Caroline Esnault , Sonia Martinez Journal of Virology, 2012, 86 (7), pp.3675-3681. ⟨10.1128/JVI.07146-11⟩ Article dans une revue hal-00763499v1
	A comparative analysis of the amounts and dynamics of transposable elements in natural populations of Drosophila melanogaster and Drosophila simulans. Cristina Vieira , Marie Fablet , Emmanuelle Lerat , Matthieu Boulesteix , Rita Rebollo Journal of Environmental Radioactivity, 2012, 113, pp.83-86. ⟨10.1016/j.jenvrad.2012.04.001⟩ Article dans une revue hal-00763500v1
	Evolvability, epigenetics and transposable elements Marie Fablet , C. Vieira Biomolecular concepts, 2011, 2, pp.333-341 Article dans une revue hal-02299281v1
	Evolutionary Origin and Functions of Retrogene Introns M. Fablet , M. Bueno , L. Potrzebowski , H. Kaessmann Molecular Biology and Evolution, 2009, 26(9), pp.2147-2156 Article dans une revue hal-00428401v1
	Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila M. Fablet , E. Lerat , R. Rebollo , B. Horard , N. Burlet FASEB Journal, 2009, 23, pp.54-62 Article dans une revue hal-00428323v1
	Infra- and Transspecific Clues to Understanding the Dynamics of Transposable Elements Cristina Vieira , M. Fablet , E. Lerat genome dyn stab, 2009, --, pp.115-123 Article dans une revue hal-00428338v1
	Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila. Marie Fablet , Emmanuelle Lerat , Rita Rebollo , Béatrice Horard , Nelly Burlet FASEB Journal, 2009, 23 (5), pp.1482-9. ⟨10.1096/fj.08-123513⟩ Article dans une revue hal-00850396v1
	Evolutionary Pathways of the tirant LTR Retrotransposon in the Drosophila melanogaster Subgroup of Species M. Fablet , S. Souames , C. Biémont , Cristina Vieira Journal of Molecular Evolution, 2007, 64, pp.438-447 Article dans une revue hal-00434598v1
	The evolution of retrotransposon regulatory regions and its consequences on the Drosophila melanogaster and Homo sapiens host genomes Marie Fablet , Rita Rebollo , Christian Biémont , Cristina Vieira Gene, 2007, 390 (1-2), pp.84-91. ⟨10.1016/j.gene.2006.08.005⟩ Article dans une revue hal-02665818v1
	Ongoing loss of the tirant transposable element in natural populations of Drosophila simulans M. Fablet , J.F. Donald , C. Biémont , Cristina Vieira Gene, 2006, 375, pp.54-62 Article dans une revue hal-00427929v1

	Syndrome de Klinefelter, rôle du chromosome Y dans l’espérance de vie humaine ? J Teoli, , C Bardel, , M Fablet, , G Marais, , F Gueyffier, Congrès de la Société Française d'Endocrinologie, 2020, Marseille, France. pp.194, ⟨10.1016/j.ando.2020.07.150⟩ Communication dans un congrès hal-03060317v1
	Transposable Element Dynamics in an Invasive Species V. Mérel , Marie Fablet , M. Boulesteix , Arnaud A Estoup , Patricia Gibert Congrès National des Éléments Transposables (CNET 2018), Jul 2018, Clermont-Ferrand, France Communication dans un congrès hal-02786547v1

	Self and Nonself from a Genomic Perspective: Transposable Elements Marie Fablet , Judit Salces-Ortiz , Bianca Fraga Menezes , Marlène Roy , Cristina Vieira Evolutionary Biology: Self/Nonself Evolution, Species and Complex Traits Evolution, Methods and Concepts, 2 (5), Springer International Publishing, pp.111-128, 2017, ⟨10.1007/978-3-319-61569-1_6⟩ Chapitre d'ouvrage hal-03323222v1

Marie Fablet

Publications

A quantitative, genome-wide analysis in Drosophila reveals transposable elements’ influence on gene expression is species-specific

Impact of Heat Stress on Transposable Element Expression and Derived Small RNAs in Drosophila subobscura

ChimeraTE: a pipeline to detect chimeric transcripts derived from genes and transposable elements

High Stability of the Epigenome in Drosophila Interspecific Hybrids

Phenotypic and Transcriptomic Responses to Stress Differ According to Population Geography in an Invasive Species

The Worldwide Invasion of Drosophila suzukii Is Accompanied by a Large Increase of Transposable Element Load and a Small Number of Putatively Adaptive Insertions

Infections by Transovarially Transmitted DMelSV in Drosophila Have No Impact on Ovarian Transposable Element Transcripts but Increase Their Amounts in the Soma

A transposon story : from TE content to TE dynamic invasion of Drosophila genomes using the single-molecule sequencing technology from Oxford Nanopore

Transposable elements in Drosophila

Viral infection impacts transposable element transcript amounts in Drosophila

Dynamic Interactions Between the Genome and an Endogenous Retrovirus: Tirant in Drosophila simulans Wild-Type Strains

An attempt to select non-genetic variation in resistance to starvation and reduced chill coma recovery time in Drosophila melanogaster

The somatic piRNA pathway controls germline transposition over generations

TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes

Variable expression levels detected in the Drosophila effectors of piRNA biogenesis

Host Control of Insect Endogenous Retroviruses: Small RNA Silencing and Immune Response

Maternally deposited germline piRNAs silence the tirant retrotransposon in somatic cells

tirant, a newly discovered active endogenous retrovirus in Drosophila simulans.

A comparative analysis of the amounts and dynamics of transposable elements in natural populations of Drosophila melanogaster and Drosophila simulans.

Evolvability, epigenetics and transposable elements

Evolutionary Origin and Functions of Retrogene Introns

Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila

Infra- and Transspecific Clues to Understanding the Dynamics of Transposable Elements

Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila.

Evolutionary Pathways of the tirant LTR Retrotransposon in the Drosophila melanogaster Subgroup of Species

The evolution of retrotransposon regulatory regions and its consequences on the Drosophila melanogaster and Homo sapiens host genomes

Ongoing loss of the tirant transposable element in natural populations of Drosophila simulans

Syndrome de Klinefelter, rôle du chromosome Y dans l’espérance de vie humaine ?

Transposable Element Dynamics in an Invasive Species

Self and Nonself from a Genomic Perspective: Transposable Elements