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Image Registration of Satellite Imagery with Deep Convolutional Neural Networks

Maria Vakalopoulou , Stergios Christodoulidis , Mihir Sahasrabudhe , Stavroula Mougiakakou , Nikos Paragios
IGARSS 2019 - 2019 IEEE International Geoscience and Remote Sensing Symposium, Jul 2019, Yokohama, France. pp.4939-4942, ⟨10.1109/IGARSS.2019.8898220⟩
Communication dans un congrès hal-02422555v1
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Unsupervised Nuclei Segmentation using Spatial Organization Priors

Loïc Le Bescond , Marvin Lerousseau , Ingrid Garberis , Fabrice André , Stergios Christodoulidis , et al.
MICCAI 2022 - 25th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2022, Singapore, Singapore. pp.325-335
Communication dans un congrès hal-03644463v2
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Have Foundational Models Seen Satellite Images?

Akash Panigrahi , Sagar Verma , Matthieu Terris , Maria Vakalopoulou
IGARSS 2023 - International Geoscience and Remote Sensing Symposium, IEEE, Jul 2023, Pasadena, United States
Communication dans un congrès hal-04112634v1

Deep Learning–based Approach for Automated Assessment of Interstitial Lung Disease in Systemic Sclerosis on CT Images

Guillaume Chassagnon , Maria Vakalopoulou , Alexis Régent , Evangelia Zacharaki , Galit Aviram , et al.
Radiology: Artificial Intelligence, 2020, 2 (4), pp.e190006. ⟨10.1148/ryai.2020190006⟩
Article dans une revue hal-03133250v1
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Hyper-AdaC: Adaptive clustering-based hypergraph representation of whole slide images for survival analysis

Hakim Benkirane , Maria Vakalopoulou , Stergios Christodoulidis , Ingrid-Judith Garberis , Stefan Michiels , et al.
ML4H 2022 - Machine Learning for Health, Nov 2022, New Orelans, France. pp.405-418
Communication dans un congrès hal-04330534v1

Detailed Land Cover Mapping from Multitemporal Landsat-8 Data of Different Cloud Cover

Christina Karakizi , Konstantinos Karantzalos , Maria Vakalopoulou , Georgia Antoniou
Remote Sensing, 2018, 10 (8), pp.1214. ⟨10.3390/rs10081214⟩
Article dans une revue hal-01959065v1
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Linear and Deformable Image Registration with 3D Convolutional Neural Networks

Stergios Christodoulidis , Mihir Sahasrabudhe , Maria Vakalopoulou , Guillaume Chassagnon , Marie-Pierre Revel , et al.
Reconstruction and Analysis of Moving Body Organs, 21th International Conference on Medical Image Computing and Computer Assisted Intervention 2018, Sep 2018, Grenada, Spain
Communication dans un congrès hal-01935607v1
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Simultaneous registration, segmentation and change detection from multisensor, multitemporal satellite image pairs.

Maria Vakalopoulou , Christos Platias , Maria Papadomanolaki , Nikos Paragios , Konstantinos Karantzalos
International Geoscience and Remote Sensing Symposium (IGARSS), Jul 2016, Beijing, China. ⟨10.1109/IGARSS.2016.7729469⟩
Communication dans un congrès hal-01413373v1

Deep Learning for the Earth Sciences

Maria Vakalopoulou , Stergios Christodoulidis , Mihir Sahasrabudhe , Nikos Paragios
Deep Learning for the Earth Sciences: A Comprehensive Approach to Remote Sensing, Climate Science, and Geosciences, 1, Wiley, 2021, ⟨10.1002/9781119646181.ch9⟩
Chapitre d'ouvrage hal-03539417v1
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Dosiomics-Based Prediction of Radiation-Induced Valvulopathy after Childhood Cancer

Stefania Chounta , Rodrigue S. Allodji , Maria Vakalopoulou , Mahmoud Bentriou , Duyen Thi Do , et al.
Cancers, 2023, 15 (12), ⟨10.3390/cancers15123107⟩
Article dans une revue hal-04191649v1
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Certification of Deep Learning Models for Medical Image Segmentation

Othmane Laousy , Alexandre Araujo , Guillaume Chassagnon , Nikos Paragios , Marie Pierre Revel , et al.
MICCAI 2023 - 26th International Conference on Medical Image Computing and Computer Assisted Intervention, Oct 2023, Vancouver (BC), Canada. pp.611-621, ⟨10.1007/978-3-031-43901-8_58⟩
Communication dans un congrès hal-04388114v1
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Deep Learning-Based Concurrent Brain Registration and Tumor Segmentation

Théo Estienne , Marvin Lerousseau , Maria Vakalopoulou , Emilie Alvarez Andres , Enzo Battistella , et al.
Frontiers in Computational Neuroscience, 2020, Multimodal Brain Tumor Segmentation and Beyond, ⟨10.3389/fncom.2020.00017⟩
Article dans une revue hal-02974826v1
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Me-NDT: Neural-backed Decision Tree for visual Explainability of deep Medical models

Guanghui Fu , Ruiqian Wang , Jianqiang Li , Maria Vakalopoulou , Vicky Kalogeiton
Medical Imaging with Deep Learning 2021, Jul 2021, Lübeck (virtual), Germany
Communication dans un congrès hal-03353559v1

SparseConvMIL: Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification

Marvin Lerousseau , Maria Vakalopoulou , Eric Deutsch , Nikos Paragios
Machine Learning Research 156, Sep 2021, Strasbourg, France
Communication dans un congrès hal-03539261v1

Artificial intelligence applications for thoracic imaging

Guillaume Chassagnon , Maria Vakalopoulou , Nikos Paragios , Marie-Pierre Revel
European Journal of Radiology, 2020, 123, pp.108774. ⟨10.1016/j.ejrad.2019.108774⟩
Article dans une revue hal-02422501v1
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Towards Better Certified Segmentation via Diffusion Models

Othmane Laousy , Alexandre Araujo , Guillaume Chassagnon , Marie-Pierre Revel , Siddharth Garg , et al.
UAI 2023 - The 39th Conference on Uncertainty in Artificial Intelligence -, Jul 2023, Pittsburgh (Pennsylvania), United States. pp.1185-1195
Communication dans un congrès hal-04388219v1
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AI-driven quantification, staging and outcome prediction of COVID-19 pneumonia

Guillaume Chassagnon , Maria Vakalopoulou , Enzo Battistella , Stergios Christodoulidis , Trieu-Nghi Hoang-Thi , et al.
Medical Image Analysis, 2021, 67, pp.101860. ⟨10.1016/j.media.2020.101860⟩
Article dans une revue hal-03133234v1

A Joint Spatial and Magnification Based Attention Framework for Large Scale Histopathology Classification

Jingwei Zhang , Ke Ma , John van Arman , Rajarsi Gupta , Joel Saltz , et al.
CVMI, Jun 2021, Nashville, United States. ⟨10.1109/CVPRW53098.2021.00418⟩
Communication dans un congrès hal-03539240v1

Gigapixel Whole-Slide Images Classification Using Locally Supervised Learning

Jingwei Zhang , Xin Zhang , Ke Ma , Rajarsi Gupta , Joel Saltz , et al.
MICCAI 2022 - 25th International Conference on Medical Image Computing and Computer Assisted Intervention, Locally supervised learning; Whole slide image; Multiple instance learning; Classification, Sep 2022, Singapore, Singapore. pp.192-201, ⟨10.1007/978-3-031-16434-7_19⟩
Communication dans un congrès hal-03939232v1
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Graph-Based Registration, Change Detection, and Classification in Very High Resolution Multitemporal Remote Sensing Data

Maria Vakalopoulou , Konstantinos Karantzalos , Nikos Komodakis , Nikos Paragios
IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, 2016, 9, pp.2940 - 2951. ⟨10.1109/JSTARS.2016.2557081⟩
Article dans une revue hal-01413419v1

Radiomics to predict outcomes and abscopal response of patients with cancer treated with immunotherapy combined with radiotherapy using a validated signature of CD8 cells

Roger Sun , Nora Sundahl , Markus Hecht , Florian Putz , Andrea Lancia , et al.
Journal for Immunotherapy of Cancer, 2020, 8 (2), pp.e001429. ⟨10.1136/jitc-2020-001429⟩
Article dans une revue hal-03133258v1

Differentiable Gamma Index-Based Loss Functions: Accelerating Monte-Carlo Radiotherapy Dose Simulation

Sonia Martinot , Nikos Komodakis , Maria Vakalopoulou , Norbert Bus , Charlotte Robert , et al.
Information Processing in Medical Imaging, Jun 2023, San Carlos De Bariloche, Argentina. pp.485-496, ⟨10.1007/978-3-031-34048-2_37⟩
Communication dans un congrès hal-04392320v1
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Standardization of brain MR images across machines and protocols: bridging the gap for MRI-based radiomics

Alexandre Carré , Guillaume Klausner , Myriam Edjlali , Marvin Lerousseau , Jade Briend-Diop , et al.
Scientific Reports, 2020, 10 (1), pp.12340. ⟨10.1038/s41598-020-69298-z⟩
Article dans une revue inserm-02943189v1

Self-Supervised Representation Learning using Visual Field Expansion on Digital Pathology

Joseph Boyd , Mykola Liashuha , Eric Deutsch , Nikos Paragios , Stergios Christodoulidis , et al.
2021 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW), Oct 2021, Montreal, Canada. pp.639-647, ⟨10.1109/ICCVW54120.2021.00077⟩
Communication dans un congrès hal-03448192v1
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Deep learning: basics and convolutional neural networks (CNN)

Maria Vakalopoulou , Stergios Christodoulidis , Ninon Burgos , Olivier Colliot , Vincent Lepetit
Olivier Colliot. Machine Learning for Brain Disorders, Springer, 2023, ⟨10.1007/978-1-0716-3195-9_3⟩
Chapitre d'ouvrage hal-03957224v2

Deep learning: definition and perspectives for thoracic imaging

Maria Vakalopoulou , Guillaume Chassagnon , Nikos Paragios , Marie-Pierre Revel
European Radiology, 2019, 30, p. 2021-2030. ⟨10.1007/s00330-019-06564-3⟩
Article dans une revue hal-02422513v1
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Stacked Encoder-Decoders for Accurate Semantic Segmentation of Very High Resolution Satellite Datasets

Maria Papadomanolaki , Maria Vakalopoulou , Nikos Paragios , Konstantinos Karantzalos
IGARSS 2018 - 38th annual International Geoscience and Remote Sensing Symposium, Jul 2018, Valencia, Spain. pp.1-4
Communication dans un congrès hal-01870857v1
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U-ReSNet: Ultimate Coupling of Registration and Segmentation with Deep Nets

Théo Estienne , Maria Vakalopoulou , Stergios Christodoulidis , Enzo Battistella , Marvin Lerousseau , et al.
MICCAI 2019: Medical Image Computing and Computer Assisted Intervention – MICCAI 2019, MICCAI, Oct 2019, Shenzhen, China. pp.310-319, ⟨10.1007/978-3-030-32248-9_35⟩
Communication dans un congrès hal-02365899v2
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Deep patch-based priors under a fully convolutional encoder-decoder architecture for interstitial lung disease segmentation

Maria Vakalopoulou , Guillaume Chassagnon , Nikos Paragios , Marie-Pierre Revel , Evangelia I. Zacharaki
ISBI’18 - IEEE International Symposium on Biomedical Imaging, Apr 2018, Washington, D.C., United States
Communication dans un congrès hal-01721714v1
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Deep Reinforcement Learning for L3 Slice Localization in Sarcopenia Assessment

Othmane Laousy , Guillaume Chassagnon , Edouard Oyallon , Nikos Paragios , Marie-Pierre Revel , et al.
Machine Learning in Medical Imaging @MICCAI, Sep 2021, Strasbourg, France. pp.317-326, ⟨10.1007/978-3-030-87589-3_33⟩
Communication dans un congrès hal-03532954v1