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Number of documents

34

CV de Maria Barbi


Journal articles30 documents

  • Timothy Foldes, Antony Lesage, Maria Barbi. Assessing the polymer coil-globule state from the very first spectral modes. Physical Review Letters, American Physical Society, 2021, ⟨10.1103/PhysRevLett.127.277801⟩. ⟨hal-03466632⟩
  • Antony Lesage, Vincent Dahirel, Jean-Marc Victor, Maria Barbi. Polymer coil–globule phase transition is a universal folding principle of Drosophila epigenetic domains. Epigenetics & Chromatin, BioMed Central, 2019, 12 (1), ⟨10.1186/s13072-019-0269-6⟩. ⟨hal-02147100⟩
  • Maria Barbi, Annick Lesne, Julien Mozziconacci, Jean Marc Victor. Chromosomes : étonnants polymères !. Reflets de la Physique, EDP sciences, 2018, pp.10-15. ⟨10.1051/refdp/201857010⟩. ⟨hal-03518411⟩
  • Ruggero Cortini, Maria Barbi, Bertrand Caré, Christophe Lavelle, Annick Lesne, et al.. The physics of epigenetics. Reviews of Modern Physics, American Physical Society, 2016, 88 (2), ⟨10.1103/RevModPhys.88.025002⟩. ⟨hal-03510200⟩
  • Maria Barbi, Guillaume Blanc, Florence Elias, Sylvain Fautrat, C. de Hosson, et al.. Enseigner la physique à l’université. Colloque régional, 6-7 juillet 2015 – Paris. Reflets de la Physique, EDP sciences, 2015. ⟨hal-01663268⟩
  • Ruggero Cortini, Bertrand Caré, Jean-Marc Victor, Maria Barbi. Theory and simulations of toroidal and rod-like structures in single-molecule DNA condensation. Journal of Chemical Physics, American Institute of Physics, 2015, 142 (10), pp.105102. ⟨10.1063/1.4914513⟩. ⟨hal-03510145⟩
  • Maria Barbi, Julien Mozziconacci, Hua Wong, Jean-Marc Victor. DNA topology in chromosomes: a quantitative survey and its physiological implications. Journal of Mathematical Biology, Springer Verlag (Germany), 2014, 68 (1-2), pp.145-179. ⟨10.1007/s00285-012-0621-y⟩. ⟨hal-03510117⟩
  • Pascal Carrivain, Maria Barbi, Jean-Marc Victor. In Silico Single-Molecule Manipulation of DNA with Rigid Body Dynamics. PLoS Computational Biology, Public Library of Science, 2014, 10 (2), ⟨10.1371/journal.pcbi.1003456⟩. ⟨hal-01342589⟩
  • Pascal Carrivain, Axel Cournac, Christophe Lavelle, Annick Lesne, Julien Mozziconacci, et al.. Electrostatics of DNA compaction in viruses, bacteria and eukaryotes: functional insights and evolutionary perspective. Soft Matter, Royal Society of Chemistry, 2012, 8 (36), pp.9285. ⟨10.1039/C2SM25789K⟩. ⟨hal-03510086⟩
  • Jean Marc Victor, Jordanka Zlatanova, Maria Barbi, Julien Mozziconacci. Pulling chromatin apart: Unstacking or Unwrapping?. BMC Biophysics, BioMed Central, 2012, 5 (1), ⟨10.1186/2046-1682-5-21⟩. ⟨hal-03510102⟩
  • Maria Barbi, Julien Mozziconacci, Jean-Marc Victor, Hua Wong, Christophe Lavelle. On the topology of chromatin fibres. Interface Focus, Royal Society publishing, 2012, 2 (5), pp.546-554. ⟨10.1098/rsfs.2011.0101⟩. ⟨hal-03510056⟩
  • Fabien Paillusson, Vincent Dahirel, Marie Jardat, Jean-Marc Victor, Maria Barbi. Effective interaction between charged nanoparticles and DNA. Physical Chemistry Chemical Physics, Royal Society of Chemistry, 2011, 13 (27), pp.12603. ⟨10.1039/c1cp20324j⟩. ⟨hal-03510036⟩
  • Christophe Lavelle, Aurélien Bancaud, Pierre Recouvreux, Maria Barbi, Jean-Marc Victor, et al.. Chromatin topological transitions. Progress of Theoretical Physics Supplement, 2011, 191, pp.30-39. ⟨hal-01053106⟩
  • Pierre Recouvreux, Christophe Lavelle, Maria Barbi, Natalia Conde E Silva, Eric Le Cam, et al.. Linker histones incorporation maintains chromatin fiber plasticity.. Biophysical Journal, Biophysical Society, 2011, 100 (11), pp.2726-35. ⟨10.1016/j.bpj.2011.03.064⟩. ⟨hal-00625637⟩
  • Christophe Bécavin, Maria Barbi, Jean-Marc Victor, Annick Lesne. Transcription within Condensed Chromatin: Steric Hindrance Facilitates Elongation. Biophysical Journal, Biophysical Society, 2010, 98 (5), pp.824-833. ⟨10.1016/j.bpj.2009.10.054⟩. ⟨hal-03510014⟩
  • Vincent Dahirel, Fabien Paillusson, Marie Jardat, Maria Barbi, Jean-Marc Victor. Nonspecific DNA-Protein Interaction: Why Proteins Can Diffuse along DNA. Physical Review Letters, American Physical Society, 2009, 102 (22), ⟨10.1103/PhysRevLett.102.228101⟩. ⟨hal-03509993⟩
  • Jean-Marc Victor, Maria Barbi, Fabien Paillusson. Poisson-Boltzmann for oppositely charged bodies: an explicit derivation. Molecular Physics, Taylor & Francis, 2009, 107 (13), pp.1379-1391. ⟨10.1080/00268970902893156⟩. ⟨hal-00513286⟩
  • Aurélien Bancaud, Gaudeline Wagner, Natalia Conde E Silva, Christophe Lavelle, Hua Wong, et al.. Nucleosome chiral transition under positive torsional stress in single chromatin fibers.. Molecular Cell, Elsevier, 2007, 27 (1), pp.135-47. ⟨10.1016/j.molcel.2007.05.037⟩. ⟨hal-00181873⟩
  • Aurélien Bancaud, Gaudeline Wagner, Natalia Conde E Silva, Christophe Lavelle, Hua Wong, et al.. Nucleosome Chiral Transition under Positive Torsional Stress in Single Chromatin Fibers. Molecular Cell, Elsevier, 2007, 27 (1), pp.135-147. ⟨10.1016/j.molcel.2007.05.037⟩. ⟨hal-03065273⟩
  • Julien Mozziconacci, Christophe Lavelle, Maria Barbi, Annick Lesne, Jean-Marc Victor. A physical model for the condensation and decondensation of eukaryotic chromosomes. FEBS Letters, Wiley, 2006, 580 (2), pp.368-372. ⟨10.1016/j.febslet.2005.12.053⟩. ⟨hal-03509975⟩
  • Aurélien Bancaud, Natalia Conde E Silva, Maria Barbi, Gaudeline Wagner, Jean-François Allemand, et al.. Structural plasticity of single chromatin fibers revealed by torsional manipulation.. Nature Structural and Molecular Biology, Nature Publishing Group, 2006, 13, pp.444-450. ⟨10.1038/nsmb1087⟩. ⟨hal-00090147⟩
  • Maria Barbi, Julien Mozziconacci, Jean-Marc Victor. How does the chromatin fiber deal with topological constraints?. Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, American Physical Society, 2005, 71, pp.031910. ⟨10.1103/PhysRevE.71.031910⟩. ⟨hal-00012986⟩
  • Maria Barbi, Christophe Place, Vladislav Popkov, Mario Salerno. A Model of Sequence Dependent Protein Diffusion Along Dna. Journal of Biological Physics, Springer Verlag, 2004, 30,no.3, pp.203-226. ⟨10.1023/B:JOBP.0000046728.51620.14⟩. ⟨hal-00012987⟩
  • Maria Barbi, Christophe Place, Vladislav Popkov, Mario Salerno. Base-sequence-dependent sliding of proteins on DNA. Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, American Physical Society, 2004, 70, pp.041901. ⟨hal-00003424⟩
  • Maria Barbi, Stefano Lepri, Michel Peyrard, Nikos Theodorakopoulos. Thermal denaturation of a helicoidal DNA model. Physical Review E , American Physical Society (APS), 2003, 68 (6), ⟨10.1103/PhysRevE.68.061909⟩. ⟨hal-03509963⟩
  • Maria Barbi, Mario Salerno. Stabilization of ratchet dynamics by weak periodic signals. Physical Review E , American Physical Society (APS), 2001, 63 (6), ⟨10.1103/PhysRevE.63.066212⟩. ⟨hal-03509953⟩
  • Maria Barbi, Mario Salerno. Phase locking effect and current reversals in deterministic underdamped ratchets. Physical Review E , American Physical Society (APS), 2000, 62 (2), pp.1988-1994. ⟨10.1103/PhysRevE.62.1988⟩. ⟨hal-03509593⟩
  • Simona Cocco, Maria Barbi, Michel Peyrard. Vector nonlinear Klein-Gordon lattices: General derivation of small amplitude envelope soliton solutions. Physics Letters A, Elsevier, 1999, 253 (3-4), pp.161-167. ⟨10.1016/S0375-9601(99)00058-4⟩. ⟨hal-03509237⟩
  • Maria Barbi, Simona Cocco, Michel Peyrard, Stefano Ruffo. A Twist Opening Model for DNA. Journal of Biological Physics, Springer Verlag, 1999, 24 (2/4), pp.97-114. ⟨10.1023/A:1005139326775⟩. ⟨hal-03509228⟩
  • P. Allegrini, Maria Barbi, P. Grigolini, B. West. Dynamical model for DNA sequences. Physical Review E , American Physical Society (APS), 1995, 52 (5), pp.5281-5296. ⟨10.1103/PhysRevE.52.5281⟩. ⟨hal-03509184⟩

Conference papers1 document

Book sections3 documents