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Magali Richard

17
Documents

Publications

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Pacpaint: a histology-based deep learning model uncovers the extensive intratumor molecular heterogeneity of pancreatic adenocarcinoma

Charlie Saillard , Flore Delecourt , Benoit Schmauch , Olivier Moindrot , Magali Svrcek
Nature Communications, 2023, 14 (1), pp.3459. ⟨10.1038/s41467-023-39026-y⟩
Article dans une revue hal-04164254v1
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Codabench: Flexible, Easy-to-Use and Reproducible Meta-Benchmark Platform

Zhen Xu , Sergio Escalera , Adrien Pavao , Magali Richard , Wei-Wei Tu
Patterns, 2022, 3 (7), pp.100543. ⟨10.1016/j.patter.2022.100543⟩
Article dans une revue hal-03374222v4
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DECONbench: a benchmarking platform dedicated to deconvolution methods for tumor heterogeneity quantification

Clémentine Decamps , Alexis Arnaud , Florent Petitprez , Mira Ayadi , Aurélia Baurès
BMC Bioinformatics, 2021, 22 (1), pp.473. ⟨10.1186/s12859-021-04381-4⟩
Article dans une revue hal-03372668v1
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PenDA, a rank-based method for personalized differential analysis: Application to lung cancer

Magali Richard , Clémentine Decamps , Florent Chuffart , Elisabeth Brambilla , Sophie Rousseaux
PLoS Computational Biology, 2020, 16 (5), pp.e1007869. ⟨10.1371/journal.pcbi.1007869⟩
Article dans une revue inserm-02868566v1
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Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software

Clémentine Decamps , Florian Privé , Raphael Bacher , Daniel Jost , Arthur Waguet
BMC Bioinformatics, 2020, 21 (1), ⟨10.1186/s12859-019-3307-2⟩
Article dans une revue hal-02997889v1
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Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software

Clémentine Decamps , Florian Privé , Raphael Bacher , Daniel Jost , Arthur Waguet
BMC Bioinformatics, 2020, 21 (1), ⟨10.1186/s12859-019-3307-2⟩
Article dans une revue hal-03012777v1
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CRELD1 is an evolutionarily-conserved maturational enhancer of ionotropic acetylcholine receptors

Manuela d'Alessandro , Magali Richard , Christian Stigloher , Vincent Gache , Thomas Boulin
Article dans une revue hal-02009626v1
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Assigning function to natural allelic variation via dynamic modeling of gene network induction

Magali Richard , Florent Chuffart , Hélène Duplus‐bottin , Fanny Pouyet , Martin Spichty
Molecular Systems Biology, 2018, 14 (1), pp.e7803. ⟨10.15252/msb.20177803⟩
Article dans une revue hal-01976613v1

CRELD1 is an evolutionarily-conserved maturational enhancer of ionotropic acetylcholine receptors

Manuela d'Alessandro , Magali Richard , Christian Stigloher , Vincent Gache , Thomas Boulin
Article dans une revue hal-03369468v1

Genomics of cellular proliferation in periodic environmental fluctuations

Jérôme Salignon , Magali Richard , Etienne Fulcrand , Hélène Duplus‐bottin , Gaël Yvert
Molecular Systems Biology, 2018, 14 (3), pp.e7823
Article dans une revue hal-02009632v1

Exploiting Single-Cell Quantitative Data to Map Genetic Variants Having Probabilistic Effects

Florent Chuffart , Magali Richard , Daniel Jost , Claire Burny , Hélène Duplus-Bottin
PLoS Genetics, 2016, 12 (8), pp.e1006213
Article dans une revue hal-01976590v1
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How does evolution tune biological noise?

Magali Richard , Gaël Yvert
Frontiers in Genetics, 2014, ⟨10.3389/fgene.2014.00374⟩
Article dans une revue ensl-01224442v1

Biosynthesis of ionotropic acetylcholine receptors requires the evolutionarily conserved ER membrane complex

Magali Richard , Thomas Boulin , Valérie Robert , Janet Richmond , Jean-Louis Bessereau
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (11), pp.E1055-E1063. ⟨10.1073/pnas.1216154110⟩
Article dans une revue hal-03369480v1

Redefining phenotypic heterogeneity of pancreatic ductal adenocarcinoma: A bottom-up approach

Marc Hilmi , Flore Delecourt , Jerôme Rafenne , Taib Bourega , Nelson Dusetti
AACR Special Conference in Cancer Research: Pancreatic Cancer; 2023 Sep 27-30; Boston, Massachusetts., Sep 2023, Boston, United States. pp.B064-B064, ⟨10.1158/1538-7445.panca2023-b064⟩
Communication dans un congrès hal-04456752v1
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Retour d'expérience concernant le data challenge épigénétique et médiation à large échelle d'Aussois

Sophie Achard , Dylan Aïssi , Michael Blum , Kevin Caye , Florent Chuffart
CFIES 2017 - Colloque Francophone International sur l’Enseignement de la Statistique, Sep 2017, Grenoble, France
Communication dans un congrès hal-03881657v1