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Pierre Jacob, Gwilherm Brisou, Marion Dalmais, Johanne Thévenin, Froukje van Der Wal, et al.. The Seed Development Factors TT2 and MYB5 Regulate Heat Stress Response in Arabidopsis. Genes, MDPI, 2021, 12 (5), pp.1-18. ⟨10.3390/genes12050746⟩. ⟨hal-03335244⟩

Camille Salaün, Loïc Lepiniec, Bertrand Dubreucq. Genetic and Molecular Control of Somatic Embryogenesis. Plants, MDPI, 2021, 10 (7), pp.1467. ⟨10.3390/plants10071467⟩. ⟨hal-03754308⟩

Yajin Ye, Krisztina Nikovics, Alexandra To, Loic Lepiniec, Eric T Fedosejevs, et al.. Docking of acetyl-CoA carboxylase to the plastid envelope membrane attenuates fatty acid production in plants. Nature Communications, Nature Publishing Group, 2020, 11 (1), ⟨10.1038/s41467-020-20014-5⟩. ⟨hal-03327726⟩

Sami Kazaz, Guillaume Barthole, Frédéric Domergue, Hasna Ettaki, Alexandra To, et al.. Differential Activation of Partially Redundant Δ9 Stearoyl-ACP Desaturase Genes Is Critical for Omega-9 Monounsaturated Fatty Acid Biosynthesis During Seed Development in Arabidopsis. The Plant cell, American Society of Plant Biologists (ASPB), 2020, 32 (11), pp.3613-3637. ⟨10.1105/tpc.20.00554⟩. ⟨hal-02996686⟩

Olivier Coen, Jing Lu, Wenjia Xu, Stéphanie Pateyron, Damaris Grain, et al.. A TRANSPARENT TESTA Transcriptional Module Regulates Endothelium Polarity. Frontiers in Plant Science, Frontiers, 2020, 10, ⟨10.3389/fpls.2019.01801⟩. ⟨hal-02532780⟩

Alexandra To, Jérôme Joubès, Jean Thueux, Sami Kazaz, Loic Lepiniec, et al.. AtMYB92 enhances fatty acid synthesis and suberin deposition in leaves of Nicotiana benthamiana. Plant Journal, Wiley, 2020, 103 (2), pp.660-676. ⟨10.1111/tpj.14759⟩. ⟨hal-03004236⟩

Keith Adams, Wagner Araújo, Sebastien Aubourg, Sacha Baginsky, Erica Bakker, et al.. Current status of the multinational Arabidopsis community. Plant Direct, 2020, 4 (7), pp.e00248. ⟨10.1002/pld3.248⟩. ⟨hal-02927028⟩

Massimiliano Corso, François Perreau, Gregory Mouille, Loïc Lepiniec. Specialized phenolic compounds in seeds: structures, functions, and regulations. Plant Science, Elsevier, 2020, 296, pp.110471. ⟨10.1016/j.plantsci.2020.110471⟩. ⟨hal-02861169⟩

Olivier Coen, Jing Lu, Wenjia Xu, Delphine de Vos, Christine Péchoux, et al.. Deposition of a cutin apoplastic barrier separating seed maternal and zygotic tissues. BMC Plant Biology, BioMed Central, 2019, 19, pp.1-20. ⟨10.1186/s12870-019-1877-9⟩. ⟨hal-02368066⟩

Charlotte Miller, Rachel Wells, Neil Mckenzie, Martin Trick, Joshua Ball, et al.. Variation in expression of the HECT E3 ligase UPL3 modulates LEC2 levels, seed size, and crop yields in brassica napus. The Plant cell, American Society of Plant Biologists (ASPB), 2019, 31 (10), pp.2370-2385. ⟨10.1105/tpc.18.00577⟩. ⟨hal-02622699⟩

Thomas James Roscoe, Virginie Vaissayre, Gaël Paszkiewicz, Fernando Clavijo, Zsolt Kelemen, et al.. Regulation of FUSCA3 Expression During Seed Development in Arabidopsis. Plant and Cell Physiology, Oxford University Press (OUP), 2019, 60 (2), pp.476-487. ⟨10.1093/pcp/pcy224⟩. ⟨hal-02386031⟩

Gwyneth Ingram, Helen H. North, Loic Lepiniec. Seeds as perfect factories for developing sustainable agriculture. Sexual Plant Reproduction, Springer Verlag, 2018, 31 (3), pp.201-202. ⟨10.1007/s00497-018-0340-7⟩. ⟨hal-02349680⟩

Sébastien Baud, Hasna Ettaki, Manuel Adrián Troncoso-Ponce, Alexandra A. To, Guillaume Barthole, et al.. Overexpression of MYB115, AAD2, or AAD3 in Arabidopsis thaliana seeds yields contrasting omega-7 contents. PLoS ONE, Public Library of Science, 2018, 13 (1), pp.e0192156. ⟨10.1371/journal.pone.0192156⟩. ⟨hal-02356207⟩

Edith Francoz, Loic Lepiniec, Helen North. Seed coats as an alternative molecular factory: thinking outside the box. Sexual Plant Reproduction, Springer Verlag, 2018, 31 (3), pp.327-342. ⟨10.1007/s00497-018-0345-2⟩. ⟨hal-02627507⟩

Kaori Sakai, Ludivine Taconnat, Néro Borrega, Jennifer Yansouni, Véronique Brunaud, et al.. Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo. Plant Methods, BioMed Central, 2018, 14, pp.10. ⟨10.1186/s13007-018-0275-x⟩. ⟨hal-02625394⟩

Olivier Coen, Elisa Fiume, Wenjia Xu, Delphine de Vos, Jing Lu, et al.. Developmental patterning of the sub-epidermal integument cell layer in Arabidopsis seeds. Development (Cambridge, England), Company of Biologists, 2017, 144 (8), pp.1490-1497. ⟨10.1242/dev.146274⟩. ⟨hal-01605168⟩

Elisa Fiume, Olivier Coen, Wenjia Xu, Loic Lepiniec, Enrico Magnani. Growth of the Arabidopsis sub-epidermal integument cell layers might require an endosperm signal. Plant Signaling and Behavior, Taylor & Francis, 2017, 12 (8), ⟨10.1080/15592324.2017.1339000⟩. ⟨hal-02627557⟩

Wenjia Xu, Sophie Bobet, José Le Gourrierec, Damaris Grain, Délphine de Vos, et al.. TRANSPARENT TESTA 16 and 15 act through different mechanisms to control proanthocyanidin accumulation in Arabidopsis testa. Journal of Experimental Botany, Oxford University Press (OUP), 2017, 68 (11), ⟨10.1093/jxb/erx151⟩. ⟨hal-01536007⟩

Céline Boulard, Abdelhak Fatihi, Loic Lepiniec, Bertrand Dubreucq. Regulation and evolution of the interaction of the seed B3 transcription factors with NF-Y subunits. Biochimica et Biophysica Acta - Gene Regulatory Mechanisms , Elsevier, 2017, 1860 (10), pp.1069-1078. ⟨10.1016/j.bbagrm.2017.08.008⟩. ⟨hal-02627256⟩

Elisa Fiume, Olivier Coen, Wenjia Xu, Loic Lepiniec, Enrico Magnani. Developmental patterning of sub-epidermal cells in the outer integument of Arabidopsis seeds. PLoS ONE, Public Library of Science, 2017, 12 (11), pp.1-10. ⟨10.1371/journal.pone.0188148⟩. ⟨hal-02628553⟩

Enrico Magnani, José Jimenez-Gomez, Ludivine Soubigou-Taconnat, Loic Lepiniec, Elisa Fiume. Profiling the onset of somatic embryogenesis in Arabidopsis. BMC Genomics, BioMed Central, 2017, 18, pp.998. ⟨10.1186/s12864-017-4391-1⟩. ⟨hal-02624612⟩

Sébastien Baud, Abdelhak Fatihi, Celine Boulard, Daniel Bouyer, Sebastien S. Baud, et al.. Deciphering and modifying LAFL transcriptional regulatory network in seed for improving yield and quality of storage compounds. Plant Science, Elsevier, 2016, 250, pp.198-204. ⟨10.1016/j.plantsci.2016.06.013⟩. ⟨hal-02356216⟩

Wenjia Xu, Elisa Fiume, Olivier Coen, Christine Longin-Péchoux, Loic Lepiniec, et al.. Endosperm and nucellus develop antagonistically in arabidopsis seeds. The Plant cell, American Society of Plant Biologists (ASPB), 2016, 28 (6), pp.1343-1360. ⟨10.1105/tpc.16.00041⟩. ⟨hal-02638721⟩

Sebastien S. Baud, Zsolt Kelemen, Johanne Thévenin, Céline Boulard, Sandrine Blanchet, et al.. Deciphering the molecular mechanisms underpinning the transcriptional control of gene expression by L-AFL proteins in Arabidopsis seed.. Plant Physiology, Oxford University Press ; American Society of Plant Biologists, 2016, 171 (171), pp.1099-1112. ⟨10.1104/pp.16.00034⟩. ⟨hal-01406124⟩

Manuel Troncoso Ponce, Guillaume G. Barthole, Geoffrey Tremblais, Alexandra To, Martine Miquel, et al.. Transcriptional Activation of two Delta-9 Palmitoyl-ACP desaturase genes by MYB115 and MYB118 is critical for biosynthesis of omega-7 monounsaturated fatty acids in the endosperm of Arabidopsis seeds. The Plant cell, American Society of Plant Biologists (ASPB), 2016, 28 (10), pp.2666-2682. ⟨10.1105/tpc.16.00612⟩. ⟨hal-02636598⟩

Elisa Fiume, Virginie Guyon, Carine Remoue, Enrico Magnani, Martine Miquel, et al.. TWS1, a novel small protein, regulates various aspects of seed and plant development. Plant Physiology, Oxford University Press ; American Society of Plant Biologists, 2016, 172 (3), pp.1732-1745. ⟨10.1104/pp.16.00915⟩. ⟨hal-01604885⟩

Manuel Adrián Troncoso Ponce, Krisztina Nikovics, Chloé Marchive, Loïc Lepiniec, Sebastien S. Baud. New insights on the organization and regulation of the fatty acid biosynthetic network in the model higher plant Arabidopsis thaliana. Biochimie, Elsevier, 2016, 120, pp.3-8. ⟨10.1016/j.biochi.2015.05.013⟩. ⟨hal-01532525⟩

Johanne Thévenin, Wenjia Xu, Louise Vaisman, Loic Lepiniec, Bertrand Dubreucq, et al.. The Physcomitrella patens System for Transient Gene Expression Assays.. Methods in Molecular Biology, Humana Press/Springer Imprint, 2016, 1482, pp.151-61. ⟨10.1007/978-1-4939-6396-6_10⟩. ⟨hal-01389059⟩

Yuan Shen, Martine Devic, Loic L. Lepiniec, Dao-Xiu Zhou. Chromodomain, Helicase and DNA-binding CHD1 protein, CHR5, are involved in establishing active chromatin state of seed maturation genes. Plant Biotechnology Journal, Wiley, 2015, 13 (6), pp.811 - 820. ⟨10.1111/pbi.12315⟩. ⟨hal-02633217⟩

Wenjia Xu, Christian Dubos, Loïc Lepiniec. Transcriptional control of flavonoid biosynthesis by MYB–bHLH–WDR complexes. Trends in Plant Science, Elsevier, 2015, 20 (3), pp.176-185. ⟨10.1016/j.tplants.2014.12.001⟩. ⟨hal-01141105⟩

Zsolt Kelemen, Alvaro Sebastian, Wenjia Xu, Damaris Grain, Fabien Salsac, et al.. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS ONE, Public Library of Science, 2015, 10 (10), pp.e0141044. ⟨10.1371/journal.pone.0141044⟩. ⟨hal-01837546⟩

Christian Dubos, Zsolt Kelemen, Alvaro Sebastian, Lorenz Buelow, Gunnar Huep, et al.. Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes. BMC Genomics, BioMed Central, 2014, 15, ⟨10.1186/1471-2164-15-317⟩. ⟨hal-01204055⟩

Wenjia Xu, Damaris Grain, Sophie Bobet, José Gentilhomme-Le Gourrierec, Johanne Thévenin, et al.. Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB-bHLH-WDR complexes and their targets in Arabidopsis seed.. New Phytologist, Wiley, 2014, 202 (1), pp.132-144. ⟨10.1111/nph.12620⟩. ⟨hal-01168792⟩

Wenjia Xu, Loic Lepiniec, Christian Dubos. New insights toward the transcriptional engineering of proanthocyanidin biosynthesis. Plant Signaling and Behavior, Taylor & Francis, 2014, 9 (4), pp.1-6. ⟨10.4161/psb.28736⟩. ⟨hal-01204122⟩

Guillaume Barthole, Alexandra To, Chloé Marchive, Veronique Brunaud, Ludivine Soubigou-Taconnat, et al.. MYB118 Represses Endosperm Maturation in Seeds of Arabidopsis. The Plant cell, American Society of Plant Biologists (ASPB), 2014, 26 (9), pp.3519 - 3537. ⟨10.1105/tpc.114.130021⟩. ⟨hal-01204153⟩

Chloé Marchivey, Krisztina Nikovicsy, Alexandra To, Loic Lepiniec, Sebastien S. Baud. Transcriptional regulation of fatty acid production in higher plants: Molecular bases and biotechnological outcomes. European Journal of Lipid Science and Technology, Wiley-VCH Verlag, 2014, 116 (10), pp.1332-1343. ⟨10.1002/ejlt.201400027⟩. ⟨hal-01204152⟩

Martine Miquel, Ghassen Trigui, Sabine d'Andrea, Zsolt Kelemen, Sebastien S. Baud, et al.. Specialization of oleosins in OB dynamics during seed development in Arabidopsis thaliana seeds.. Plant Physiology, Oxford University Press ; American Society of Plant Biologists, 2014, 164 (4), pp.1866-1878. ⟨10.1104/pp.113.233262⟩. ⟨hal-01019614⟩

Jan G. Schaart, Christian Dubos, Irene Romeo de La Fuente, Adèle M.M.L. van Houwelingen, Ric C.H. de Vos, et al.. Identification and characterization of MYB-bHLH-WD40 regulatory complexes controlling proanthocyanidin biosynthesis in strawberry (Fragaria 9 ananassa) fruits. New Phytologist, Wiley, 2013, 197 (2), pp.454-467. ⟨10.1111/nph.12017⟩. ⟨hal-01191263⟩

Wenjia Xu, Damaris Grain, José Le Gourrierec, Erwana Harscoët, Adeline Berger, et al.. Regulation of flavonoid biosynthesis involves an unexpected complex transcriptional regulation of TT8 expression, in Arabidopsis.. New Phytologist, Wiley, 2013, 198 (1), pp.59-70. ⟨10.1111/nph.12142⟩. ⟨hal-00921359⟩

Francisco Cubillos, Jennifer Yansouni, Ahmid Khalili, Sandrine Balzergue, Samira Elftieh, et al.. Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures. BMC Genomics, BioMed Central, 2012, 13, pp.1-12. ⟨10.1186/1471-2164-13-117⟩. ⟨hal-01189696⟩

Johanne Thévenin, Christian Dubos, Wenjia Xu, José Gentilhomme-Le Gourrierec, Zolt Kelemen, et al.. A new system for fast and quantitative analysis of heterologous gene expression in plants. New Phytologist, Wiley, 2012, 193 (2), pp.504 - 512. ⟨10.1111/j.1469-8137.2011.03936.x⟩. ⟨hal-01004263⟩

Guillaume Barthole, Loic Lepiniec, Peter Rogowsky, Sebastien S. Baud. Controlling lipid accumulation in cereal grains. Plant Science, Elsevier, 2012, 185, pp.33 - 39. ⟨10.1016/j.plantsci.2011.09.002⟩. ⟨hal-01003444⟩

Jean-Marc J.-M. Routaboul, Christian C. Dubos, Gilles G. Beck, Catherine C. Marques, Przemyslaw P. Bidzinski, et al.. Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis. Journal of Experimental Botany, Oxford University Press (OUP), 2012, 63 (10), pp.3749-3764. ⟨10.1093/jxb/ers067⟩. ⟨hal-01000367⟩

Fabienne Guillon, Colette Larre, Fabrice Petitpas, Adeline Berger, Jihad Moussawi, et al.. A comprehensive overview of grain development in Brachypodium distachyon variety Bd21. Journal of Experimental Botany, Oxford University Press (OUP), 2012, 63 (2), pp.739-755. ⟨10.1093/jxb/err298⟩. ⟨hal-01190419⟩

Alexandra A. To, Jerome J. Joubes, Guillaume G. Barthole, Alain A. Lecureuil, Aurélie A. Scagnelli, et al.. WRINKLED Transcription Factors Orchestrate Tissue-Specific Regulation of Fatty Acid Biosynthesis in Arabidopsis. The Plant cell, American Society of Plant Biologists (ASPB), 2012, 24 (12), pp.5007 - 5023. ⟨10.1105/tpc.112.106120⟩. ⟨hal-01004104⟩

Nathalie N. Berger, Bertrand B. Dubreucq, François Roudier, Christian C. Dubos, Loic L. Lepiniec. Transcriptional regulation of Arabidopsis LEAFY COTYLEDON2 involves RLE,a cis-element that regulates Trimethylation of Histone H3 at Lysine-27. The Plant cell, American Society of Plant Biologists (ASPB), 2011, 23 (11), pp.4065-4078. ⟨10.1105/tpc.111.087866⟩. ⟨hal-01000017⟩

Sebastien S. Baud, Ana Belen Feria Bourrellier, Marianne Azzopardi, Adeline Berger, Julie Dechorgnat, et al.. PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana. Plant Journal, Wiley, 2010, 64 (2), pp.291-303. ⟨10.1111/j.1365-313X.2010.04332.x⟩. ⟨hal-01203883⟩

Christian Dubos, Loic Lepiniec, Ralf Stracke, Erich Grotewold, Bernd Weisshaar, et al.. MYB transcription factors in Arabidopsis. Plant Science, Elsevier, 2010, 15 (10), pp.573-581. ⟨10.1016/j.tplants.2010.06.005⟩. ⟨hal-01203945⟩

Helen North, Sebastien S. Baud, Isabelle Debeaujon, Christian Dubos, Bertrand Dubreucq, et al.. Arabidopsis seed secrets unravelled after a decade of genetic and omics-driven research. Plant Journal, Wiley, 2010, 61 (6), pp.971-981. ⟨10.1111/j.1365-313X.2009.04095.x⟩. ⟨hal-01203892⟩

Sebastien S. Baud, Loic Lepiniec. Physiological and developmental regulation of seed oil production. Progress in Lipid Research, Elsevier, 2010, 49 (3), pp.235-249. ⟨10.1016/j.plipres.2010.01.001⟩. ⟨hal-01203879⟩

Erwana Harscoet, Bertrand Dubreucq, Jean-Christophe Palauqui, Loic Lepiniec. NOF1 encodes an arabidopsis protein involved in the control of rRNA expression. PLoS ONE, Public Library of Science, 2010, 5 (9), pp.e12829. ⟨10.1371/journal.pone.0012829⟩. ⟨hal-01203890⟩

Nathalie Nesi, Marie-Odile Lucas, Bathilde Auger, Cécile Baron, Alain A. Lecureuil, et al.. The promoter of the Arabidopsis thaliana BAN gene is active in proanthocyanidin-accumulating cells of the Brassica napus seed coat. Plant Cell Reports, Springer Verlag, 2009, 28 (4), pp.601-617. ⟨10.1007/s00299-008-0667-x⟩. ⟨hal-02662820⟩

Cristina Luceri, Lisa Giovannelli, Simona Toti, Cinzia Castagnini, Jean-Marc Routaboul, et al.. Liver and colon DNA oxidative damage and gene expression profiles of rats fed Arabidopsis thaliana mutant seeds containing contrasted flavonoids. Food and Chemical Toxicology, 2008, 46 (4), pp.1313-1220. ⟨10.1016/j.fct.2007.10.007⟩. ⟨hal-01203972⟩

Monica Santos-Mendoza, Bertrand Dubreucq, Sebastien S. Baud, François Parcy, Michel Caboche, et al.. Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis.. Plant Journal, Wiley, 2008, 54 (4), pp.608-20. ⟨10.1111/j.1365-313X.2008.03461.x⟩. ⟨hal-00297574⟩

Christian Dubos, Jose-Sabrina Le Gourrierec, Antoine Baudry, Gunnar Huep, Elodie Lanet, et al.. MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana. Plant Journal, Wiley, 2008, 55, pp.940-953. ⟨10.1111/j.1365-313X.2008.03564.x⟩. ⟨hal-01203970⟩

Maria Berdasco, Rubén Alcázar, María Victoria García-Ortiz, Esteban Ballestar, Agustín F Fernández, et al.. Promoter DNA hypermethylation and gene repression in undifferentiated Arabidopsis cells. PLoS ONE, Public Library of Science, 2008, 3 (10), pp.e3306. ⟨10.1371/journal.pone.0003306⟩. ⟨hal-02661856⟩

Lucille Pourcel, Jean-Marc Routaboul, Veronique V. Cheynier, Loic L. Lepiniec, Isabelle Debeaujon. Flavonoid oxidation in plants: from biochemical properties to physiological functions. Trends in Plant Science, Elsevier, 2007, 12 (1), pp.29-36. ⟨10.1016/j.tplants.2006.11.006⟩. ⟨hal-02669059⟩

Sebastien S. Baud, Sylvie Wuilleme, Bertrand B. Dubreucq, Aurélie de Almeida, Cindy Vuagnat, et al.. Function of plastidial pyruvate kinases in seeds of Arabidopsis thaliana. Plant Journal, Wiley, 2007, 52 (3), pp.405-419. ⟨10.1111/j.1365-313X.2007.03232.x⟩. ⟨hal-02661879⟩

Sebastien S. Baud, Monica Santos Mendoza, Alexandra A. To, Erwana E. Harscoet, Loic L. Lepiniec, et al.. WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis. Plant Journal, Wiley, 2007, 50 (5), pp.825-838. ⟨10.1111/j.1365-313X.2007.03092.x⟩. ⟨hal-02664890⟩

Sabine d'Andrea, Michel Canonge, Athanastos Beopoulos, Pascale Jolivet, Marie-Andrée Hartmann, et al.. At5g50600 encodes a member of the short-chain dehydrogenase reductase superfamily with 11 β- and 17 β-hydroxy steroid dehydrogenase activities associated with Arabidopsis thaliana seed oil bodies. Biochimie, Elsevier, 2007, 89 (2), pp.222-229. ⟨10.1016/j.biochi.2006.09.013⟩. ⟨hal-02668841⟩

Loic L. Lepiniec, Isabelle Debeaujon, Jean-Marc J.-M. Routaboul, Antoine Baudry, Lucille Pourcel, et al.. Genetics and biochemistry of seed flavonoids. Annual Review of Plant Biology, Annual Reviews, 2006, 57, pp.405-430. ⟨10.1146/annurev.arplant.57.032905.105252⟩. ⟨hal-02657414⟩

Antoine Baudry, Michel M. Caboche, Loic L. Lepiniec. TT8 controls its own expression in a feedback regulation involving TTG1 and homologous MYB and bHLH factors, allowing a strong and cell-specific accumulation of flavonoids in Arabidopsis thaliana. Plant Journal, Wiley, 2006, 46 (5), pp.768-779. ⟨10.1111/j.1365-313X.2006.02733.x⟩. ⟨hal-02669092⟩

Lucien Kerhoas, Denya Aouak, Annabelle Cingöz, Jean-Marc Routaboul, Loic L. Lepiniec, et al.. Structural characterization of the major flavonoid glycosides from Arabidopsis thaliana seeds. Journal of Agricultural and Food Chemistry, American Chemical Society, 2006, 54 (18), pp.6603-6612. ⟨10.1021/jf061043n⟩. ⟨hal-02666587⟩

Noriko Tamura, Takahiro Yoshida, Arata Tanaka, Ryuta Sasaki, Asuka Bando, et al.. Isolation and characterization of high temperature-resistant germination mutants of Arabidopsis thaliana. Plant and Cell Physiology, Oxford University Press (OUP), 2006, 47 (8), pp.1081-1094. ⟨hal-02660259⟩

Jean-Marc Routaboul, Lucien Kerhoas, Isabelle Debeaujon, Lucille Pourcel, Michel M. Caboche, et al.. Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana. Planta, Springer Verlag, 2006, 224 (1), pp.96-107. ⟨10.1007/s00425-005-0197-5⟩. ⟨hal-02669181⟩

Sebastien S. Baud, Sylvie Wuilleme, Rémi Lemoine, Jocelyne Kronenberger, Michel Caboche, et al.. The AtSUC5 sucrose transporter specifically expressed in the endosperm is involved in early seed development in Arabidopsis. Plant Journal, Wiley, 2005, 43 (6), pp.824-836. ⟨10.1111/j.1365-313X.2005.02496.x⟩. ⟨hal-00078925⟩

Monica Santos-Mendoza, Bertrand B. Dubreucq, Martine Miquel, Michel M. Caboche, Loic L. Lepiniec. LEAFY COTYLEDON 2 activation is sufficient to trigger the accumulation of oil and seed specific mRNAs in Arabidopsis leaves. FEBS Letters, Wiley, 2005, 579 (21), pp.4666-4670. ⟨10.1016/j.febslet.2005.07.037⟩. ⟨hal-02682706⟩

Lucille Pourcel, Jean-Marc Routaboul, Lucien Kerhoas, Michel M. Caboche, Loic L. Lepiniec, et al.. TRANSPARENT TESTA10 encodes a laccase-like enzyme involved in oxidative polymerization of flavonoids in Arabidopsis seed coat. The Plant cell, American Society of Plant Biologists (ASPB), 2005, 17 (11), pp.2966-2980. ⟨hal-02683033⟩

Sebastien S. Baud, Yannick Bellec, C. Miquel, Catherine C. Bellini, Michel M. Caboche, et al.. Gurke and pasticcino3 mutants affected in embryo development are impaired in acetyl-CoA carboxylase. EMBO Reports, EMBO Press, 2004, 5 (5), pp.515-520. ⟨10.1038/sj.embor.7400124⟩. ⟨hal-02682755⟩

A. Baudry, M.A. Heim, Bertrand B. Dubreucq, B. Weisshaar, Loic L. Lepiniec. TT2, TT8 and TTG1 synergistically specify the expression of BANYULS and proanthocyanidin biosynthesis in Arabidopsis. Plant Journal, Wiley, 2004, 39 (3), pp.366-380. ⟨10.1111/j.1365-313X.2004.02138.x⟩. ⟨hal-02683484⟩

Loic L. Lepiniec, M. Thomas, J. Vidal. From enzyme activity to plant biotechnology: 30 years of research on phosphoenolpyruvate carboxylase. Plant Physiology and Biochemistry, Elsevier, 2003, 41, pp.533-539. ⟨10.1016/S0981-9428(03)00069-X⟩. ⟨hal-02681866⟩

Sebastien S. Baud, Virginie Guyon, Jocelyne Kronenberger, Sylvie Wuillème, Martine Miquel, et al.. Multifonctional acetyl-CoA carboxylase 1 is essential for very long chain fatty acid elongation and embryo development in Arabidopsis. Plant Journal, Wiley, 2003, 33, pp.75-86. ⟨hal-02676403⟩

Nathalie Nesi, Isabelle Debeaujon, C. Jond, A.J. Stewart, G.I. Jenkins, et al.. The transparent TESTA16 locus encodes the Arabidopsis Bsister Mads domain protein and is required for proper development and pigmentation of the seed coat. The Plant cell, American Society of Plant Biologists (ASPB), 2002, 14, pp.2463-2479. ⟨hal-02682232⟩

Véronique Brunaud, Sandrine Balzergue, Bertrand B. Dubreucq, Sebastien Aubourg, Franck Samson, et al.. T-DNA integration into Arabidopsis genome depends on sequences of pre-insertion sites. EMBO Reports, EMBO Press, 2002, 3 (12), pp.1152-1157. ⟨10.1093/embo-reports/kvf237⟩. ⟨hal-02682810⟩

Franck Samson, Véronique Brunaud, Sandrine Balzergue, Bertrand B. Dubreucq, Loic L. Lepiniec, et al.. FLAGdb/FST: a database of mapped flanking insersion sites (FSTs) of Arabidopsis thaliana T-DNA transformants. Nucleic Acids Research, Oxford University Press, 2002, 30 (1), pp.94-97. ⟨hal-02678939⟩

K. Steinborn, C. Maulbetsch, B. Priester, S. Trautmann, T. Pacher, et al.. The Arabidopsis PILZ group genes encode tubulin-folding cofactors orthologues required for cell division but not cell growth. Genes and Development, Cold Spring Harbor Laboratory Press, 2002, 16, pp.959-971. ⟨10.1101/gad.221702⟩. ⟨hal-02681159⟩

Sebastien S. Baud, J.P. Boutin, Martine Miquel, Loic L. Lepiniec, Christine Rochat. An integrated overview of seed development in Arabidopsis thaliana ecotype WS. Plant Physiology and Biochemistry, Elsevier, 2002, 40, pp.151-160. ⟨hal-02681314⟩

Wen-Hui Shen, Yves Parmentier, Hanjo Hellmann, E. Lechner, Aiwu Dong, et al.. Null mutation of AtCUL1 causes arrest in early embryogenesis in Arabidopsis. Molecular Biology of the Cell, American Society for Cell Biology, 2002, 13 (6), pp.1916-1928. ⟨10.1091/mbc.E02-02-0077⟩. ⟨hal-02679589⟩

M.B. Sorensen, U. Mayer, W. Lukovitz, H. Robert, R. Chambrier, et al.. Cellularisation in the endosperm of Arabidopsis thaliana is coupled to mitosis and shares multiple components with cytokinesis. Development (Cambridge, England), Company of Biologists, 2002, 129, pp.5567-5576. ⟨10.1242/dev.00152⟩. ⟨hal-02683476⟩

Nathalie Nesi, C. Jond, Isabelle Debeaujon, Michel M. Caboche, Loic L. Lepiniec. The Arabidopsis TT2 gene encodes an R2R3 MYB domain protein that acts as a key determinant for proanthocyanidin accumulation in developing seed. The Plant cell, American Society of Plant Biologists (ASPB), 2001, 13, pp.2099-2114. ⟨hal-02678911⟩

M. Boisson, Veronique Gomord, Corinne Audran, Nathalie Berger, Bertrand B. Dubreucq, et al.. Arabidopsis glucosidase I mutants reveal a critical role of N-glycan trimming in seed development. EMBO Journal, EMBO Press, 2001, 20 (5), pp.1010-1019. ⟨hal-02683628⟩

Sandrine Balzergue, Bertrand B. Dubreucq, Sylvie Chauvin, I. Le-Clainche, F. Le Boulaire, et al.. Improved PCR-walking for large-scale isolation of plant T-DNA borders. Biotechniques, Eaton Publishing, 2001, 30 (3), 3 p. ⟨hal-02670631⟩

S.L. Stone, L.W. Kwong, Julien Pelletier, K.M. Yee, Loic L. Lepiniec, et al.. LEAFY COTYLEDON2 encodes a B3 domain transcription factor that induces embryo development. Proceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences, 2001, 98 (20), pp.11806-11811. ⟨10.1073/pnas.201413498⟩. ⟨hal-02682498⟩

Nathalie Nesi, Isabelle Debeaujon, C. Jond, G. Pelletier, Michel M. Caboche, et al.. The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques. The Plant cell, American Society of Plant Biologists (ASPB), 2000, 12, pp.1863-1878. ⟨hal-02691521⟩

Bertrand B. Dubreucq, Nathalie Berger, E. Vincent, M. Boisson, G. Pelletier, et al.. The Arabidopsis AtPRP1 extensin-like gene is specifically expressed in endosperm during seed germination. Plant Journal, Wiley, 2000, pp.643-652. ⟨hal-02688788⟩

J.M. Routaboul, C. Benning, Nicole Bechtold, Michel M. Caboche, Loic L. Lepiniec. The TAG1 locus of Arabidopsis encodes for a diacylglycerol acyltransferase. Plant Physiology and Biochemistry, Elsevier, 1999, 37 (11), pp.831-840. ⟨hal-02696132⟩

S.M.G. Duff, S.C. Andreo, V. Pacquit, Loic L. Lepiniec, G. Sarath, et al.. Kinetic analysis of the non-phosphorylated, in vitro phosphorylated, and phosphorylation-site-mutant (Asp8)forms of intact recombinant C4 phosphoenolpyruvate carboxylase from sorghum. European Journal of Biochemistry, Wiley, 1995, 228, pp.92-95. ⟨hal-02712803⟩

Loic L. Lepiniec, E. Babiychuk, S. Kushnir, Marc van Montagu, Dirk Inzé. Characterization of an Arabidopsis thaliana cDNA homologue to animal poly(ADP-ribose) polymerase. FEBS Letters, Wiley, 1995, 364, pp.103-108. ⟨hal-02708030⟩

Loic L. Lepiniec, L. Dalgarno, V.T.Q. Huong, P.T. Monath, J.P. Digoutte, et al.. Geographic distribution and evolution of yellow fever viruses based on direct sequencing of genomic cDNA fragments. Journal of General Virology, Microbiology Society, 1994, 75, pp.417-423. ⟨hal-02709204⟩

Loic L. Lepiniec, J. Vidal, R. Chollet, P. Gadal, C. Cretin. Phosphoenolpyruvate carboxylase : structure, regulation and evolution. Plant Science, Elsevier, 1994, 99, pp.111-124. ⟨hal-02709364⟩

M. Hodges, M. Miginiac-Maslow, P. Decottignies, J.P. Jacquot, M. Stein, et al.. Purification and characterization of pea thioredoxin f expressed in Escherichia coli. Plant Molecular Biology, Springer Verlag (Germany), 1994, 26, pp.225-234. ⟨hal-02707663⟩

Loic L. Lepiniec, E. Keryer, Denis Tagu, P. Gadal, C. Cretin. Complete nucleotide sequence of a sorghum gene coding for the phosphoenolpyruvate carboxylase involved in C4 photosynthesis. Plant Molecular Biology, Springer Verlag (Germany), 1992, pp.339-342. ⟨hal-02704851⟩

C. Cretin, S. Santi, E. Keryer, Loic L. Lepiniec, Denis Tagu, et al.. The phosphoenolpyruvate carboxylase gene family of Sorghum: promoter structures, amino acid sequences and expression of genes. Gene, Elsevier, 1991, 99, pp.87-94. ⟨hal-02706500⟩

C. Cretin, E. Keryer, Denis Tagu, Loic L. Lepiniec, G. Vidal, et al.. Complete cDNA sequence of sorghum phosphoenolpyruvase carboxylase involved in C4 photosynthesis. Nucleic Acids Research, Oxford University Press, 1990, 18 (3), 1 p. ⟨hal-02704669⟩

Estelle Chaix, Bertrand Dubreucq, Dialekti Valsamou, Abdelhak Fatihi, Louise Deleger, et al.. Shared Task SeeDev : Extraction de régulations impliquées dans le développement de la graine d’Arabidopsis thaliana à partir de publications scientifiques. Les journées Bioinformatique de l'Inra, Mar 2016, Montpellier, France. pp.1. ⟨hal-01455855⟩

Estelle Chaix, Bertrand Dubreucq, Abdelhak Fatihi, Dialekti Valsamou, Robert Bossy, et al.. Overview of the regulatory network of plant seed development (SeeDev) task at the BioNLP shared task 2016. BioNLP Shared Task, Aug 2016, Berlin, Germany. pp.113. ⟨hal-01455854⟩

Estelle Chaix, Bertrand Dubreucq, Dialekti Valsamou, Abdelhak Fatihi, Robert Bossy, et al.. Knowledge model of regulatory networks involved in Arabidopsis seed development for information extraction and integration from text. BioCreative 5, Sep 2015, Madrid, Spain. ⟨hal-01512197⟩

Bertrand Dubreucq, Dialekti Valsamou, Abdelhak Fatihi, Estelle Chaix, Robert Bossy, et al.. Information extraction from articles for the elaboration of the regulatory networks involved in Arabidopsis seed development. 26th International Conference on Arabidopsis Research, Jul 2015, Paris, France. ⟨hal-01524850⟩

Estelle Chaix, Bertrand Dubreucq, Dialekti Valsamou, Abdelhak Fatihi, Robert Bossy, et al.. Information extraction challenge Gene Regulation Network in Arabidopsis thaliana (GRNA). Paris-Saclay Center for Data Science: Open Software Initiative (OSI), Oct 2015, Orsay, France. pp.14 slides, ⟨10.13140/RG.2.1.4286.6326⟩. ⟨hal-01603453⟩

Loic L. Lepiniec, Sandrine Balzergue, Nicole Bechtold, M. Boisson, Bertrand B. Dubreucq, et al.. Isolation and characterization of Arabidopsis mutants affected in seed development or germination. 9. International conference on Arabidopsis research, Jun 1998, Madison, United States. ⟨hal-02765356⟩

Nathalie Nesi, C. Jond, Isabelle Debeaujon, Nicole Bechtold, M. Koornneef, et al.. Characterization of Arabidopsis thaliana T-DNA mutants affected in flavonoid biosynthetic pathway in the seed coat. 9. International conference on Arabidopsis research, Jun 1998, Madison, United States. ⟨hal-02767226⟩

Bertrand B. Dubreucq, C. Vroemen, Loic L. Lepiniec, S. de Vries, Michel M. Caboche, et al.. Enhancer and gene-trapping in Arabidopsis thaliana, as tool to identify molecular markers of seed germination. 5 p., 1999. ⟨hal-02841906⟩

Massimiliano Corso, François Perreau, Loïc Rajjou, Rawen Ben, Loic Lepiniec, et al.. Specialized metabolites in seeds. Plant Metabolomics, 98, Petriacq, P (Petriacq, P) ; Bouchereau, A (Bouchereau, A), 2021, Advances in Botanical Research, 978-0-12-821688-0. ⟨10.1016/bs.abr.2020.11.001⟩. ⟨hal-03738741⟩

Zsolt Kelemen, Jonathan Przybyla-Toscano, Nicolas Tissot, Loic Lepiniec, Christian Dubos. Fast and Efficient Cloning of Cis-Regulatory Sequences for High-Throughput Yeast One-Hybrid Analyses of Transcription Factors. Plant Synthetic Promoters: Methods in Molecular Biology, Springer Protocols, Humana Press, 2016, Methods in Molecular Biology, 978-1-4939-6394-2. ⟨10.1007/978-1-4939-6396-6_9⟩. ⟨hal-01403405⟩

Bertrand Dubreucq, Sebastien S. Baud, Isabelle Debeaujon, Christian Dubos, Annie Marion-Poll, et al.. Seed Development. Plant Developmental Biology - Biotechnological Perspectives, Springer-verlag, 497 p., 2010, 978-3-642-02300-2. ⟨10.1007/978-3-642-02301-9_17⟩. ⟨hal-01203968⟩

Isabelle Debeaujon, Loic Lepiniec, Lucille Pourcel, Jean-Marc Routaboul. Seed coat development and dormancy. Seed development, dormancy and germination, 27, Wiley-Blackwell, 392 p., 2007, Annual Plant Reviews, ⟨10.1093/aob/mcn167⟩. ⟨hal-01203973⟩

Estelle Chaix, Bertrand B. Dubreucq, Dialekti Valsamou, Abdelhak Fatihi, Louise Deleger, et al.. Annotation Guidelines BIONLP-ST 2016 SeeDev task. 2016, pp.47. ⟨hal-02795594⟩

Charlotte Miller, Rachel Wells, Neil Mckenzie, Martin Trick, Joshua Ball, et al.. Variation in expression of the HECT E3 ligase UPL3 modulates LEC2 levels, gene expression, seed size and crop yields in Brassica napus. 2018. ⟨hal-02790105⟩

Jacques Bittoun, Isabelle Bonnin, Jacques Capy, Gilles Chiocchia, Frédéric Dollé, et al.. Synthèse du livre blanc des sciences de la vie du département des sciences de la vie de l'université Paris Saclay. [0] 2015. ⟨hal-02800505⟩