Prediction of Disease-associated Genes by advanced Random Walk with Restart on Multiplex and Heterogeneous Biological Networks
Alberto Valdeolivas
,
Élisabeth Remy
,
Laurent Tichit
,
Gaëlle Odelin
,
Claire Navarro
,
et al.
JOBIM 2017 , Jul 2017, Lille, France
Communication dans un congrès
hal-03582849v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Designing optimal-and fast-on-average pattern matching algorithms
Gilles Didier
,
Laurent Tichit
Journal of Discrete Algorithms , 2017, 42, pp.45-60
Article dans une revue
hal-01310165v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Assessment of network module identification across complex diseases
Sarvenaz Choobdar
,
Mehmet Ahsen
,
Jake Crawford
,
Mattia Tomasoni
,
Tao Fang
,
et al.
Article dans une revue
hal-02333148v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
R{NA} secondary structure comparison: exact analysis of the {Z}hang-{S}hasha tree edit algorithm
Serge Dulucq
,
Laurent Tichit
Theoretical Computer Science , 2003, 306, pp.471--484
Article dans une revue
hal-00307518v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Inferring cell cycle phases from a partially temporal network of protein interactions
Maxime Lucas
,
Arthur Morris
,
Alex Townsend-Teague
,
Laurent Tichit
,
Bianca Habermann
,
et al.
Article dans une revue
hal-04144618v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
A Comprehensive Analysis of Gene Expression Changes Provoked by Bacterial and Fungal Infection in C. elegans
Ilka Engelmann
,
Aurelien Griffon
,
Laurent Tichit
,
Fr Montañana-Sanchis
,
Guilin Wang
,
et al.
Article dans une revue
hal-01261853v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Dispersion sémantique dans des familles morpho-phonologiques : éléments théoriques et empiriques
Núria Gala
,
Véronique Rey
,
Laurent Tichit
Traitement Automatique des Langues (TALN 2009) , Jun 2009, Senlis, France
Communication dans un congrès
hal-03198420v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
MultiVERSE: a multiplex and multiplex-heterogeneous network embedding approach
Léo Pio-Lopez
,
Alberto Valdeolivas
,
Laurent Tichit
,
Élisabeth Remy
,
Anaïs Baudot
Article dans une revue
hal-03359094v2
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Introducing the novel Cytoscape app TimeNexus to analyze time-series data using temporal MultiLayer Networks (tMLNs)
Michaël Pierrelée
,
Ana Reynders
,
Fabrice Lopez
,
Aziz Moqrich
,
Laurent Tichit
,
et al.
Article dans une revue
hal-03358832v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
About the largest subtree common to several phylogenetic trees
Laurent Tichit
,
Alain Guénoche
,
Henri Garreta
Applied Stochastic Models and Data Analysis ASMDA 2009: 13th International Conference, June 2009, Vilnius, Lithuania , Applied Stochastic Models and Data Analysis International Society (ASMDA), Jun 2009, Vilnius, Lithuania
Communication dans un congrès
hal-04145048v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
An integrated analysis tool reveals intrinsic biases in gene set enrichment
Nishant Thakur
,
Nathalie Pujol
,
Jacques van Helden
,
Robert H Waterston
,
Ladeana W. Hillier
,
et al.
2021
Pré-publication, Document de travail
hal-03374674v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Random walk with restart on multiplex and heterogeneous biological networks
Alberto Valdeolivas
,
Laurent Tichit
,
Claire L. Navarro
,
Sophie Perrin
,
Gaelle Odelin
,
et al.
Article dans une revue
hal-01946427v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Local Similarity Between Quotiented Ordered Trees
Pascal Ferraro
,
Aïda Ouangraoua
,
Laurent Tichit
,
Serge Dulucq
Journal of Discrete Algorithms , 2007, 5 (1), pp.23-35
Article dans une revue
hal-00307119v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Clone Mapper: An Online Suite of Tools for RNAi Experiments in Caenorhabditis elegans
Nishant Thakur
,
Nathalie Pujol
,
Laurent Tichit
,
Jonathan J. Ewbank
Article dans une revue
hal-01261841v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Analysis of a logical regulatory network reveals how Fe-S cluster biogenesis is controlled in the face of stress
Firas Hammami
,
Laurent Tichit
,
Béatrice Py
,
Frédéric Barras
,
Pierre Mandin
,
et al.
Article dans une revue
hal-04144637v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
About the largest subtree common to several X-trees
Alain Guénoche
,
Henri Garreta
,
Laurent Tichit
Mathématiques et Sciences Humaines , 2010, Mathématiques discrètes : théories et usages. Numéro en hommage à Bruno Leclerc, 190, pp.115-124.
⟨10.4000/msh.11751⟩
Article dans une revue
hal-04145727v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
An Integrative Database of β-Lactamase Enzymes: Sequences, Structures, Functions, and Phylogenetic Trees
Vivek Keshri
,
Seydina Diene
,
Adrien Estienne
,
Justine Dardaillon
,
Olivier Chabrol
,
et al.
Article dans une revue
hal-02159541v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
A quantitative genome-wide RNAi screen in C. elegans for antifungal innate immunity genes
Olivier Zugasti
,
Nishant Thakur
,
Jerome Belougne
,
Barbara Squiban
,
C. Léopold Kurz
,
et al.
Article dans une revue
hal-01438537v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Logical modelling of cellular decision processes with GINsim
Claudine Chaouiya
,
Aurélien Naldi
,
Lionel Spinelli
,
Pedro Monteiro
,
Duncan Berenguier
,
et al.
JOBIM 2012 , Jul 2012, Rennes, France
Communication dans un congrès
hal-01261855v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Dynamical modeling and analysis of large cellular regulatory networks
D Bérenguier
,
Claudine Chaouiya
,
Pedro T. Monteiro
,
A Naldi
,
Élisabeth Remy
,
et al.
Article dans une revue
hal-01261849v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
ICeE an interface for C. elegans experiments
Fr Montanana
,
Julien Renaud
,
Philippe Vaglio
,
Lisa Matthews
,
Laurent Tichit
,
et al.
Article dans une revue
hal-01261848v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
SimCT: a generic tool to visualize ontology-based relationships for biological objects.
Carl Herrmann
,
Sèverine Bérard
,
Laurent Tichit
Article dans une revue
halsde-00454253v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
ModClust: a Cytoscape plugin for modularity-based clustering of networks
Laurent Tichit
,
Philippe Gambette
,
Alain Guénoche
MARAMI 2011 , Oct 2011, Grenoble, France
Communication dans un congrès
hal-01261856v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Local Similarity Between Trees
Pascal Ferraro
,
Laurent Tichit
,
Serge Dulucq
Actes des 5ème Journées Ouvertes Biologie Informatique Mathématiques , Jun 2004, Montreal, Canada. pp.19
Communication dans un congrès
hal-00306628v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Population-based meta-heuristic for active modules identification
Leandro Corrêa
,
Denis Pallez
,
Laurent Tichit
,
Olivier Soriani
,
Claude Pasquier
10th International Conference on Computational Systems-Biology and Bioinformatics (CSBio 2019) , Dec 2019, Nice, France. pp.1-8,
⟨10.1145/3365953.3365957⟩
Communication dans un congrès
hal-02366236v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
A multi-objective genetic algorithm to find active modules in multiplex biological networks
Elva-María Novoa-Del-Toro
,
Efrén Mezura-Montes
,
Matthieu Vignes
,
Morgane Térézol
,
Frédérique Magdinier
,
et al.
Article dans une revue
hal-03372492v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
ClusterInspector: a tool to visualize ontology-based relationships between biological entities
Sèverine Bérard
,
Laurent Tichit
,
Carl Herrmann
Les Journées Ouvertes en Biologie, Informatique et Mathématiques Actes de {JOBIM}' 2005 , Jul 2005, Lyon, France
Communication dans un congrès
hal-04145768v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
A Multi-Objective Genetic Algorithm to Find Active Modules in Multiplex Biological Networks
Elva-María Novoa-Del-Toro
,
Efrén Mezura-Montes
,
Matthieu Vignes
,
Frédérique Magdinier
,
Laurent Tichit
,
et al.
2020
Pré-publication, Document de travail
hal-02997031v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Clone Mapper: An Online Suite of Tools for RNAi Experiments in Caenorhabditis elegans
Nishant Thakur
,
Nathalie Pujol
,
Laurent Tichit
,
Jonathan J. Ewbank
Article dans une revue
hal-01243281v1
Actions
Partager
Gmail
Facebook
X
LinkedIn
More
Clust&See: A Cytoscape plugin for the identification, visualization and manipulation of network clusters
Lionel Spinelli
,
Philippe Gambette
,
Charles E. Chapple
,
Benoît Robisson
,
Anaïs Baudot
,
et al.
Article dans une revue
hal-00832028v2
Actions
Partager
Gmail
Facebook
X
LinkedIn
More