Recherche - Archive ouverte HAL Accéder directement au contenu

Filtrer vos résultats

34 résultats
Page :
triés par
Image document

Convolutional Kernel Networks for Graph-Structured Data

 Dexiong Chen , Laurent Jacob , Julien Mairal
ICML 2020 - 37th International Conference on Machine Learning, Jul 2020, Vienna, Austria. pp.1576-1586
Communication dans un congrès hal-02504965v2
Image document

The healthy ageing gene expression signature for Alzheimer’s disease diagnosis: a random sampling perspective

 Laurent Jacob , Terence Paul Speed
Genome Biology, 2018, 19 (1), ⟨10.1186/s13059-018-1481-6⟩
Article dans une revue hal-02388728v1
Image document

CALDERA: Finding all significant de Bruijn subgraphs for bacterial GWAS

 Hector Roux de Bézieux , Leandro Lima , Fanny Perraudeau , Arnaud Mary , Sandrine Dudoit , et al.
Bioinformatics, 2022, ⟨10.1093/bioinformatics/btac238⟩
Article dans une revue hal-03433563v1

Combining calls from multiple somatic mutation-callers

 S. Y. Kim , Laurent Jacob , T. P. Speed
BMC Bioinformatics, 2014, 15, pp.154. ⟨10.1186/1471-2105-15-154⟩
Article dans une revue hal-02046830v1
Image document

Increasing stability and interpretability of gene expression signatures

 Anne-Claire Haury , Laurent Jacob , Jean-Philippe Vert
2010
Pré-publication, Document de travail hal-00448395v1

Efficient peptide-MHC-I binding prediction for alleles with few known binders.

 Laurent Jacob , Jean-Philippe Vert
Bioinformatics, 2008, 24 (3), pp.358-66. ⟨10.1093/bioinformatics/btm611⟩
Article dans une revue hal-00433574v1
Image document

Biological Sequence Modeling with Convolutional Kernel Networks

 Dexiong Chen , Laurent Jacob , Julien Mairal
Bioinformatics, 2019, 35 (18), pp.3294-3302. ⟨10.1093/bioinformatics/btz094⟩
Article dans une revue hal-01632912v3
Image document

Phyloformer: towards fast and accurate phylogeny estimation with self-attention networks

 Luca Nesterenko , Bastien Boussau , Laurent Jacob
2022
Pré-publication, Document de travail hal-03756990v1
Image document

Virtual screening of GPCRs: An in silico chemogenomics approach

 Laurent Jacob , Brice Hoffmann , Véronique Stoven , Jean-Philippe Vert
BMC Bioinformatics, 2008, 9, pp.363. ⟨10.1186/1471-2105-9-363⟩
Article dans une revue hal-00220396v2

Statistical methods for handling unwanted variation in metabolomics data

 Alysha M. de Liyera , Marko Sysi Aho , Laurent Jacob , Johann A. Gagnon Bartsch , Sandra Castillo , et al.
Analytical Chemistry, 2015, 87 (7), pp.3606-3615. ⟨10.1021/ac502439y⟩
Article dans une revue hal-02639505v1

Correcting gene expression data when neither the unwanted variation nor the factor of interest are observed

 Laurent Jacob , J. A. Gagnon-Bartsch , T. P. Speed
Biostatistics, 2016, 17, pp.16-28. ⟨10.1093/biostatistics/kxv026⟩
Article dans une revue hal-02012377v1

Protein-ligand interaction prediction: an improved chemogenomics approach.

 Laurent Jacob , Jean-Philippe Vert
Bioinformatics, 2008, 24 (19), pp.2149-56. ⟨10.1093/bioinformatics/btn409⟩
Article dans une revue hal-00433572v1
Image document

Efficient RNA Isoform Identification and Quantification from RNA-Seq Data with Network Flows

 Elsa Bernard , Laurent Jacob , Julien Mairal , Jean-Philippe Vert
Bioinformatics, 2014, 30 (17), pp.2447-2455. ⟨10.1093/bioinformatics/btu317⟩
Article dans une revue hal-00803134v3
Image document

Clustered Multi-Task Learning: A Convex Formulation

 Laurent Jacob , Francis Bach , Jean-Philippe Vert
2008
Pré-publication, Document de travail hal-00320573v1

Machine learning for in silico virtual screening and chemical genomics: new strategies.

 Jean-Philippe Vert , Laurent Jacob
Combinatorial Chemistry and High Throughput Screening, 2008, 11 (8), pp.677-85
Article dans une revue hal-00433569v1
Image document

A convex formulation for joint RNA isoform detection and quantification from multiple RNA-seq samples

 Elsa Bernard , Laurent Jacob , Julien Mairal , Eric Viara , Jean-Philippe Vert
BMC Bioinformatics, 2015, 16 (1), pp.262:1-10. ⟨10.1186/s12859-015-0695-9⟩
Article dans une revue hal-01123141v3

The cost of growing large: costs of post-weaning growth on body mass senescence in a wild mammal

 Frédéric Douhard , J.M. Gaillard , M. Pellerin , Laurent Jacob , Jean-François Lemaître
Oikos, 2017, 126 (9), pp.1329-1338. ⟨10.1111/oik.04421⟩
Article dans une revue hal-02049674v1
Image document

Controlling technical variation amongst 6693 patient microarrays of the randomized MINDACT trial

 Laurent Jacob , Anke Witteveen , Inès Beumer , Leonie Delahaye , Diederik Wehkamp , et al.
Communications Biology, 2020, 3, ⟨10.1038/s42003-020-1111-1⟩
Article dans une revue hal-02990043v1

Hormonal pleiotropy and the evolution of allocation trade‐offs

 Salomé Bourg , Laurent Jacob , Frédéric Menu , Etienne Rajon
Evolution - International Journal of Organic Evolution, 2019, 73 (4), pp.661-674. ⟨10.1111/evo.13693⟩
Article dans une revue hal-02307231v1
Image document

Recurrent Kernel Networks

 Dexiong Chen , Laurent Jacob , Julien Mairal
NeurIPS 2019 - Thirty-third Conference on Neural Information Processing Systems, Dec 2019, Vancouver, Canada
Communication dans un congrès hal-02151135v2
Image document

Biological Sequence Modeling with Convolutional Kernel Networks

 Dexiong Chen , Laurent Jacob , Julien Mairal
RECOMB 2019 - 23rd Annual International Conference Research in Computational Molecular Biology, May 2019, Washington DC, United States. pp.292-293, ⟨10.1007/978-3-030-17083-7⟩
Communication dans un congrès hal-02388776v1
Image document

Epitope prediction improved by multitask support vector machines

 Laurent Jacob , Jean-Philippe Vert
2007
Autre publication scientifique hal-00129062v1

Within-host genetic micro-diversity of Mycobacterium tuberculosis and the link with tuberculosis disease features

 Charlotte Genestet , Elisabeth Hodille , François Massol , Guislaine Refrégier , Alexia Barbry , et al.
2021
Pré-publication, Document de travail hal-03433572v1
Image document

Immunosenescence patterns differ between populations but not between sexes in a long-lived mammal

 Louise Cheynel , Jean-François Lemaître , Jean-Michel Gaillard , Benjamin Rey , G. Bourgoin , et al.
Scientific Reports, 2017, 7 (1), ⟨10.1038/s41598-017-13686-5⟩
Article dans une revue hal-03225790v1

PEPA test: fast and powerful differential analysis from relative quantitative proteomics data using shared peptides

 Laurent Jacob , Florence Combes , Thomas Burger
Biostatistics, 2018, ⟨10.1093/biostatistics/kxy021⟩
Article dans une revue hal-02191248v1
Image document

Neural Networks beyond explainability: Selective inference for sequence motifs

 Antoine Villié , Philippe Veber , Yohann de Castro , Laurent Jacob
Transactions on Machine Learning Research Journal, 2023, ⟨10.48550/arXiv.2212.12542⟩
Article dans une revue hal-03895446v1
Image document

Structured priors for supervised learning in computational biology

 Laurent Jacob
Life Sciences [q-bio]. École Nationale Supérieure des Mines de Paris, 2009. English. ⟨NNT : 2009ENMP1644⟩
Thèse pastel-00005743v1
Image document

Kernel methods for in silico chemogenomics

 Laurent Jacob , Jean-Philippe Vert
2007
Pré-publication, Document de travail hal-00174808v1
Image document

Group Lasso with Overlaps: the Latent Group Lasso approach

 Guillaume Obozinski , Laurent Jacob , Jean-Philippe Vert
[Research Report] 2011, pp.60
Rapport inria-00628498v1
Image document

Niche specialization and spread of Staphylococcus capitis involved in neonatal sepsis

 Thierry Wirth , Marine Bergot , Jean-Philippe Rasigade , Bruno Pichon , Maxime Barbier , et al.
Nature Microbiology, 2020, 5 (5), pp.735-745. ⟨10.1038/s41564-020-0676-2⟩
Article dans une revue hal-03056509v1
Page :