Recherche - Archive ouverte HAL Accéder directement au contenu

Filtrer vos résultats

12 résultats
Page :
triés par
Image document

Masked superstrings as a unified framework for textual k-mer set representations

 Ondřej Sladký , Pavel Veselý , Karel Břinda
2023
Pré-publication, Document de travail hal-03970624v1
Image document

Blind Friendly Maps

 Petr Červenka , Karel Brinda , Radek Seifert , Petr Hofman
International Conference on Sensory issues and Disability: Touch to learn, touch to communicate, Mar 2016, Paris, France. 2016
Poster de conférence hal-01289174v1
Image document

Efficient and Robust Search of Microbial Genomes via Phylogenetic Compression

 Karel Břinda , Leandro Lima , Simone Pignotti , Natalia Quinones-Olvera , Kamil Salikhov , et al.
2023
Pré-publication, Document de travail hal-04287842v1
Image document

Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing

 Karel Brinda , Alanna Callendrello , Kevin C Ma , Derek R Macfadden , Robyn Lee , et al.
Nature Microbiology, 2020, ⟨10.1038/s41564-019-0656-6⟩
Article dans une revue hal-02416034v1
Image document

Novel computational techniques for mapping and classification of Next-Generation Sequencing data

 Karel Brinda
Information Theory [cs.IT]. Université Paris-Est, 2016. English. ⟨NNT : 2016PESC1027⟩
Thèse tel-01484198v3
Image document

Languages of lossless seeds

 Karel Brinda
Proceedings of the 14th International Conference on Automata and Formal Languages (AFL), May 2014, Szeged, Hungary. pp.139-150, ⟨10.4204/eptcs.151.9⟩
Communication dans un congrès hal-01018062v1
Image document

Rapid heuristic inference of antibiotic resistance and susceptibility by genomic neighbor typing

 Karel Brinda , Alanna Callendrello , Kevin C Ma , Derek R Macfadden , Themoula Charalampous , et al.
2019
Pré-publication, Document de travail hal-02414869v1
Image document

Dynamic read mapping and online consensus calling for better variant detection

 Karel Brinda , Valentina Boeva , Gregory Kucherov
2016
Pré-publication, Document de travail hal-01323188v1
Image document

Blind Friendly Maps: Tactile Maps for the Blind as a Part of the Public Map Portal (Mapy.cz)

 Petr Červenka , Karel Brinda , Michaela Hanousková , Petr Hofman , Radek Seifert
ICCHP 2016: 15th International Conference on Computers Helping People with Special Needs, Jul 2016, Linz, Austria
Communication dans un congrès hal-01295585v1
Image document

Simplitigs as an efficient and scalable representation of de Bruijn graphs

 Karel Brinda , Michael Baym , Gregory Kucherov
Genome Biology, 2021, 22 (96), ⟨10.1101/2020.01.12.903443⟩
Article dans une revue hal-03049400v1

Spaced seeds improve k-mer-based metagenomic classification

 Karel Brinda , Maciej Sykulski , Gregory Kucherov
Bioinformatics, 2015, ⟨10.1093/bioinformatics/btv419⟩
Article dans une revue hal-01250752v1
Image document

RNF: a general framework to evaluate NGS read mappers

 Karel Brinda , Valentina Boeva , Gregory Kucherov
Bioinformatics, 2016, 32 (1), pp.136-139. ⟨10.1093/bioinformatics/btv524⟩
Article dans une revue hal-01220199v2
Page :