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Accelerating metabolic models evaluation with statistical metamodels: application to Salmonella infection models

 Clémence Frioux , Sylvie Huet , Simon Labarthe , Julien Martinelli , Thibault Malou , et al.
ESAIM: Proceedings and Surveys, 73, pp.187-217, 2023, CEMRACS 2021 - Data Assimilation and Reduced Modeling for High Dimensional Problems, ⟨10.1051/proc/202373187⟩
Proceedings/Recueil des communications hal-03635862v2
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Reactmine: a statistical search algorithm for inferring chemical reactions from time series data

 Julien Martinelli , Jeremy Grignard , Sylvain Soliman , Annabelle Ballesta , François Fages
2023
Pré-publication, Document de travail hal-03769872v2
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A Statistical Unsupervised Learning Algorithm for Inferring Reaction Networks from Time Series Data

 Julien Martinelli , Jeremy Grignard , Sylvain Soliman , François Fages
ICML 2019 - Workshop on Computational Biology, Jun 2019, Long Beach, CA, United States
Communication dans un congrès hal-02163862v1
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Dynamic Flux Balance Analysis with Metamodels

 Clémence Frioux , Sylvie Huet , Simon Labarthe , Julien Martinelli , Thibault Malou , et al.
Microbial communities: current approaches and open challenges, Oct 2022, Cambridge, United Kingdom.
Poster de conférence hal-04252041v1
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On Inferring Reactions from Data Time Series by a Statistical Learning Greedy Heuristics

 Julien Martinelli , Jeremy Grignard , Sylvain Soliman , François Fages
CMSB 2019 - 17th Computational Methods in Systems Biology, Sep 2019, Trieste, Italy
Communication dans un congrès hal-02173721v1
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Model learning to identify systemic regulators of the peripheral circadian clock

 Julien Martinelli , Sandrine Dulong , Xiao-Mei Li , Michèle Teboul , Sylvain Soliman , et al.
Bioinformatics, 2021, 37 (Supplement_1), pp.9. ⟨10.1093/bioinformatics/btab297⟩
Article dans une revue hal-03183579v1
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On learning mechanistic models from time series data with applications to personalised chronotherapies

 Julien Martinelli
Machine Learning [stat.ML]. Institut Polytechnique de Paris, 2022. English. ⟨NNT : 2022IPPAX011⟩
Thèse tel-03686289v1
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Dynamic Flux Balance Analysis with Metamodels

 Clémence Frioux , Sylvie Huet , Simon Labarthe , Julien Martinelli , Thibault Malou , et al.
JOBIM 2022 - Les Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2022, Rennes, France.
Poster de conférence hal-04236775v1
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