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Variability of the hemocyte parameters of Ruditapes philippinarum in the field during an annual cycle

Jonathan Flye-Sainte-Marie , Philippe Soudant , Christophe Lambert , Nelly Le Goïc , Madeleine Goncalvez , et al.
Journal of Experimental Marine Biology and Ecology, 2009, 377 (1), pp.1-11. ⟨10.1016/j.jembe.2009.06.003⟩
Article dans une revue hal-00452255v1
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Modeling the impact of hypoxia on the energy budget of Atlantic cod in two populations of the Gulf of Saint-Lawrence, Canada

Romain Lavaud , Yoann Thomas , Laure Pecquerie , Hugues P. Benoît , Thomas Guyondet , et al.
Journal of Sea Research (JSR), 2019, 143, pp.243-253. ⟨10.1016/j.seares.2018.07.001⟩
Article dans une revue hal-02530668v1
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DEBSe@: an e-learning platform to introduce the Dynamic Energy Budget (DEB) theory for marine ecology, fisheries sciences and aquaculture applications

Yoann Thomas , Fred Jean , Laure Pecquerie , Gonçalo Marques , Sébastien Hervé , et al.
International Society for Ecological Modelling - Global Conference 2016, May 2016, Baltimore, United States. 2016, ⟨10.13140/RG.2.2.32880.25602⟩
Poster de conférence hal-01395769v1

Reconstructing the growth and feeding of the scallop Mimachlamys varia: a DEB application

Laure Régnier-Brisson , Eline Le Moan , Thomas Guyondet , Laure Pecquerie , Philippe Cugier , et al.
8th International Symposium on Dynamic Energy Budget Theory for Metabolic Organization, Jun 2023, Baton-Rouge, United States
Communication dans un congrès hal-04179984v1

Parameter estimation for the variegated scallop, Mimachlamys varia, an exploited bivalve, for a better understanding of its life cycle

Laure Régnier-Brisson , Eline Le Moan , Jonathan Flye-Sainte-Marie , Philippe Cugier , Aline Blanchet-Aurigny , et al.
8th International Symposium on Dynamic Energy Budget Theory for Metabolic Organization, Jun 2023, Baton-Rouge, United States
Poster de conférence hal-04179986v1
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Predicting the energy budget of the scallop Argopecten purpuratus in an oxygen–limiting environment

Arturo Aguirre-Velarde , Laure Pecquerie , Fred Jean , Gérard Thouzeau , Jonathan Flye-Sainte-Marie
Journal of Sea Research (JSR), 2019, 143, pp.254-261. ⟨10.1016/j.seares.2018.09.011⟩
Article dans une revue hal-02114544v1
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Reproduction patterns of the bloody cockle Senilia senilis (Linnaeus 1758) in the Sine-Saloum inverse estuary

Babacar Sané , Malick Diouf , Frédéric Jean , Jonathan Flye-Sainte-Marie , Malika Kerhervé , et al.
Aquatic Living Resources, 2023, 36, pp.33. ⟨10.1051/alr/2023029⟩
Article dans une revue hal-04372964v1

Primary production and spatial distribution of subtidal microphytobenthos in a temperate coastal system, the Bay of Brest, France.

Sorcha Ni Longphuirt , Aude Leynaert , Jacques Grall , Jacques Clavier , François Le Loc’h , et al.
Estuarine, Coastal and Shelf Science, 2007, vol. 74 (n° 3), p. 367-380
Article dans une revue hal-00192124v1
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Effects of hypoxia on metabolic functions in marine organisms: Observed patterns and modelling assumptions within the context of Dynamic Energy Budget (DEB) theory

Yoann Thomas , Jonathan Flye-Sainte-Marie , Denis Chabot , Arturo Aguirre-Velarde , Gonçalo Marques , et al.
Journal of Sea Research (JSR), 2019, 143, pp.231-242. ⟨10.1016/j.seares.2018.05.001⟩
Article dans une revue hal-02530659v1

Energy metabolism of juvenile scallops Nodipecten subnodosus under acute increased temperature and low oxygen availability

Rosa L Salgado-García , Edouard Kraffe , Miguel A Tripp-Valdez , Jose L Ramírez-Arce , Sebastien Artigaud , et al.
Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 2023, 278, ⟨10.1016/j.cbpa.2023.111373⟩
Article dans une revue hal-04132384v1
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Modelling paralytic shellfish toxins (PST) accumulation in Crassostrea gigas by using Dynamic Energy Budgets (DEB)

Emilien Pousse , Jonathan Flye-Sainte-Marie , Marianne Alunno-Bruscia , Helene Hegaret , Eric Rannou , et al.
Journal of Sea Research (JSR), 2019, 143, pp.152-164. ⟨10.1016/j.seares.2018.09.002⟩
Article dans une revue hal-02114653v1
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What can the shell tell about the scallop? Using growth trajectories along latitudinal and bathymetric gradients to reconstruct physiological history with DEB theory

Romain Lavaud , Aurelie Jolivet , Eric Rannou , Fred Jean , Oivind Strand , et al.
Journal of Sea Research (JSR), 2019, 143, pp.193-206. ⟨10.1016/j.seares.2018.04.001⟩
Article dans une revue hal-02871386v1

Predicting the energy budget of the scallop Argopecten purpuratus in an oxygen–limiting environment

A Aguirre Velarde , Laure Pecquerie , F Jean , G Thouzeau , J. Flye-Sainte-Marie
Predicting the energy budget of the scallop Argopecten purpuratus in an oxygen–limiting environment, Apr 2019, Brest, France
Communication dans un congrès hal-04180094v1
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Physiological and comparative proteomic analyzes reveal immune defense response of the king scallop Pecten maximus in presence of paralytic shellfish toxin (PST) from Alexandrium minutum

Yasmine Even , Emilien Pousse , Coraline Chapperon , Sébastien Artigaud , Hélène Hégaret , et al.
Harmful Algae, 2022, 115, pp.102231. ⟨10.1016/j.hal.2022.102231⟩
Article dans une revue hal-03723474v1
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Ecophysiological dynamic model of individual growth of Ruditapes philippinarum

Jonathan Flye-Sainte-Marie , Fred Jean , Christine Paillard , Susan Ford , Eric Powell , et al.
Aquaculture, 2007, 266 (1-4), pp.130-143. ⟨10.1016/j.aquaculture.2007.02.017⟩
Article dans une revue hal-00452257v1

Effect of hypoxia on cod bioenergetics

R Lavaud , Y Thomas , L Pecquerie , H Benoît , T Guyondet , et al.
6th International Symposium on DEB theory for metabolic organisation, Apr 2019, Brest, France
Communication dans un congrès hal-04179287v1
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Impact of Brown Ring Disease on the energy budget of the Manila clam Ruditapes philippinarum

Jonathan Flye-Sainte-Marie , Stéphane Pouvreau , Christine Paillard , Fred Jean
Journal of Experimental Marine Biology and Ecology, 2007, 349 (2), pp.378-389. ⟨10.1016/j.jembe.2007.05.029⟩
Article dans une revue hal-00452254v1

Biodiversité, évolution et fonctionnement des écosystèmes

Isabelle Arzul , Salvador Bailon , David Bass , Pierre Boudry , Philippe Béarez , et al.
Crochet P.-A.; Rasplus J.-Y.; Selosse M.-A. Les Cahiers des prospectives, hors série, cnrs, pp.25-33., 2017, Les Cahiers des prospectives
Chapitre d'ouvrage halshs-03847162v1
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Sclerochronological records and daily microgrowth of the Peruvian scallop (Argopecten purpuratus, Lamarck, 1819) related to environmental conditions in Paracas Bay, Pisco, Peru

Arturo Aguirre-Velarde , Jonathan Flye-Sainte-Marie , Jaime Mendo , Fred Jean
Journal of Sea Research (JSR), 2015, 99, pp.1-8. ⟨10.1016/j.seares.2015.01.002⟩
Article dans une revue hal-01145400v1
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Chronic and severe hypoxic conditions in Paracas Bay, Pisco, Peru: Consequences on scallop growth, reproduction, and survival

Arturo Aguirre-Velarde , Gérard Thouzeau , Fred Jean , Jaime Mendo , Rosa Cueto-Vega , et al.
Aquaculture, 2019, 512, pp.734259. ⟨10.1016/j.aquaculture.2019.734259⟩
Article dans une revue hal-02405983v1
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Coupling experimental and field-based approaches to decipher carbon sources in the shell of the great scallop, Pecten maximus (L.)

V Marchais , J Richard , A Jolivet , Jonathan Flye-Sainte-Marie , Julien Thébault , et al.
Geochimica et Cosmochimica Acta, 2015, 168, pp.58-69. ⟨10.1016/j.gca.2015.07.010⟩
Article dans une revue hal-01211666v1
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Effect of sediment grain-size on development of brown ring disease in the Manila clam Ruditapes philippinarum

Jonathan Flye-Sainte-Marie , Fred Jean , Susan Ford , Christine Paillard
Aquaculture, 2008, 278 (1-4), pp.184-187. ⟨10.1016/j.aquaculture.2008.03.013⟩
Article dans une revue hal-00452260v1

Comparing two pectinid species as a fast and a slow depurators of amnesic shellfish toxin through a modelling approach

Eline Le Moan , Laure Régnier-Brisson , Laure Pecquerie , Caroline Fabioux , Fred Jean , et al.
Conférence annuelle GdR Phycotox - GIS Cyanobactéries 2023, May 2023, Nantes, France
Communication dans un congrès hal-04180049v1

Fast and slow depurators of amnesic shellfish toxin: a bioenergetic modelling approach to compare two pectinid species

Eline Le Moan , Laure Régnier-Brisson , Laure Pecquerie , Caroline Fabioux , Fred Jean , et al.
8th International symposium on Dynamic Energy Budget Theory for Metabolic Organization, Jun 2023, Bâton-Rouge, LA, United States
Poster de conférence hal-04179840v1

Trade-off between growth and reproduction in Argopecten purpuratus (L.) scallops exposed to medium-term hypoxia and acidification

Rosa Cueto-Vega , Jonathan Flye-Sainte-Marie , José Luis García-Corona , Fernando Palacios , Fred Jean , et al.
Aquaculture, 2024, 586, pp.740713. ⟨10.1016/j.aquaculture.2024.740713⟩
Article dans une revue hal-04559441v1
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Towards the Determination of Mytilus edulis Food Preferences Using the Dynamic Energy Budget (DEB) Theory.

Coralie Picoche , Romain Le Gendre , Jonathan Flye-Sainte-Marie , Sylvaine Françoise , Frank Maheux , et al.
PLoS ONE, 2014, 9 (10), pp.e109796. ⟨10.1371/journal.pone.0109796⟩
Article dans une revue hal-01089326v1
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Feeding and energetics of the great scallop, Pecten maximus, through a DEB model

Romain Lavaud , Jonathan Flye-Sainte-Marie , Fred Jean , Antoine Emmery , Oivind Strand , et al.
Journal of Sea Research (JSR), 2014, 94, pp.5 - 18. ⟨10.1016/j.seares.2013.10.011⟩
Article dans une revue hal-00917710v1
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Sources of paralytic shellfish toxin accumulation variability in the Pacific oyster Crassostrea gigas

Emilien Pousse , Jonathan Flye-Sainte-Marie , Marianne Alunno-Bruscia , Helene Hegaret , Frédéric Jean
Toxicon, 2018, 144, pp.14-22. ⟨10.1016/j.toxicon.2017.12.050⟩
Article dans une revue hal-02324600v1

Deep sequencing of the mantle transcriptome of the great scallop Pecten maximus.

Sébastien Artigaud , Michael a S Thorne , Joëlle Richard , Romain Lavaud , Fred Jean , et al.
Marine Genomics, 2014, 15, pp.3-4. ⟨10.1016/j.margen.2014.03.006⟩
Article dans une revue hal-01022918v1

An environmentally induced tidal periodicity of microgrowth increment formation in subtidal populations of the clam Ruditapes philippinarum

Céline Poulain , Anne Lorrain , Jonathan Flye-Sainte-Marie , Erwan Amice , Eric Morize , et al.
Journal of Experimental Marine Biology and Ecology, 2011, 397 (1), pp.58-64. ⟨10.1016/j.jembe.2010.11.001⟩
Article dans une revue istex hal-00669639v1