Johan Montagnat

Malcolm Atkinson, Sandra Gesing, Johan Montagnat, Ian Taylor. Scientific workflows: Past, present and future. Future Generation Computer Systems, Elsevier, 2017, 75, pp.216 - 227. ⟨10.1016/j.future.2017.05.041⟩. ⟨hal-01544818⟩

Alban Gaignard, Johan Montagnat, Bernard Gibaud, Germain Forestier, Tristan Glatard. Domain-specific summarisation of Life-Science e-experiments from provenance traces. Journal of Web Semantics, Elsevier, 2014, 29, pp.19-30. ⟨10.1016/j.websem.2014.07.001⟩. ⟨hal-01027596⟩

Bernard Gibaud, Germain Forestier, Hugues Benoit-Cattin, Frédéric Cervenansky, Patrick Clarysse, et al.. OntoVIP: An ontology for the annotation of object models used for medical image simulation.. Journal of Biomedical Informatics, Elsevier, 2014, 52, pp.279-92. ⟨10.1016/j.jbi.2014.07.008⟩. ⟨inserm-01062371⟩

Tristan Glatard, Carole Lartizien, Bernard Gibaud, Rafael Ferreira da Silva, Germain Forestier, et al.. A virtual imaging platform for multi-modality medical image simulation.. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2013, 32 (1), pp.110-8. ⟨10.1109/TMI.2012.2220154⟩. ⟨inserm-00762497⟩

David Rogers, Ian Harvey, Tram Truong Huu, Kieran Evans, Tristan Glatard, et al.. Bundle and Pool Architecture for Multi-Language, Robust, Scalable Workflow Executions. Journal of Grid Computing, Springer Verlag, 2013, 11 (3), pp.457-480. ⟨10.1007/s10723-013-9267-2⟩. ⟨hal-00832221⟩

Kassian Plankensteiner, Radu Prodan, Matthias Janetschek, Thomas Fahringer, Johan Montagnat, et al.. Fine-Grain Interoperability of Scientific Workflows in Distributed Computing Infrastructures. Journal of Grid Computing, Springer Verlag, 2013, 11 (3), pp.429-456. ⟨10.1007/s10723-013-9261-8⟩. ⟨hal-00832214⟩

Nadia Cerezo, Johan Montagnat, Mireille Blay-Fornarino. Computer-Assisted Scientific Workflow Design. Journal of Grid Computing, Springer Verlag, 2013, 11 (3), pp.585-610. ⟨10.1007/s10723-013-9264-5⟩. ⟨hal-00833692⟩

Annie Authosserre-Cavarero, Frédéric Bertrand, Mireille Fornarino, Philippe Collet, Hubert Dubois, et al.. Ingénierie dirigée par les modèles : quels supports à l'interopérabilité des systèmes d'information ?. Revue des Sciences et Technologies de l'Information - Série ISI : Ingénierie des Systèmes d'Information, Lavoisier, 2013. ⟨hal-00813675v2⟩

Mathieu Acher, Philippe Collet, Alban Gaignard, Philippe Lahire, Johan Montagnat, et al.. Composing Multiple Variability Artifacts to Assemble Coherent Workflows. Software Quality Journal, Springer Verlag, 2012, 20 (3-4), pp.689-734. ⟨10.1007/s11219-011-9170-7⟩. ⟨hal-00733556⟩

Clémentine Nemo, Mireille Blay-Fornarino, Johan Montagnat, Michel Riveill. Réparation de modèles par transformations indempotentes. Revues des Sciences et Technologies de l'Information, 2011, 16 (5), pp.73-108. ⟨hal-00683448⟩

Tram Truong Huu, Guilherme Koslovski, Fabienne Anhalt, Johan Montagnat, Pascale Vicat-Blanc Primet. Joint Elastic Cloud and Virtual Network Framework for Application Performance-cost Optimization. Journal of Grid Computing, Springer Verlag, 2011, 9 (1), pp.27-47. ⟨10.1007/s10723-010-9168-6⟩. ⟨hal-00677784⟩

Diane Lingrand, Johan Montagnat, Janusz Martyniak, David Colling. Optimization of jobs submission on the EGEE production grid: modeling faults using workload. Journal of Grid Computing, Springer Verlag, 2010, 8 (2), pp.305-321. ⟨10.1007/s10723-010-9151-2⟩. ⟨hal-00677775⟩

Diane Lingrand, Tristan Glatard, Johan Montagnat. Modeling the latency on production grids with respect to the execution context. Parallel Computing, Elsevier, 2009, 35 (10-11), pp.493--511. ⟨10.1016/j.parco.2009.07.003⟩. ⟨hal-00459261⟩

Johan Montagnat, Akos Frohner, Daniel Jouvenot, Christophe Pera, Peter Kunszt, et al.. A Secure Grid Medical Data Manager Interfaced to the gLite Middleware. Journal of Grid Computing, Springer Verlag, 2008, 6 (1), pp.45-59. ⟨10.1007/s10723-007-9088-2⟩. ⟨hal-00683989⟩

Tristan Glatard, Johan Montagnat, David Emsellem, Diane Lingrand. A Service-Oriented Architecture enabling dynamic services grouping for optimizing distributed workflows execution. Future Generation Computer Systems, Elsevier, 2008, 24 (7), pp.720--730. ⟨10.1016/j.future.2008.02.011⟩. ⟨hal-00459808⟩

Tristan Glatard, Johan Montagnat, Diane Lingrand, Xavier Pennec. Flexible and efficient workflow deployement of data-intensive applications on grids with MOTEUR. International Journal of High Performance Computing Applications, SAGE Publications, 2008, 22 (3), pp.347-360. ⟨10.1177/1094342008096067⟩. ⟨hal-00459130⟩

N. Jacq, J. Salzemann, F. Jacq, Yannick Legre, E. Medernach, et al.. Grid enabled virtual screening against malaria. Journal of Grid Computing, Springer Verlag, 2008, 6, pp.29-43. ⟨in2p3-00114120⟩

Johan Montagnat, Tristan Glatard, Isabel Campos Plasencia, Francisco Castejon, Xavier Pennec, et al.. Workflow-based data parallel applications on the EGEE production grid infrastructure. Journal of Grid Computing, Springer Verlag, 2008, 6 (8), pp.369-383. ⟨10.1007/s10723-008-9108-x⟩. ⟨hal-00683983⟩

Leonardo Flórez-Valencia, Johan Montagnat, Maciej Orkisz. 3D models for vascular lumen segmentation in MRA images and for artery-stenting simulation. Ingénierie et Recherche Biomédicale (ITBM-RBM), 2007, 28 (2), pp.65-71. ⟨10.1016/j.rbmret.2007.04.001⟩. ⟨hal-00683451⟩

Johan Montagnat, Hervé Delingette. 4D deformable models with temporal constraints: application to 4D cardiac image segmentation. Medical Image Analysis, Elsevier, 2005, 9 (1), pp.87-100. ⟨10.1016/j.media.2004.06.025⟩. ⟨hal-00682924⟩

Vincent Breton, Kevin Dean, Tony Solomonides, Ignacio Blanquer, V. Hernandez, et al.. The Healthgrid White Paper.. Studies in Health Technology and Informatics, IOS Press, 2005, 112, pp.249-321. ⟨hal-03010736⟩

Cécile Germain-Renaud, Vincent Breton, Patrick Clarysse, Yann Gaudeau, Tristan Glatard, et al.. Grid-enabling medical image analysis. International Journal of Clinical Monitoring and Computing, Springer Verlag, 2005, 19 (4-5), pp.339-349. ⟨10.1007/s10877-005-0679-9⟩. ⟨inria-00174284⟩

Johan Montagnat, Vincent Breton, Isabelle Magnin. Partitionning medical image databases for content-based queries on a grid. Methods of Information in Medicine, Schattauer, 2005, 44 (2), pp.154-160. ⟨hal-00683642⟩

Leonardo Flórez-Valencia, Maciej Orkisz, Johan Montagnat. 3D graphical models for vascular-stent pose simulation. Machine Graphics & Vision, Instytut podstaw informatyki (Pologne), 2004, 13 (3), pp.235-248. ⟨hal-00682926⟩

Johan Montagnat, F. Bellet, Hugues Benoit-Cattin, Vincent Breton, Lionel Brunie, et al.. Medical images simulation storage and processing on the European DataGrid testbed. Journal of Grid Computing, Springer Verlag, 2004, 2, pp.387-400. ⟨10.1007/s10723-004-5744-y⟩. ⟨in2p3-00023294⟩

Johan Montagnat, Maxime Sermesant, Hervé Delingette, Grégoire Malandain, Nicholas Ayache. Anisotropic Filtering for Model Based Segmentation of 4D Cylindrical Echocardiographic Images. Pattern Recognition Letters, Elsevier, 2003, 24 (4-5), pp.815-828. ⟨10.1016/S0167-8655(02)00184-8⟩. ⟨inria-00615640v2⟩

Vincent Breton, R. Medina, Johan Montagnat. DataGrid prototype of a biomedical grid. Methods MIMST, 2003, 42, pp.1-5. ⟨in2p3-00013832⟩

Hervé Delingette, Johan Montagnat. Shape and Topology Constraints on Parametric Active Contours. Computer Vision and Image Understanding, Elsevier, 2001, 83 (2), pp.140--171. ⟨10.1006/cviu.2001.0920⟩. ⟨inria-00615109⟩

Luc Soler, Hervé Delingette, Grégoire Malandain, Johan Montagnat, Nicholas Ayache, et al.. Fully automatic anatomical, pathological, and functional segmentation from CT scans for hepatic surgery. Computer Aided Surgery, Taylor & Francis, 2001, 6 (3), pp.131-42. ⟨inria-00615108⟩

Johan Montagnat, Hervé Delingette, Nicholas Ayache. A review of deformable surfaces: topology, geometry and deformation. Image and Vision Computing, Elsevier, 2001, 9 (14), pp.1023-1040. ⟨10.1016/S0262-8856(01)00064-6⟩. ⟨inria-00615110v2⟩

Johan Montagnat, Hervé Delingette. Globally constrained deformable models for 3D object reconstruction. Signal Processing, Elsevier, 1998, 71 (2), pp.173--186. ⟨inria-00615089⟩

Amina Ghrissi, Fabien Squara, Johan Montagnat, Vicente Zarzoso. Identification of Spatiotemporal Dispersion Electrograms in Persistent Atrial Fibrillation Ablation Using Maximal Voltage Absolute Values. EUSIPCO-2020, 28th European Signal Processing Conference, Jan 2021, Amsterdam, Netherlands. ⟨hal-02756806v2⟩

Amina Ghrissi, Fabien Squara, Johan Montagnat, Vicente Zarzoso. Identification of Ablation Sites in Persistent Atrial Fibrillation Based on Spatiotemporal Dispersion of Electrograms Using Machine Learning. Computing in Cardiology, Sep 2020, Rimini, Italy. ⟨hal-03105200⟩

Amina Ghrissi, Douglas Almonfrey, Rafael Costa de Almeida, Fabien Squara, Johan Montagnat, et al.. Data Augmentation for Automatic Identification of Spatiotemporal Dispersion Electrograms in Persistent Atrial Fibrillation Ablation Using Machine Learning. 42nd Annual International Conferences of the IEEE Engineering in Medicine and Biology Society, IEEE, Jul 2020, Montreal, Canada. ⟨hal-02871770⟩

Abdoul Macina, Johan Montagnat, Olivier Corby. A SPARQL distributed query processing engine addressing both vertical and horizontal data partitions. BDA 2016 - 32ème Conférence sur la Gestion de Données - Principes, Technologies et Applications, Nov 2016, Poitiers, France. ⟨hal-01404165⟩

Franck Michel, Catherine Faron Zucker, Johan Montagnat. A Generic Mapping-Based Query Translation from SPARQL to Various Target Database Query Languages. 12th International Conference on Web Information Systems and Technologies (WEBIST'16), Apr 2016, Roma, Italy. ⟨hal-01280951⟩

Franck Michel, Catherine Faron Zucker, Johan Montagnat. A Mapping-based Method to Query MongoDB Documents with SPARQL. 27th International Conference on Database and Expert Systems Applications (DEXA 2016), Sep 2016, Porto, Portugal. ⟨hal-01330146⟩

Franck Michel, Cécile Callou, Catherine Faron Zucker, Olivier Gargominy, Chloé Martin, et al.. Construction d’un référentiel taxonomique commun pour des études sur l’histoire de la zoologie, l’archéozoologie et la biologie. SemWeb.Pro 2016, Nov 2016, Paris, France. ⟨hal-01401357⟩

Cécile Callou, Franck Michel, Catherine Faron Zucker, Chloé Martin, Johan Montagnat. Towards a Shared Reference Thesaurus for Studies on History of Zoology, Archaeozoology and Conservation Biology. Extended Semantic Web Confenrece 2015, workshop Semantic Web For Scientific Heritage (SW4SH), May 2015, Portoroz, Slovenia. ⟨hal-01146638⟩

Franck Michel, Loïc Djimenou, Catherine Faron Zucker, Johan Montagnat. Translation of Relational and Non-Relational Databases into RDF with xR2RML. 11th International Confenrence on Web Information Systems and Technologies (WEBIST'15), Oct 2015, Lisbon, Portugal. pp.443-454, ⟨10.5220/0005448304430454⟩. ⟨hal-01207828⟩

S. Cipiere, G. Ereteo, A. Gaignard, N. Boujelben, S. Gaspard, et al.. Global Initiative for Sentinel e-Health Network on Grid (GINSENG): Medical Data Integration and Semantic Developments for Epidemiology. Workshop on Clusters, Clouds and Grids for Health 2014, May 2014, Chicago, United States. pp.755-763, ⟨10.1109/CCGrid.2014.45⟩. ⟨hal-01048737⟩

B. Gibaud, G. Forestier, B. Benoit-Cattin, F. Cervenansky, P. Clarysse, et al.. Design of an ontology for the annotation of object models used for medical image simulation. Nouvelles méthodologies en imagerie du vivant, Dec 2012, Lyon, France. ⟨hal-00829556⟩

B. Gibaud, G. Forestier, H. Benoit-Cattin, F. Cervenansky, P. Clarysse, et al.. OntoVIP: an ontology for the annotation of object models used for medical image simulation. IEEE International Conference on Healthcare Informatics, Imaging and Systems Biology (HISB), Sep 2012, La Jolla, United States. pp.110, ⟨10.1109/HISB.2012.35⟩. ⟨hal-00830912⟩

Javier Rojas Balderrama, Tram Truong Huu, Johan Montagnat. Scalable and Resilient Workflow Executions on Production Distributed Computing Infrastructures. International Symposium on Parallel and Distributed Computing (ISPDC 2012), Jun 2012, Münich, Germany. pp.1-8. ⟨hal-00691579⟩

Franck Michel, Johan Montagnat, Tristan Glatard. Technical support for Life Sciences communities on a production grid infrastructure. HealthGrid'12, May 2012, Amsterdam, Netherlands. pp.1-10. ⟨hal-00677839⟩

Franck Michel, Tristan Glatard, Johan Montagnat. Achievements and perspectives of the biomed technical team. EGI Community Forum, Mar 2012, Munich, Germany. pp.PoS(EGICF12-EMITC2)015. ⟨hal-00760715⟩

Annie Authosserre-Cavarero, Frederic Bertrand, Mireille Blay- Fornarino, Philippe Collet, Hubert Dubois, et al.. Interopérabilité des systèmes d'information : approches dirigées par les modèles. Inforsid 2012, May 2012, Montpellier, France. pp.11-30. ⟨hal-00707536⟩

Olivier Corby, Alban Gaignard, Catherine Faron Zucker, Johan Montagnat. KGRAM Versatile Inference and Query Engine for the Web of Linked Data. IEEE/WIC/ACM International Conference on Web Intelligence, Dec 2012, Macao, China. pp.1-8. ⟨hal-00746772⟩

Alban Gaignard, Johan Montagnat, Catherine Faron Zucker, Olivier Corby. Semantic Federation of Distributed Neurodata. MICCAI Workshop on Data- and Compute-Intensive Clinical and Translational Imaging Applications, Oct 2012, Nice, France. pp.41-50. ⟨hal-00746765⟩

Alban Gaignard, Johan Montagnat, Catherine Faron Zucker, Olivier Corby. Fédération multi-sources en neurosciences : intégration de données relationnelles et sémantiques. IC pour l'Interopérabilité Sémantique dans les applications en e-Santé, Jun 2012, France. 6 p. ⟨hal-01018722⟩

Javier Rojas Balderrama, Tram Truong Huu, Johan Montagnat. A Comprehensive Framework for Scientific Applications Execution on Distributed Computing Infrastructures. Rencontres Scientifiques France Grilles 2011, Sep 2011, Lyon, France. ⟨hal-00653021⟩

Bernard Gibaud, Farooq Ahmad, Christian Barillot, Franck Michel, Bacem Wali, et al.. A federated system for sharing and reuse of images and image processing tools in neuroimaging. Computer Assisted Radiology and Surgery (CARS'11), Jun 2011, Berlin, Germany. ⟨hal-00690921⟩

Michel Dojat, Mélanie Pélégrini-Issac, Farooq Ahmad, Christian Barillot, Bénédicte Batrancourt, et al.. NeuroLOG: A framework for the sharing and reuse of distributed tools and data in neuroimaging. Organization for Human Brain Mapping (HBM'11), Jun 2011, Quebec, Canada. ⟨hal-00813796⟩

Bernard Gibaud, Gilles Kassel, Michel Dojat, Bénédicte Batrancourt, Franck Michel, et al.. NeuroLOG: sharing neuroimaging data using an ontology-based federated approach.. American Medical Informatics Association, Oct 2011, Washington DC, United States. pp.472-80. ⟨hal-00683087⟩

Rafael Ferreira da Silva, Sorina Camarasu-Pop, Baptiste Grenier, Vanessa Hamar, David Manset, et al.. Multi-infrastructure workflow execution for medical simulation in the Virtual Imaging Platform. HealthGrid 2011, Jun 2011, Bristol, United Kingdom. pp.1-10. ⟨hal-00677827⟩

Kassian Plankensteiner, Johan Montagnat, Radu Prodan. IWIR: A Language Enabling Portability Across Grid Workflow Systems. Workshop on Workflows in Support of Large-Scale Science (WORKS'11), Nov 2011, Seattle, United States. pp.97-106, ⟨10.1145/2110497.2110509⟩. ⟨hal-00677832⟩

Nadia Cerezo, Johan Montagnat. Scientific Workflow Reuse through Conceptual Workflows. Workshop on Workflows in Support of Large-Scale Science (WORKS'11), Nov 2011, Seattle, United States. pp.1-10. ⟨hal-00677831⟩

Alban Gaignard, Johan Montagnat, Bacem Wali, Bernard Gibaud. Characterizing semantic service parameters with Role concepts to infer domain-specific knowledge at runtime. International Conference on Knowledge Engineering and Ontology Development (KEOD'11), Oct 2011, Paris, France. pp.12. ⟨hal-00677829⟩

Trung-Tung Doan, Quang-Minh Dao, Trong-Hieu Vu, Hong-Phong Pham, Vincent Breton, et al.. g-INFO portal: a solution to monitor Influenza A on the Grid for non-grid users. HealthGrid, Jun 2011, Bristol, United Kingdom. pp.1-10. ⟨hal-00683104⟩

Philippe Collet, Filip Křikava, Johan Montagnat, Mireille Blay-Fornarino, David Manset. Issues and scenarios for self-managing grid middleware. Proceeding of the 2nd Workshop on Grids Meets Autonomic Computing, 2010, Washington D.C., United States. ⟨10.1145/1809029.1809033⟩. ⟨hal-01117780⟩

Tram Truong Huu, Johan Montagnat. Virtual resources allocation for workflow-based applications distribution on a cloud infrastructure. International Conference on Cluster, Cloud and Grid Computing (CCGrid 2010), May 2010, Melbourne, Australia. pp.1-6, ⟨10.1109/CCGRID.2010.23⟩. ⟨hal-00677810⟩

Franck Michel, Alban Gaignard, Farooq Ahmad, Christian Barillot, Bénédicte Batrancourt, et al.. Grid-wide neuroimaging data federation in the context of the NeuroLOG project.. HealthGrid'10, Jun 2010, Paris, France. pp.112-123, ⟨10.3233/978-1-60750-583-9-112⟩. ⟨inserm-00512799⟩

Javier Rojas Balderrama, Johan Montagnat, Diane Lingrand. jGASW: A Service-Oriented Framework Supporting High Throughput Computing and Non-functional Concerns. IEEE International Conference on Web Services (ICWS'10), Jul 2010, Miami, United States. pp.691-694, ⟨10.1109/ICWS.2010.59⟩. ⟨hal-00677819⟩

Philippe Collet, Filip Krikava, Johan Montagnat, Mireille Blay-Fornarino, David Manset. Issues and Scenarios for Self-Managing Grid Middleware. Workshop on Grids Meet Autonomic Computing, Jun 2010, Washington, DC, United States. pp.1-10. ⟨hal-00683109⟩

Diane Lingrand, Johan Montagnat. Efficient resubmission strategies to design robust grid production environments. IEEE e-Science (e-Science), Dec 2010, Brisbane, Australia. pp.198-205, ⟨10.1109/eScience.2010.11⟩. ⟨hal-00677824⟩

Ketan Maheshwari, Johan Montagnat. Scientific workflows development using both visual-programming and scripted representations. International Workshop on Scientific Workflows (SWF'10), Jul 2010, Miami, United States. pp.1-8. ⟨hal-00677817⟩

Alban Gaignard, Johan Montagnat. Intégration des connaissances en neurosciences dans un environnement multi-centrique. Journées francophones d'Ingénierie des Connaissances (IC 2010), Jun 2010, Nîmes, France. pp.21-30. ⟨hal-00691827⟩

Johan Montagnat, Tristan Glatard, Damien Reimert, Ketan Maheshwari, Eddy Caron, et al.. Workflow-based comparison of two Distributed Computing Infrastructures. Workshop on Workflows in Support of Large-Scale Science (WORKS 2010), Nov 2010, New Orleans, United States. pp.1-10, ⟨10.1109/WORKS.2010.5671856⟩. ⟨hal-00677820⟩

Guilherme Koslovski, Wai-Leong Yeow, Cedric Westphal, Tram Truong Huu, Johan Montagnat, et al.. Reliablility Support in Virtual Infrastructures. IEEE International Conference on Cloud Computing Technology and Science (CloudCom'10), Nov 2010, Indianapolis, United States. pp.49-58, ⟨10.1109/CloudCom.2010.23⟩. ⟨hal-00677823⟩

Sébastien Mosser, Mireille Blay-Fornarino, Johan Montagnat. Orchestration Evolution Following Dataflow Concepts: Introducing Unanticipated Loops Inside a Legacy Workflow. International Conference on Internet and Web Applications and Services (ICIW), May 2009, Venice, Italy. pp.1-6. ⟨hal-00531036⟩

Diane Lingrand, Johan Montagnat, Tristan Glatard. Modeling user submission strategies on production grids. International Symposium on High Performance Distributed Computing, Jun 2009, Munchen, Germany. pp.121-130, ⟨10.1145/1551609.1551633⟩. ⟨hal-00459073⟩

Diane Lingrand, Johan Montagnat, Janusz Martyniak, David Colling. Analyzing the EGEE production grid workload: application to jobs submission optimization. 14th Workshop on Job Scheduling Strategies for Parallel Processing, May 2009, Roma, Italy. pp.37--58, ⟨10.1007/978-3-642-04633-9⟩. ⟨hal-00459077⟩

Ketan Maheshwari, Carole Goble, Paolo Missier, Johan Montagnat. Medical Image Processing Workflow Support on the EGEE Grid with Taverna. 22nd IEEE International Symposium on Computer Based Medical Systems (CBMS'09), Aug 2009, New Mexico, United States. pp.1-7, ⟨10.1109/CBMS.2009.5255332⟩. ⟨hal-00677802⟩

Alban Gaignard, Johan Montagnat. A distributed security policy for neuroradiological data sharing. HealthGrid 2009, Jun 2009, Berlin, Germany. pp.257-262, ⟨10.3233/978-1-60750-027-8-257⟩. ⟨hal-00677795⟩

Ketan Maheshwari, Tristan Glatard, Joel Schaerer, Bertrand Delhay, Sorina Camarasu-Pop, et al.. Towards Production-level Cardiac Image Analysis with Grids. HealthGrid 2009, Jun 2009, Berlin, Germany. pp.31-40, ⟨10.3233/978-1-60750-027-8-31⟩. ⟨hal-00677800⟩

Johan Montagnat, Benjamin Isnard, Tristan Glatard, Ketan Maheshwari, Mireille Blay-Fornarino. A data-driven workflow language for grids based on array programming principles. International conference on High Performance Computing, networking, storage and analysis (SC09), Nov 2009, Portland, United States. pp.1-10, ⟨10.1145/1645164.1645171⟩. ⟨hal-00677806⟩

Guilherme Koslovski, Tram Truong Huu, Johan Montagnat, Pascale Vicat-Blanc Primet. Executing distributed applications on virtualized infrastructures specified with the VXDL language and managed by the HIPerNET framework. First International Conference, CloudComp 2009, Oct 2009, Munich, Germany. pp.3-19, ⟨10.1007/978-3-642-12636-9_1⟩. ⟨hal-00677804⟩

Pascale Vicat-Blanc Primet, Jean-Patrick Gelas, Olivier Mornard, Guilherme Koslovski, Vincent Roca, et al.. A Scalable Security Model for Enabling Dynamic Virtual Private Execution Infrastructures on the Internet. Proceedings of the 2009 9th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGRID '09), May 2009, Shanghai, China. pp.348-355, ⟨10.1109/CCGRID.2009.76⟩. ⟨hal-00677790⟩

Javier Rojas Balderrama, Diane Lingrand, Erik Pernod, Jean-Christophe Souplet, Xavier Pennec, et al.. NeuroLOG: Neuroscience Application Workflows Execution on the EGEE Grid. EGEE conference, Sep 2008, Istanbul, Turkey. ⟨hal-00461625⟩

Mathieu Acher, Ph. Collet, Philippe Lahire, Johan Montagnat. Imaging Services on the Grid as a Product Line: Requirements and Architecture. Workshop Service-Oriented Architectures and Software Product Lines - Putting Both Together (SOAPL'08), at SPLC 2008, Sep 2008, Limerick, Ireland. pp.6. ⟨hal-00419992⟩

Diane Lingrand, Johan Montagnat, Tristan Glatard. Estimating the execution context for refining submission strategies on production grids. CCGrid, May 2008, Lyon, France. pp.753 -- 758. ⟨hal-00461155⟩

Silvia Olabarriaga, Diane Lingrand, Johan Montagnat. MICCAI-Grid Workshop. MICCAI 2008, Sep 2008, New-York, United States. ⟨hal-00694970⟩

Diane Lingrand, Johan Montagnat, Tristan Glatard. Estimation of latency on production grid over several weeks. ICT4Health, Feb 2008, Manila, Philippines. pp.4. ⟨hal-00461615⟩

Johan Montagnat, Alban Gaignard, Diane Lingrand, Javier Rojas Balderrama, Philippe Collet, et al.. NeuroLOG: a community-driven middleware design. HealthGrid, Jun 2008, Chicago, United States. pp.49--58. ⟨hal-00461611⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. A probabilistic model to analyse workflow performance on production grids. 8th IEEE International Symposium on Cluster Computing and the Grid (CCGRID'08), May 2008, Lyon, France. pp.510-517, ⟨10.1109/CCGRID.2008.123⟩. ⟨hal-00481713⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. A framework for evaluating the impact of compression on registration algorithms without gold standard. International Conference on Image Processing, Oct 2008, San Diego, California, United States. pp.2912-2915, ⟨10.1109/ICIP.2008.4712404⟩. ⟨hal-00683112⟩

Tristan Glatard, Johan Montagnat. Implementation of Turing machines with the Scufl data-flow language. Workshop on Workflow Systems in e-Science, May 2008, Lyon, France. pp.1-10. ⟨hal-00683113⟩

Diane Lingrand, Tristan Glatard, Johan Montagnat. Taking into account the execution context to optimize medical image databases indexation. Second Singaporean-French Biomedical Imaging Workshop, Aug 2007, Lyon, France. ⟨hal-00461626⟩

Tristan Glatard, Diane Lingrand, Johan Montagnat, Michel Riveill. Impact of the execution context on Grid job performances. International Workshop on Context-Awareness and Mobility in Grid Computing (WCAMG'07), May 2007, Rio de Janeiro, Brazil. pp.713--718, ⟨10.1109/CCGRID.2007.62⟩. ⟨hal-00459267⟩

Clémentine Nemo, Tristan Glatard, Mireille Blay-Fornarino, Johan Montagnat. Merging overlapping orchestrations: an application to the Bronze Standard medical application. International Conference on Services Computing (SCC 2007), IEEE Computer Engineering, Jul 2007, Salt Lake City, Utah, United States. pp.364-371, ⟨10.1109/SCC.2007.79⟩. ⟨hal-00683168⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. Optimizing jobs timeouts on clusters and production grids. Cluster Computing and the Grid, May 2007, Rio de Janeiro, Brazil. pp.100-107, ⟨10.1109/CCGRID.2007.78⟩. ⟨hal-00683172⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. Efficient services composition for grid-enabled data-intensive applications. High Performance and Distributed Computing, Jun 2006, Paris, France. pp.333-334, ⟨10.1109/HPDC.2006.1652170⟩. ⟨hal-00683201⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. Probabilistic and dynamic optimization of job partitioning on a grid infrastructure. Parallel, Distributed and network-based Processing, Feb 2006, Montbéliard-Sochaux, France. pp.231-238, ⟨10.1109/PDP.2006.61⟩. ⟨hal-00683203⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. An experimental comparison of Grid5000 clusters and the EGEE grid. Experimental Grid testbeds for the assessment of large-scale distributed applications and tools, Jun 2006, Paris, France. pp.1-10. ⟨hal-00683199⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. Medical image registration algorithms assessment: Bronze Standard application enactment on grids using the MOTEUR workflow engine. HealthGrid conference (HealthGrid'06), Valencia, Spain, June 7-9, Jun 2006, Valencia, Spain. pp.93-103. ⟨hal-00683188⟩

Tristan Glatard, David Emsellem, Johan Montagnat. Generic web service wrapper for efficient embedding of legacy codes in service-based workflows. Grid-Enabling Legacy Applications and Supporting End Users Workshop, Jun 2006, Paris, France. pp.1-10. ⟨hal-00683196⟩

Johan Montagnat, Tristan Glatard, Diane Lingrand. Data composition patterns in service-based workflows. Workshop on Workflows in Support of Large-Scale Science (WORKS'06), Jun 2006, Paris, France. pp.1-10. ⟨hal-00683193⟩

Johan Montagnat, Daniel Jouvenot, Christophe Pera, Akos Frohner, Peter Kunszt, et al.. Bridging clinical information systems and grid middleware: a Medical Data Manager. HealthGrid, Jun 2006, Valencia, Spain. pp.14-24. ⟨hal-00683184⟩

Tristan Glatard, Xavier Pennec, Johan Montagnat. Performance evaluation of grid-enabled registration algorithms using bronze-standards. Medical Image Computing and Computer-Assisted Intervention (MICCAI 2006), Oct 2006, Copenhagen, Denmark. pp.152-160, ⟨10.1007/11866763_19⟩. ⟨hal-00683176⟩

Sébastien Varette, Jean-Louis Roch, Johan Montagnat, Ludwig Seitz, Jean-Marc Pierson, et al.. Safe Distributed Architecture for Image-based Computer Assisted Diagnosis. Workshop on Health Pervasive Systems, Jun 2006, Lyon, France. pp.1-10. ⟨hal-00683206⟩

Diane Lingrand, Johan Montagnat. Levelset and B-spline deformable model techniques for image segmentation: a pragmatic comparative study. 14th Scandinavian Conference on Image Analysis, Jun 2005, Joennsu, Finland. pp.25--34, ⟨10.1007/11499145_4⟩. ⟨hal-00460711⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. Grid-enabled workflows for data intensive medical applications. International Symposium on Computer-Based Medical Systems (CBMS), Jun 2005, Dublin, Ireland. pp.537-542, ⟨10.1109/CBMS.2005.61⟩. ⟨hal-00691613⟩

Cécile Germain, Vincent Breton, Patrick Clarysse, Yann Gaudeau, Tristan Glatard, et al.. Grid-enabling medical image analysis. Cluster Computing and Grid 2005 (CCGrid05) Bio-Medical Computations on the Grid (Bio-Grid), May 2005, Cardiff, United Kingdom. pp.339-349, ⟨10.1007/s10877-005-0679-9⟩. ⟨hal-00166971⟩

Ludwig Seitz, Johan Montagnat, Jean-Marc Pierson, Didier Oriol, Diane Lingrand. Authentication and autorisation prototype on the microgrid for medical data management. HealthGrid (HG), Apr 2005, Oxford, United Kingdom. pp.222-233. ⟨hal-00691618⟩

Sébastien Varette, Sébastien Georget, Johan Montagnat, Jean-Louis Roch, Franck Leprévost. Distributed Authentication in GRID5000. Grid Computing and its Application to Data Analysis (GADA'05), Nov 2005, Agia Napa, Cyprus. pp.314-326, ⟨10.1007/11575863_51⟩. ⟨hal-00691609⟩

Tristan Glatard, Johan Montagnat, Isabelle Magnin. Texture based medical image indexing and retrieval: application to cardiac imaging. workshop on Multimedia Information Retrieval (MIR), Oct 2004, New York, United States. pp.135-142. ⟨hal-00691625⟩

Diane Lingrand, Arnaud Charnoz, Malik Koulibaly, Jacques Darcourt, Johan Montagnat. Toward accurate segmentation of the LV myocardium and chamber for volumes estimation in gated SPECT sequences. European Conference on Computer Vision (ECCV'04), May 2004, Prague, Czech Republic. pp.1-10. ⟨hal-00691648⟩

Bo Qiu, Patrick Clarysse, Johan Montagnat, Marc Janier, Didier Vray. Comparison of 3D Deformable Models For in vivo Measurements of Mouse Embryo from 3D Ultrasound Images. International Ultrasonics, Ferroelectrics, and Frequency Control (UFFC'04), Aug 2004, Montreal, Canada. pp.1-10. ⟨hal-00691644⟩

Vincent Breton, Christophe Blanchet, L. Maigne, Johan Montagnat. Grid technology for biomedical applications. VECPAR 2004 Conference, Jun 2004, Valencia, Spain. pp.204-218, ⟨10.1007/b106965⟩. ⟨in2p3-00171787⟩

Derek Hill, Xavier Pennec, Michael Burns, Michael Parkin, Jo Hajnal, et al.. Intraoperable Medical Image Registration Grid Service. Proc. of HealthGrid 2004, 2004, Clermont-Ferrand, France. ⟨inria-00615977⟩

Johan Montagnat, Vincent Breton, I.E. Magnin. Medical image databases content-based queries partitioning on a grid. HealthGRID 2004, Jan 2004, Clermont-Ferrand, France. pp.154-160. ⟨in2p3-00024242⟩

Jean-Marc Pierson, Ludwig Seitz, Hector Duque, Johan Montagnat. MetaData for Efficient, Secure and Extensible Access to Data in a Medical Grid. Database and Expert System Applications (DEXA'04), Sep 2004, Zaragoza, Spain. pp.562-566. ⟨hal-00691642⟩

Pascale Vicat-Blanc Primet, Johan Montagnat, Fabien Chanussot. Flexible and Dynamic Control of Network QoS in Grid environments: the QoSINUS approach. Cluster 2004, Sep 2004, San Diego, United States. pp.1-10. ⟨hal-00691636⟩

Arnaud Charnoz, Diane Lingrand, Johan Montagnat. A levelset based method for segmenting the heart in 3D+T gated SPECT images. International Workshop on Functional Imaging and Modeling of the Heart (FIMH'03), Jun 2003, Lyon, France. pp.50-59. ⟨hal-00691656⟩

Johan Montagnat, Eduardo Davila, Isabelle Magnin. Efficient visualization of 3D medical scenes for remote interactive applications. Image and Signal Processing and Analysis (ISPA), Sep 2003, Roma, Italy. pp.1-10. ⟨hal-00691652⟩

Johan Montagnat, Vincent Breton, Isabelle Magnin. Using grid technologies to face medical image analysis challenges. Biogrid'03 workshop, May 2003, Tokyo, Japan. pp.588-593. ⟨hal-00691658⟩

Johan Montagnat, Hector Duque, Jean-Marc Pierson, Vincent Breton, Lionel Brunie, et al.. Medical Image Content-Based Queries using the Grid. HealthGrid'03, Jan 2003, Lyon, France. pp.138-147. ⟨hal-00683997⟩

Hector Duque, J Montagnat, Jean-Marc Pierson, Lionel Brunie, Isabelle Magnin. A Distributed Medical Data Manager for Grids, Biogrid 2003. Biogrid 2003, colocated with IEEE/ACM CCGrid 2003, May 2003, Tokyo, Japan. pp.588-593. ⟨hal-01514896⟩

Hector Duque, Johan Montagnat, Jean-Marc Pierson, Lionel Brunie, Isabelle Magnin. DM2: A Distributed Medical Data Manager for Grids. Biogrid'03 workshop, May 2003, Tokyo, Japan. pp.138-147. ⟨hal-00691663⟩

Didier Vray, A. Discher, J. Lefloc'H, W. Mai, Patrick Clarysse, et al.. 3D Quantification of Ultrasound Images: Application to Mouse Embryo Imaging In Vivo. Ultrasonics, Ferroelectrics, and Frequency Control Society (UFFC02), Oct 2002, Munich, Germany. pp.1-10. ⟨hal-00691671⟩

Leonardo Flórez-Valencia, Johan Montagnat, Maciej Orkisz. 3D graphical models for vascular-stent pose simulation. International Conference on Computer Vision and Graphics (ICCVG02), Sep 2002, Zakopane, Poland. pp.1-10. ⟨hal-00691676⟩

Hervé Delingette, Eric Bardinet, David Rey, J.D. Lemarechal, Johan Montagnat, et al.. YAV++: a Software Platform for Medical Image Processing and Visualization. Workshop on Interactive Medical Image Visualization and Analysis satellite symposia of MICCAI, IMIVA'01, 2001, Utrecht, The Netherlands, Netherlands. ⟨inria-00615901⟩

Diane Lingrand, Johan Montagnat, Louis D. Collins, Jean Gotman. Compensating Small Head Displacements for an accurate fMRI Registration. Scandinavian Conference on Image Analysis (SCIA), Jun 2001, Bergen, Norway. pp.10-16. ⟨hal-00691688⟩

Louis Collins, Johan Montagnat, A.P. Zijdenbos, Alan Evans. Automated estimation of brain volume in Multiple Sclerosis with BICCR. Information Processing in Medical Imaging (IPMPI01), Jun 2001, Davis, CA, United States. pp.1-10. ⟨hal-00691684⟩

Luc Soler, Olivier Dourthe, Grégoire Malandain, Johan Montagnat, Hervé Delingette, et al.. A new 3D segmentation of liver neoplasm, portal venous system and parenchymal contours. European Congress of Radiology, 2000, Vienne (Autriche), Austria. ⟨inria-00615847⟩

Luc Soler, Hervé Delingette, Grégoire Malandain, Johan Montagnat, Nicholas Ayache, et al.. A Fully Automatic Anatomical, Pathological and Fonctionnal Segmentation from CT-scans for Hepatic Surgery. Medical Imaging 2000, SPIE, 2000, San Diego, United States. pp.246--255. ⟨inria-00615852⟩

Hervé Delingette, Johan Montagnat. New Algorithms for Controlling Active Contours Shape and Topology. European Conference on Computer Vision (ECCV00), Jun 2000, Dublin, Ireland. pp.381-395. ⟨inria-00615846v2⟩

Johan Montagnat, Hervé Delingette, Nicolas Scapel, Nicholas Ayache. Surface Simplex Meshes for 3D Medical Image Segmentation. International Conference on Robotics and Automation (ICRA00), Apr 2000, San Francisco, CA, United States. pp.864 - 870, ⟨10.1109/ROBOT.2000.844158⟩. ⟨hal-00691695⟩

Johan Montagnat, Hervé Delingette. Space and Time Shape Constrained Deformable Surfaces for 4D Medical Image Segmentation. Medical Image Computing and Computer Assisted Intervention (MICCAI00), Oct 2000, Pittsburgh, PA, United States. pp.196-205, ⟨10.1007/978-3-540-40899-4_20⟩. ⟨inria-00615851v2⟩

Johan Montagnat, Hervé Delingette, Grégoire Malandain. Cylindrical Echocardiographic Image Segmentation Based on 3D Deformable Models. Medical Image Computing and Computer-Assisted Intervention - MICCAI'99, Sep 1999, Cambridge, United Kingdom. pp.168-175, ⟨10.1007/10704282_18⟩. ⟨hal-00691700⟩

Hervé Delingette, Johan Montagnat. General Deformable Model Approach for Model-Based Reconstruction. International Workshop on Model-Based 3D Image Analysis (MB3IA98), Jan 1998, Bombay, India. pp.1-10. ⟨hal-00691702⟩

Johan Montagnat, Hervé Delingette. Reconstruction surfacique et segmentation robuste à base de maillages déformables. Proceedings of Sixth Orasis conference (ORASIS'97), 1997, La Colle-sur-Loup, France, France. ⟨inria-00615791⟩

Johan Montagnat, Hervé Delingette, Nicholas Ayache, Jean-Marie Clément, C. Roy, et al.. Liver Segmentation in Contrast Enhanced Helical CT-Scans. Proceedings of World Congress on Medical Physics and Biomedical Engineering, 1997, Nice, France, France. ⟨inria-00615792⟩

Luc Soler, Grégoire Malandain, Johan Montagnat, Hervé Delingette, Nicholas Ayache, et al.. Automatic Segmentation of Portal Vein in CT-Scans of the Liver. Proceedings of World Congress on Medical Physics and Biomedical Engineering, 1997, Nice, France, France. pp.788. ⟨inria-00615793⟩

Johan Montagnat, Hervé Delingette. Volumetric Medical Images Segmentation using Shape Constrained Deformable Models. Computer Vision Virtual reality and Robotics in Medicine (CVRMed97), Mar 1997, Grenoble, France. pp.13-22, ⟨10.1007/BFb0029220⟩. ⟨inria-00615795v2⟩

Johan Montagnat, Hervé Delingette. A Hybrid Framework for Surface Registration and Deformable Models. Computer Vision and Pattern Recognition (CVPR97), Jun 1997, San Juan, Puerto Rico. pp.1041-1046, ⟨10.1109/CVPR.1997.609458⟩. ⟨inria-00615782v2⟩

Robert Rönngren, Michael Liljenstam, Rassul Ayani, Johan Montagnat. A Comparative Study of State Saving Mecanisms for Time Warp Synchronized Parallel Discrete Event Simulation. Annual Simulation Symposium (ASS'96), Mar 1996, New Orleans, United States. pp.1-10. ⟨hal-00691812⟩

Robert Rönngren, Michael Liljenstam, Rassul Ayani, Johan Montagnat. Transparent Incremental State Saving in Time Warp Parallel Discrete Event Simulation. Parallel And Distributed Simulation (PADS96), May 1996, Philadelphia, United States. pp.70-77. ⟨hal-00691810⟩

Franck Michel, Catherine Faron Zucker, Johan Montagnat. Bridging the Semantic Web and NoSQL Worlds: Generic SPARQL Query Translation and Application to MongoDB. Transactions on Large-Scale Data- and Knowledge-Centered Systems XL, 11360, Springer, pp.125-165, 2019, LNCS, ISBN: 978-3-662-58664-8. ⟨hal-01926379⟩

Franck Michel, Loïc Djimenou, Catherine Faron Zucker, Johan Montagnat. Translation of Heterogeneous Databases into RDF, and Application to the Construction of a SKOS Taxonomical Reference. Web Information Systems and Technologies: 11th International Conference, WEBIST 2015, Revised Selected Papers, 246, Springer, pp.275-296, 2016, Lecture Notes in Business Information Processing, 978-3-319-30995-8. ⟨10.1007/978-3-319-30995-5_14⟩. ⟨hal-01337308⟩

Cecile Germain-Renaud, Vincent Breton, Patrick Clarysse, Bertrand Delhay, Yann Gaudeau, et al.. Grid Analysis of Radiological Data. Mario Cannataro (Ed.). Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, IGI, pp.363-391, 2009, chapter 19, ⟨10.4018/978-1-60566-374-6.ch019⟩. ⟨hal-00683992⟩

Tristan Glatard, Gergely Sipos, Johan Montagnat, Zoltan Farkas, Péter Kacsuk. Workflow Level Parametric Study Support by MOTEUR and the P-GRADE Portal. Workflows for e-Science, Springer, chap. 18, 279-299, 2007, ISBN 978-1-84628-519-6. ⟨hal-00682801⟩

Johan Montagnat, Ian Taylor. Proceedings of the 10th Workshop on Workflows in Support of Large-Scale Science. Austin, TX, United States. 2015, ⟨10.1145/2822332⟩. ⟨hal-01338383⟩

Johan Montagnat, Ian Taylor. Proceedings of the 9th Workshop on Workflows in Support of Large-Scale Science. New Orleans, LA, United States. 2014, ⟨10.1109/WORKS.2014.1⟩. ⟨hal-01338381⟩

Johan Montagnat, Ian Taylor. Proceedings of the 8th Workshop on Workflows in Support of Large-Scale Science. Denver, CO, United States. 2013, ⟨10.1145/2534248⟩. ⟨hal-01338376⟩

Johan Montagnat, Ian Taylor. Journal of Grid Computing, special issue on workflows. France. 11 (3), Springer, 2013, Journal of Grid Computing, ISSN 1570-7873. ⟨10.1007/s10723-013-9270-7⟩. ⟨hal-01338389⟩

S. Gesing, T. Glatard, J. Krüger, S. Delgado Olabarriaga, T. Solomonides, et al.. HealthGrid Applications and Technologies meet Science Gateways for Life Sciences, proceedings of HealthGrid 2012. France. IOS Press, pp.232, 2012, 978-1-61499-054-3. ⟨hal-00842780⟩

Johan Montagnat, Ian Taylor. Proceedings of the 7th Workshop on Workflows in Support of Large-Scale Science. Salt Lake City, UT, United States. 2012, ⟨10.1109/SC.Companion.2012.6⟩. ⟨hal-01338373⟩

Johan Montagnat, Ian Taylor. Proceedings of the 6th Workshop on Workflows in Support of Large-Scale Science. Seattle, WA, United States. 2011, ⟨10.1145/2110497⟩. ⟨hal-01338366⟩

Franck Michel, Loïc Djimenou, Catherine Faron Zucker, Johan Montagnat. xR2RML: Relational and Non-Relational Databases to RDF Mapping Language. [Research Report] ISRN I3S/RR 2014-04-FR, CNRS. 2017. ⟨hal-01066663v5⟩

Franck Michel, Catherine Faron Zucker, Johan Montagnat. Mapping-based SPARQL access to a MongoDB database. [Research Report] CNRS. 2016. ⟨hal-01245883v5⟩

Franck Michel, Johan Montagnat, Catherine Faron Zucker. A survey of RDB to RDF translation approaches and tools. [Research Report] I3S. 2014. ⟨hal-00903568v2⟩

Philippe Collet, Mohammed-Amine Abchir, Thierry Bathias, Mireille Blay-Fornarino, Filip Krikava, et al.. Requirements of the SALTY project. 2010. ⟨hal-00539093⟩

Fabienne Anhalt, Christophe Blanchet, Romaric Guillier, Tram Truong Huu, Guilherme Koslovski, et al.. HIPCAL: final report. [Research Report] 2010. ⟨hal-00790584⟩

Pascale Primet Vicat-Blanc, Guilherme Koslovski, Fabienne Anhalt, Tram Truong Huu, Johan Montagnat. Exploring the Virtual Infrastructures as a Service concept with HIPerNET. [Research Report] RR-7185, INRIA. 2010, pp.36. ⟨inria-00450409v2⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec, David Emsellem, Diane Lingrand. MOTEUR: a data-intensive service-based workflow manager. 2006, pp.37. ⟨hal-00691832⟩

Tristan Glatard, Johan Montagnat, Xavier Pennec. Optimizing jobs timeouts on clusters and production grids. 2006, pp.23. ⟨hal-00691828⟩

Pascale Vicat-Blanc Primet, Johan Montagnat, Fabien Chanussot, Mathieu Goutelle. Flexible Management and Dynamic Control of Network Quality of Service in Grid environments : the QoSinus approach. [Research Report] RR-5083, INRIA. 2004. ⟨inria-00071500⟩

Hervé Delingette, Johan Montagnat. Topology and Shape Constraints on Parametric Active Contours. [Research Report] RR-3880, INRIA. 2000, pp.43. ⟨inria-00072773⟩

Johan Montagnat, Hervé Delingette, Nicolas Scapel, Nicholas Ayache. Representation, Shape, Topology and Evolution of Deformable Surfaces. Application to 3D Medical Image Segmentation. [Research Report] RR-3954, INRIA. 2000, pp.69. ⟨inria-00072695⟩

Johan Montagnat, Hervé Delingette. Spatial and Temporal Shape Constrained Deformable Surfaces for 3D and 4D Medical Image Segmentation. RR-4078, INRIA. 2000. ⟨inria-00072555⟩

Johan Montagnat. Modèles déformables pour la segmentation et la modélisation d'images médicales 3D et 4D. Imagerie médicale. Université Nice Sophia Antipolis, 1999. Français. ⟨tel-00683368⟩

Johan Montagnat. Segmentation d'image médicales volumiques à l'aide de maillages déformables contraints. Imagerie médicale. École normale supérieure de Cachan - ENS Cachan; Université Paris Sud - Paris XI, 1996. Français. ⟨tel-00691915⟩

Johan Montagnat. Processing and analyzing large medical image sets. Computer Science [cs]. Université Nice Sophia Antipolis, 2006. ⟨tel-00460766⟩