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Jerome MURIENNE

48
Documents
Identifiants chercheurs
  • IdHAL jerome-murienne
  • ORCID 0000-0003-1474-7829
  • Google Scholar : https://scholar.google.com/citations?hl=en&user=Uc-eBGMAAAAJ&view_op=list_works&sortby=pubdate
  • IdRef : 111180228

Présentation

Publications

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Environmental DNA reveals a mismatch between diversity facets of Amazonian fishes in response to contrasting geographical, environmental and anthropogenic effects

Opale Coutant , Céline Jézéquel , Karel Mokany , Isabel Cantera , Raphaël Covain
Global Change Biology, 2023, 29 (7), pp.1741-1758. ⟨10.1111/gcb.16533⟩
Article dans une revue hal-04060932v1
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Inferring functional diversity from environmental DNA metabarcoding

Céline Condachou , Tristan Milhau , Jérôme Murienne , Sébastien Brosse , Sébastien Villéger
Environmental DNA, 2023, 5 (5), pp.934-944. ⟨10.1002/edn3.391⟩
Article dans une revue hal-04269097v1
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Pangolin genomes offer key insights and resources for the world’s most trafficked wild mammals

Sean Heighton , Rémi Allio , Jérôme Murienne , Jordi Salmona , Hao Meng
Molecular Biology and Evolution, 2023, 40 (10), pp.msad190. ⟨10.1093/molbev/msad190⟩
Article dans une revue hal-04251934v1
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Ants of French Guiana: 16S rRNA sequence dataset

Gaëtan Rongier , Audrey Sagne , Sandrine Etienne , Frederic Petitclerc , Gaelle Jaouen
Biodiversity Data Journal, 2023, 11, pp.e91577. ⟨10.3897/bdj.11.e91577⟩
Article dans une revue hal-04182572v1

Characterizing the spatial signal of environmental DNA in river systems using a community ecology approach

Isabel Cantera , Jean‐baptiste Decotte , Tony Dejean , Jérôme Murienne , Régis Vigouroux
Molecular Ecology Resources, 2022, 22 (4), pp.1274-1283. ⟨10.1111/1755-0998.13544⟩
Article dans une revue hal-04060858v2
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Low level of anthropization linked to harsh vertebrate biodiversity declines in Amazonia

Isabel Cantera , Opale Coutant , Céline Jézéquel , Jean-Baptiste Decotte , Tony Dejean
Nature Communications, 2022, 13 (1), pp.3290. ⟨10.1038/s41467-022-30842-2⟩
Article dans une revue hal-03868282v1
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Applying convolutional neural networks to speed up environmental DNA annotation in a highly diverse ecosystem

Benjamin Flück , Laëtitia Mathon , Stéphanie Manel , Alice Valentini , Tony Dejean
Scientific Reports, 2022, 12 (1), pp.10247. ⟨10.1038/s41598-022-13412-w⟩
Article dans une revue hal-03824009v1
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How tectonic, volcanic and climatic processes in Andean ‘sky islands’ shaped the diversification of endemic ground beetles

Jérôme Murienne , Álvaro Barragán , Sophie Manzi , Pablo Samaniego , Pierre Moret
Journal of Biogeography, 2022, 49 (11), pp.2077-2090. ⟨10.1111/jbi.14495⟩
Article dans une revue hal-03861684v1
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On the presence of the giant freshwater prawn, Macrobrachium rosenbergii, in French Guiana confirmed by citizen science and genetic analyses

Jérôme Murienne , Johan Chevalier , Simon Clavier
Water Biology and Security, 2022, 1 (2), pp.100039. ⟨10.1016/j.watbs.2022.100039⟩
Article dans une revue hal-03868269v1
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Functional and taxonomic responses of tropical moth communities to deforestation

Yenny Correa‐carmona , Rodolphe Rougerie , Pierre Arnal , Liliana Ballesteros‐mejia , Jan Beck
Insect conservation and diversity, 2022, 15 (2), pp.236-247. ⟨10.1111/icad.12549⟩
Article dans une revue hal-03419963v1

Biodiversity and vector‐borne diseases: Host dilution and vector amplification occur simultaneously for Amazonian leishmaniases

Arthur Kocher , Josselin Cornuault , Jean‐charles Gantier , Sophie Manzi , Agathe Chavy
Molecular Ecology, 2022, ⟨10.1111/mec.16341⟩
Article dans une revue hal-03576716v1
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Unraveling the dietary diversity of Neotropical top predators using scat DNA metabarcoding: A case study on the elusive Giant Otter

Erwan Quéméré , Marie Aucourd , Valérie Troispoux , Sébastien Brosse , Jérôme Murienne
Environmental DNA, 2021, 3 (5), pp.889-900. ⟨10.1002/edn3.195⟩
Article dans une revue hal-03217686v1
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Multi-taxa environmental DNA inventories reveal distinct taxonomic and functional diversity in urban tropical forest fragments

Julian Donald , Jérôme Murienne , Jérôme Chave , Amaia Iribar , Eliane Louisanna
Global Ecology and Conservation, 2021, 29, pp.e01724. ⟨10.1016/j.gecco.2021.e01724⟩
Article dans une revue hal-03282383v1
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At each site its diversity: DNA barcoding reveals remarkable earthworm diversity in neotropical rainforests of French Guiana

Marie-Eugénie Maggia , Thibaud Decaëns , Emmanuel Lapied , Lise Dupont , Virginie Roy
Applied Soil Ecology, 2021, 164, pp.103932. ⟨10.1016/j.apsoil.2021.103932⟩
Article dans une revue hal-03648854v1

Amazonian mammal monitoring using aquatic environmental DNA

Opale Coutant , Cécile Richard‐hansen , Benoit de Thoisy , Jean‐baptiste Decotte , Alice Valentini
Molecular Ecology Resources, 2021, 21 (6), pp.1875-1888. ⟨10.1111/1755-0998.13393⟩
Article dans une revue hal-03534348v1
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Ecology, evolution, and epidemiology of zoonotic and vector-borne infectious diseases in French Guiana: Transdisciplinarity does matter to tackle new emerging threats

Benoît de Thoisy , Olivier Duron , Loïc Epelboin , Lise Musset , Philippe Quénel
Infection, Genetics and Evolution, 2021, 93, pp.104916. ⟨10.1016/j.meegid.2021.104916⟩
Article dans une revue pasteur-03261181v1

Integrative taxonomy of the genus Dyscolus (Coleoptera, Carabidae, Platynini) in Ecuadorian Andes

Pierre Moret , Jérôme Murienne
European Journal of Taxonomy, 2020, 646, ⟨10.5852/ejt.2020.646⟩
Article dans une revue hal-02995366v1
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Integrative taxonomy of the genus Dyscolus (Coleoptera, Carabidae, Platynini) in Ecuadorian Andes

Pierre Moret  , Jérôme Murienne
European Journal of Taxonomy, 2020, 646, pp.1-55. ⟨10.5852/ejt.2020.646⟩
Article dans une revue hal-03504601v1
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First case of parthenogenesis in ladybirds (Coleoptera: Coccinellidae) suggests new mechanisms for the evolution of asexual reproduction

Alexandra Magro , Emilie Lecompte , Jean-Louis Hemptinne , António Lucas Soares , Anne‐marie Dutrillaux
Journal of Zoological Systematics and Evolutionary Research, 2020, 58 (1), pp.194-208. ⟨10.1111/jzs.12339⟩
Article dans une revue hal-02404220v1
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Detecting fish assemblages with environmental DNA: Does protocol matter? Testing eDNA metabarcoding method robustness

Opale Coutant , Isabel Cantera , Kévin Cilleros , Tony Dejean , Alice Valentini
Environmental DNA, 2020, ⟨10.1002/edn3.158⟩
Article dans une revue hal-02995383v1
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Species better track climate warming in the oceans than on land

Jonathan Roger Michel Henri Lenoir , Romain R. Bertrand , Lise Comte , Luana Bourgeaud , Tarek Hattab
Nature Ecology & Evolution, 2020, 4 (8), pp.1044-1059. ⟨10.1038/s41559-020-1198-2⟩
Article dans une revue hal-02995372v1

High altitude endemic carabid beetles as biogeographic indicators: a case study in equatorial Andes

Pierre Moret , Álvaro Barragán , Jérôme Murienne , Arnaud Faille , Mauro Gobbi
ARPHA Conference Abstracts, 2019, 2, ⟨10.3897/aca.2.e38693⟩
Article dans une revue hal-02415812v1

Aquatic eDNA for monitoring French Guiana biodiversity

Jérôme Murienne , Isabel Cantera , Axel Cerdan , Kévin Cilleros , Jean-Baptiste Decotte
Biodiversity Data Journal, 2019, 7, ⟨10.3897/BDJ.7.e37518⟩
Article dans une revue hal-02404123v1

Habitats shape taxonomic and functional composition of Neotropical ant assemblages

Mélanie Fichaux , Benoît Béchade , Julian Donald , Arthur Weyna , Jacques Hubert Charles Delabie
Oecologia, 2019, 189 (2), pp.501-513. ⟨10.1007/s00442-019-04341-z⟩
Article dans une revue hal-02322672v1

Descriptcion de una nueva especie del genero Doxocopa Hübner, 1819, del Choco ecuatoriano

Mohamed Benmesbah , Mauro Costa , Stephane Attal , Angel L. Viloria , Jérôme Murienne
Antenor, 2019
Article dans une revue hal-02404442v1

Complete mitochondrial genome of the river stingray Potamotrygon orbignyi (Myliobatiformes: Potamotrygonidae)

David Ory , Yves Cuenot , Régis Vigouroux , Raphaël Covain , Sebastien Brosse
Mitochondrial DNA Part B Resources, 2019, 4 (2), pp.3153-3154. ⟨10.1080/23802359.2019.1666683⟩
Article dans une revue hal-02404214v1

High-throughput sequencing of kDNA amplicons for the analysis of Leishmania minicircles and identification of Neotropical species

Arthur Kocher , Sophie Valière , Anne-Laure Bañuls , Jérôme Murienne
Parasitology, 2018, 145 (5), pp.585-594. ⟨10.1017/S0031182017002013⟩
Article dans une revue hal-02404093v1

Cracking the Code: Examination of Species Delimitations among Hamadryas Butterflies with DNA Barcodes Suggests Caribbean Cracker is Hamadryas februa Hübner (Nymphalidae: Biblidinae)

Ivonne Garzón-Orduña , Andrew Brower , Maria Kamilari , Amaia Iribar , Jérôme Murienne
Journal of the Lepidopterists' Society, 2018, 72 (1), pp.53-73. ⟨10.18473/lepi.72i1.a6⟩
Article dans une revue hal-02404097v1
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DNA reference libraries of French Guianese mosquitoes for barcoding and metabarcoding

Stanislas Talaga , Céline Leroy , Amandine Guidez , Isabelle Dusfour , Romain Girod
PLoS ONE, 2017, 12 (12), pp.e0176993. ⟨10.1371/journal.pone.0176993⟩
Article dans une revue hal-02193342v1
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Evaluation of short mitochondrial metabarcodes for the identification of Amazonian mammals

Arthur Kocher , Benoît de Thoisy , Francois Catzeflis , Maïlis Huguin , Sophie Valière
Methods in Ecology and Evolution, 2017, 8 (10), pp.1276 - 1283. ⟨10.1111/2041-210X.12729⟩
Article dans une revue hal-01836328v1

iDNA screening: Disease vectors as vertebrate samplers

Arthur Kocher , Benoit de Thoisy , François Catzeflis , Sophie Valière , Anne-Laure Bañuls
Molecular Ecology, 2017, 26 (22), pp.6478 - 6486. ⟨10.1111/mec.14362⟩
Article dans une revue hal-01761584v1

Vector soup : high-throughput identification of Neotropical phlebotomine sand flies using metabarcoding

Arthur Kocher , Jean-Charles Gantier , Pascal Gaborit , Lucie Zinger , Helene Holota
Molecular Ecology Resources, 2017, 17 (2), pp.172-182. ⟨10.1111/1755-0998.12556⟩
Article dans une revue hal-01603943v1

Shotgun assembly of the complete mitochondrial genome of the neotropical cracker butterfly Hamadryas epinome\

Sebastien Cally , Emeline Lhuillier , Amaia Iribar , Ivonne Garzón-Orduña , Eric Coissac
Mitochondrial DNA Part A, 2016, 27 (3), pp.1864-1866. ⟨10.3109/19401736.2014.971262⟩
Article dans une revue hal-02632787v1

Unraveling the biogeographical history of Chrysobalanaceae from plastid genomes

Léa Bardon , Cynthia Sothers , Ghillean Prance , Pierre-Jean Malé , Zhenxiang Xi
American Journal of Botany, 2016, 103 (6), pp.1089-1102. ⟨10.3732/ajb.1500463⟩
Article dans une revue hal-03132947v1

Complete mitochondrial genome ofLutzomyia (Nyssomyia) umbratilis (Diptera: Psychodidae), the main vector of Leishmania guyanensis

Arthur Kocher , Jean-Charles Gantier , Hélène Holota , Céline Jeziorski , Eric Coissac
Mitochondrial DNA Part A, 2016, 27 (6), pp.4219-4221. ⟨10.3109/19401736.2015.1022748⟩
Article dans une revue hal-01602798v1

Museomics illuminate the history of an extinct, paleoendemic plant lineage (Hesperelaea, Oleaceae) known from an 1875 collection from Guadalupe Island, Mexico

Loubab Zedane , Cynthia Hong-Wa , Jérôme Murienne , Celine Jeziorski , Bruce G. Baldwin
Biological Journal of the Linnean Society, 2016, 117 (1), pp.44-57. ⟨10.1111/bij.12509⟩
Article dans une revue hal-02631026v1

Sequencing of the mitochondrial genome of the avocado lace bug Pseudacysta perseae (Heteroptera, Tingidae) using a genome skimming approach

Arthur Kocher , Eric Guilbert , Emeline Lhuillier , Jérôme Murienne
Comptes Rendus Biologies, 2015, 338 (3), pp.149-160. ⟨10.1016/j.crvi.2014.12.004⟩
Article dans une revue hal-02636710v1

PCR-free shotgun sequencing of the stone loach mitochondrial genome (Barbatula barbatula)

Jérôme Murienne , Céline Jeziorski , Hélène Holota , Eric Coissac , Simon Blanchet
Mitochondrial DNA Part A, 2015, 27 (6), pp.4211-4212. ⟨10.3109/19401736.2015.1022744⟩
Article dans une revue hal-01601477v1

Complete mitochondrial genome of the gray mouse lemur, Microcebus murinus (Primates, Cheirogaleidae)

Emilie Lecompte , Brigitte Crouau-Roy , Fabienne Aujard , Hélène Holota , Jérôme Murienne
Mitochondrial DNA Part A, 2015, 27 (5), pp.3514-3516. ⟨10.3109/19401736.2015.1074196⟩
Article dans une revue mnhn-02291852v1
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Online database for mosquito (Diptera, Culicidae) occurrence records in French Guiana

Stanislas Talaga , Jérôme Murienne , Alain Dejean , Céline Leroy
Zookeys, 2015, 532, pp.107-115. ⟨10.3897/zookeys.532.6176⟩
Article dans une revue hal-02095594v1

Shotgun assembly of the assassin bug Brontostoma colossus mitochondrial genome (Heteroptera, Reduviidae)

Arthur Kocher , Maria Kamilari , Emeline Lhuillier , Eric Coissac , Julie Péneau
Gene, 2014, 552 (1), pp.184-194. ⟨10.1016/j.gene.2014.09.033⟩
Article dans une revue hal-02638880v1

Phylogeny of Cidaroida (Echinodermata: Echinoidea) based on mitochondrial and nuclear markers

Olivier Brosseau , Jérôme Murienne , Delphine Pichon , Nicolas Vidal , Marc Eléaume
Organisms Diversity and Evolution, 2012, 12 (2), pp.155-165. ⟨10.1007/s13127-012-0087-1⟩
Article dans une revue hal-02923006v1

The evolutionary history of capital-breeding moths through the lens of wild silkmoths (Saturniidae) phylogenomics

Rodolphe Rougerie , Astrid Cruaud , Pierre Arnal , Liliana Ballesteros-Mejia , Fabien L. Condamine
23rd International Conference of the European Society for Lepidopterology & 11th Forum Herbulot, European Society for Lepidopterology (ESL), Sep 2023, Orléans, France
Communication dans un congrès hal-04236301v1

ACTIAS-WF workflow for a better account of biodiversity

Liliana Ballesteros-Mejia , Rodolphe Rougerie , Carlos Lopez-Vaamonde , Thibaud Decaens , J.-Y. Rasplus
8th International Barcode of Life Conference, Jun 2019, Trondheim, Norway
Communication dans un congrès hal-03655936v1

From DNA-barcode libraries to global macroecology and macroevolutionary studies in insects

Rodolphe Rougerie , Liliana Ballesteros-Mejia , Pierre Arnal , Thibaud Decaens , Jean Yves Rasplus
8th International Barcode of Life Conference, Jun 2019, Trondheim, Norway
Communication dans un congrès hal-03655937v1

Écologie tropicale : de l'ombre à la lumière

Swanni Tatiana Alvarado , Christopher Baraloto , Laurent Bremond , François Bretagnolle , Elise Buisson
P.-M. Forget, M. Hossaert-McKey & O. Poncy. Le Cherche midi; CNRS, pp.192, 2015, 978-2-7491-4075-9
Ouvrages hal-01118878v1
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Advances and prospects of environmental DNA in neotropical rainforests

Lucie Zinger , Julian Donald , Sébastien Brosse , Mailyn Adriana Gonzalez , Amaia Iribar
Tropical Ecosystems in the 21st Century, 62, Academic Press, pp.331-373, 2020, Advances in Ecological Research, 978-0-12-821134-2. ⟨10.1016/bs.aecr.2020.01.001⟩
Chapitre d'ouvrage hal-02909735v1