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Détection de spots avec sélection d’échelle automatique et seuillage adaptatif en microscopie de fluorescence

 Antoine Basset , Jérôme Boulanger , Patrick Bouthemy , Charles Kervrann , Jean Salamero
Traitement du Signal, 2015, 32 (2-3), pp.24. ⟨10.3166/ts.32.287-310⟩
Article dans une revue hal-01246429v1

Detection and estimation of membrane diffusion during exocytosis in TIRFM image sequences

 Antoine Basset , Patrick Bouthemy , Jérôme Boulanger , Francois Waharte , Charles Kervrann , et al.
IEEE International Symposium on Biomedical Imaging, IEEE, Apr 2015, New-York, United States. pp.4, ⟨10.1109/ISBI.2015.7163968⟩
Communication dans un congrès hal-01246448v1

Optimal spatial adaptation for patch-based image denoising

 Charles Kervrann , Jérôme Boulanger
IEEE Transactions on Image Processing, 2006, 15 (10), pp.2866-2878
Article dans une revue hal-02665807v1
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Modélisation et estimation de la diffusion de protéines à l’exocytose dans des séquences d’images de microscopie TIRF

 Antoine Basset , Patrick Bouthemy , Jérôme Boulanger , François Waharte , Jean Salamero , et al.
Reconnaissance des Formes et l'Intelligence Artificielle (RFIA'16), Association Française de Reconnaissance et d'Interprétation des Formes (AFRIF), Association Française d'Intelligence Artificielle (AFIA), Jun 2016, Clermont-Ferrand, France. pp.1-8
Communication dans un congrès hal-01416868v1

Non-smooth convex optimization for an efficient reconstruction in structured illumination microscopy

 Jérôme Boulanger , Nelly Pustelnik , Laurent Condat
ISBI 2014 - IEEE International Symposium on Biomedical Imaging, Apr 2014, Beijing, China. pp.n/c
Communication dans un congrès hal-00954323v1
Image document

Space-time adaptation for patch-based image sequence restoration

 Jérôme Boulanger , Charles Kervrann , Patrick Bouthemy
IEEE Transactions on Pattern Analysis and Machine Intelligence, 2007, 29 (6), pp.1096-1102. ⟨10.1109/TPAMI.2007.1064⟩
Article dans une revue hal-02661591v1
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Simulation and estimation of fluorescence microscopy image sequences for intracellular dynamics and trafficking

 Jérôme Boulanger , Charles Kervrann , Patrick Bouthemy
MICCAI'06, Oct 2006, Copenhagen, Denmark
Communication dans un congrès hal-02753571v1
Image document

Local adaptivity to variable smoothness for exemplar-based image denoising and representation

 Charles Kervrann , Jérôme Boulanger
[Research Report] PI 1733, 2005, pp.60
Rapport inria-00000166v1

Change detection methods in fluorescence live cell imaging for sub-cellular trafficking analysis

 Charles Kervrann , Jérôme Boulanger , Anatole Chessel , Bertrand Cinquin , Jean Salamero
BioImage Informatics II, Janelia Farm - Howard Hugues Medical Institute, Sep 2011, Ashburn VA, United States
Communication dans un congrès hal-00651919v1
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Estimation of the flow of particles within a partition of the image domain in fluorescence video-microscopy

 Thierry Pécot , Jérôme Boulanger , Charles Kervrann , Patrick Bouthemy , Jean Salamero
ISBI - 11th IEEE International Symposium On Biomedical Imaging : from nano to macro - 2014, Apr 2014, Beijing, China
Communication dans un congrès hal-00936063v1
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Bayesian non-local means filter, image redundancy and adaptive dictionaries for noise removal

 Charles Kervrann , Jérôme Boulanger , Pierrick Coupé
SSVM'07 Proceedings of the 1st international conference on Scale space and variational methods in computer vision, May 2007, Ischia, Italy. pp.520-532
Communication dans un congrès hal-00645444v1

Network tomography for trafficking simulation and analysis in fluorescence microscopy imaging

 Thierry Pecot , Jérôme Boulanger , Charles Kervrann , Patrick Bouthemy
2007 4.IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Apr 2007, Washington, United States. ⟨10.1109/ISBI.2007.356840⟩
Communication dans un congrès hal-02757322v1
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Lifetime MAP reconstruction in frequency-domain fluorescence lifetime imaging microscopy

 Philippe Roudot , Charles Kervrann , François Waharte , Jérôme Boulanger
IEEE International Conference on Image Processing, ICIP 2012, Oct 2012, Orlando, FL, United States
Communication dans un congrès hal-00763803v1

Noise modeling for intensified camera in fluorescence imaging: application to image denoising

 Philippe Roudot , Charles Kervrann , Jérôme Boulanger , François Waharte
ISBI - IEEE International Symposium on Biomedical Imaging, Apr 2013, San-Francisco, United States. pp.600-603, ⟨10.1109/ISBI.2013.6556546⟩
Communication dans un congrès hal-00931360v1
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Rho-Kinase Planar Polarization at Tissue Boundaries Depends on Phospho-regulation of Membrane Residence Time

 Clara Sidor , Tim J Stevens , Li Jin , Jérôme Boulanger , Katja Röper
Developmental Cell, 2020, 52 (3), pp.364-378.e7. ⟨10.1016/j.devcel.2019.12.003⟩
Article dans une revue hal-03170603v1

Spot detection in light microscopy images with automatic scale selection and self-adaptive thresholding

 Antoine Basset , Jérôme Boulanger , Patrick Bouthemy , Charles Kervrann , Jean Salamero
BioImage Informatics, Oct 2014, Leuven, Belgium
Communication dans un congrès hal-01103551v1

A Rab11A/myosin Vb/Rab11-FIP2 complex frames two late recycling steps of langerin from the ERC to the plasma membrane

 Alexandre Gidon , Sabine Bardin , Bertrand Cinquin , Jérôme Boulanger , François Waharte , et al.
Traffic, 2012, 13 (6), pp.815-833. ⟨10.1111/j.1600-0854.2012.01354.x⟩
Article dans une revue hal-00782005v1
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An extended model of vesicle fusion at the plasma membrane to estimate protein lateral diffusion from TIRF microscopy images

 Antoine Basset , Patrick Bouthemy , Jérôme Boulanger , François Waharte , Jean Salamero , et al.
BMC Bioinformatics, 2017, 18 (1), pp.352. ⟨10.1186/s12859-017-1765-y⟩
Article dans une revue hal-01561310v2

A detection-based framework for the analysis of recycling in TIRF microscopy

 Anatole Chessel , Bertrand Cinquin , Sabine Bardin , Jérôme Boulanger , Jean Salamero , et al.
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2010), IEEE Signal Processing Society, Apr 2010, Rotterdam, Netherlands. pp.1281-1284, ⟨10.1109/ISBI.2010.5490230⟩
Communication dans un congrès inria-00541102v1
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A Patch-Based Method for Repetitive and Transient Event Detection in Fluorescence Imaging

 Jérôme Boulanger , Alexandre Gidon , Charles Kervrann , Jean Salamero
PLoS ONE, 2010, 5 (10), pp.e13190. ⟨10.1371/journal.pone.0013190⟩
Article dans une revue inria-00541072v1

Local adaptivity to variable smoothness for exemplar-based Image regularization and representation

 Charles Kervrann , Jérôme Boulanger
International Journal of Computer Vision, 2008, 2008 (79), pp.45-69. ⟨10.1007/s11263-007-0096-2⟩
Article dans une revue istex hal-02668668v1
Image document

A simulation and estimation framework for intracellular dynamics and trafficking in video-microscopy and fluorescence imagery

 Jérôme Boulanger , Charles Kervrann , Patrick Bouthemy
Medical Image Analysis, 2008, 13, 132-142Video-microscopy Fluorescence Cellular biology Image sequence modeling Simulation Estimation
Article dans une revue hal-00794917v1
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Non-parametric regression for patch-based fluorescence microscopy image sequence denoising

 Jérôme Boulanger , Charles Kervrann , Jean Salamero , Jean-Baptiste Sibarita , Patrick Bouthemy
[Research Report] RR-6651, INRIA. 2008, pp.34
Rapport inria-00322321v1

A simulation and estimation framework for intracellular dynamics and trafficking in video-microscopy and fluorescence imagery

 Jérôme Boulanger , Charles Kervrann , Patrick Bouthemy
Medical Image Analysis, 2009, 13 (1), pp.132-142. ⟨10.1016/j.media.2008.06.017⟩
Article dans une revue hal-02662557v1

A quantitative approach for space-time membrane trafficking orientation

 Thierry Pécot , Jérôme Boulanger , Patrick Bouthemy , Sabine Bardin , Jean Salamero , et al.
Quantitative BioImaging, Jan 2015, Paris, France
Communication dans un congrès hal-01103553v1
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QuantEv: quantifying the spatial distribution of intracellular events

 Thierry Pécot , Liu Zengzhen , Jérôme Boulanger , Jean Salamero , Charles Kervrann
2017
Pré-publication, Document de travail hal-01575913v1

Condensed Mitotic Chromosome Structure at Nanometer Resolution Using PALM and EGFP- Histones

 Atsushi Matsuda , Lin Shao , Jérôme Boulanger , Charles Kervrann , Peter M. Carlton , et al.
PLoS ONE, 2010, 5 (9), pp.e12768. ⟨10.1371/journal.pone.0012768⟩
Article dans une revue inria-00541020v1

Fast high-resolution 3D total internal reflection fluorescence microscopy by incidence angle scanning and azimuthal averaging.

 Jérôme Boulanger , Charles Gueudry , Daniel Münch , Bertrand Cinquin , Perrine Paul-Gilloteaux , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (48), pp.17164-9
Article dans une revue hal-01133826v1
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Sélection d'échelle automatique précise et seuillage localement adapté pour la segmentation de vésicules en microscopie TIRF

 Antoine Basset , Jérôme Boulanger , Patrick Bouthemy , Charles Kervrann , Jean Salamero
Reconnaissance de Formes et Intelligence Artificielle (RFIA) 2014, Jun 2014, Rouen, France
Communication dans un congrès hal-00988759v1
Image document

Network tomography for tra cking simulation and analysis in fluorescence microscopy imaging

 Thierry Pécot , Jérôme Boulanger , Charles Kervrann , Patrick Bouthemy
ISBI - IEEE International Symposium On Biomedical Imaging : from nano to macro - 2007, Apr 2007, Washington D.C., United States
Communication dans un congrès hal-00919651v1
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