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Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploids

 Veronique Chague , Jérémy Just , Imen Mestiri , Sandrine Balzergue , Anne-Marie A.-M. Tanguy , et al.
New Phytologist, 2010, 187 (4), pp.1181-1194. ⟨10.1111/j.1469-8137.2010.03339.x⟩
Article dans une revue hal-02664349v1
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A miR172 target-deficient AP2-like gene correlates with the double flower phenotype in roses

 Léa François , Marion Verdenaud , Xiaopeng Fu , Darcy Ruleman , Annick Dubois , et al.
Scientific Reports, 2018, 8, pp.12912. ⟨10.1038/s41598-018-30918-4⟩
Article dans une revue hal-02389731v1

Dynamics and Differential Proliferation of Transposable Elements During the Evolution of the B and A Genomes of Wheat

 Mathieu Charles , Harry H. Belcram , Jérémy Just , Cécile C. Huneau , Agnès Viollet , et al.
Genetics, 2008, 180 (2), pp.1071-1086
Article dans une revue hal-02654898v1

Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

 Boulos Chalhoub , France Denoeud , Shengyi Liu , Isobel A. P. Parkin , Haibao Tang , et al.
Science, 2014, 345 (6199), pp.950-953. ⟨10.1126/science.1253435⟩
Article dans une revue hal-01208705v1

Prevalence of gene expression additivity in genetically stable wheat allohexaploids

 Houda Chelaifa-Ammari , Veronique Chague , Smahane Chalabi , Imen Mestiri , Dominique Arnaud , et al.
New Phytologist, 2012, 197 (3), pp.730 - 736. ⟨10.1111/nph.12108⟩
Article dans une revue hal-01208638v1
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Single and multiple gene knockouts by CRISPR–Cas9 in maize

 Nicolas M Doll , Laurine Gilles , Marie-France Gerentes , Christelle Richard , Jérémy Just , et al.
Plant Cell Reports, 2019, 38 (4), pp.487-501. ⟨10.1007/s00299-019-02378-1⟩
Article dans une revue hal-02349639v1

The development of a high-density genetic map significantly improves the quality of reference genome assemblies for rose

 Shubin Li , Guoqian Yang , Shuhua Yang , Jérémy Just , Huijun Yan , et al.
Scientific Reports, 2019, 9 (1), ⟨10.1038/s41598-019-42428-y⟩
Article dans une revue hal-02541884v1

Evaluation of genome and base editing tools in maize protoplasts

 Yannick Fierlej , Nathanaël Jacquier , Loïc Guille , Jérémy Just , Emilie Montes , et al.
5th European Maize Meeting, Jun 2023, Bologne (Italy), Italy
Communication dans un congrès hal-04206449v1
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Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

 Isobel A. P. Parkin , Chushin Koh , Haibao Tang , Stephen J. Robinson , Sateesh Kagale , et al.
Genome Biology, 2014, 15 (6), 18 p. ⟨10.1186/gb-2014-15-6-r77⟩
Article dans une revue hal-02639882v1
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The rosa chinensis cv. viridiflora phyllody phenotype Is associated with misexpression of flower organ identity genes

 Huijun Yan , Hao Zhang , Qigang Wang , Hongying Jian , Xianqin Qiu , et al.
Frontiers in Plant Science, 2016, 7, ⟨10.3389/fpls.2016.00996⟩
Article dans une revue hal-02640198v1
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GénoPlante-Info (GPI): a collection of databases and bioinformatics resources for plant genomics

 Dylan Samson , F. Legeai , Emmanuelle Karsenty , Sébastien Reboux , J.B. Veyrieras , et al.
Nucleic Acids Research, 2003, 31 (1), pp.179-182. ⟨10.1093/nar/gkg060⟩
Article dans une revue hal-02682546v1
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Impact of transposable elements on the organization and function of allopolyploid genomes

 Christian Parisod , Karine Alix , Jérémy Just , Maud Petit , Véronique Sarilar , et al.
New Phytologist, 2010, 186 (1), pp.37-45. ⟨10.1111/j.1469-8137.2009.03096.x⟩
Article dans une revue hal-01203938v1
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Sixteen cytosolic glutamine synthetase genes identified in the Brassica napus L. genome are differentially regulated depending on nitrogen regimes and leaf senescence

 Mathilde Orsel Baldwin , Michaël Moison , Vanessa Clouet , Justine Thomas , Françoise Leprince , et al.
Journal of Experimental Botany, 2014, 65 (14), pp.3927-3947. ⟨10.1093/jxb/eru041⟩
Article dans une revue hal-01204074v1
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The molecular signatures of compatible and incompatible pollination

 Chie Kodera , Jérémy Just , Martine da Rocha , Antoine Larrieu , Lucie Riglet , et al.
2020
Pré-publication, Document de travail hal-02992075v1
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Rosa spp.

 Jérémy Just , Mohammed Bendahmane
Trends in Genetics, 2020, 36 (2), pp.146-147. ⟨10.1016/j.tig.2019.11.002⟩
Article dans une revue hal-03153174v1
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BOSC 2023, the 24th annual Bioinformatics Open Source Conference [editorial]

 Nomi Harris , Christopher Fields , Karsten Hokamp , Jérémy Just , Radhika Khetani , et al.
F1000Research, 2023, 12, pp.1568. ⟨10.12688/f1000research.143015.1⟩
Article dans une revue hal-04360680v1

Towards the rose genome sequence and its use in research and breeding

 Fabrice Foucher , Laurence Hibrand-Saint Oyant , Latifa Hamama , Soulaiman Sakr , H. Nybom , et al.
VI International Symposium on Rose Research and Cultivation, 2015, Hanovre, Germany. pp.167-175
Communication dans un congrès hal-01393815v1

Outils chimiques, bio-informatiques et bases de données en écologie chimique

 Nicolas Barthes , Jean Claude Caissard , Jérémy Just , Xavier Fernandez
Écologie chimique, , 2017, 978-1-78405-186-0
Chapitre d'ouvrage hal-03228447v1
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Cell layer-specific expression of the B-class MADS-box gene PhDEF drives petal tube or limb development in petunia flowers

 M. Chopy , Q. Cavallini-Speisser , P. Chambrier , P. Morel , J. Just , et al.
2021
Pré-publication, Document de travail hal-03405575v1

A Dominant Point Mutation in a RINGv E3 Ubiquitin Ligase Homoeologous Gene Leads to Cleistogamy in Brassica napus

 Yun-Hai Lu , Dominique Arnaud , Harry Belcram , Cyril Falentin , Patricia Rouault , et al.
The Plant cell, 2012, 24 (12), pp.4875 - 4891. ⟨10.1105/tpc.112.104315⟩
Article dans une revue hal-01208649v1
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Duplication and partitioning in evolution and function of homoeologous Q loci governing domestication characters in polyploid wheat

 Zengcui Zhanga , Harry H. Belcram , Piotr Gornickic , Mathieu Charles , Jérémy Just , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (46), pp.18737 - 18742. ⟨10.1073/pnas.1110552108⟩
Article dans une revue hal-02650358v1
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Transcriptomics at Maize Embryo/Endosperm Interfaces Identifies a Transcriptionally Distinct Endosperm Subdomain Adjacent to the Embryo Scutellum

 Nicolas Doll , Jérémy Just , Véronique Brunaud , José Caïus , Aurélie Grimault , et al.
The Plant cell, 2020, 32 (4), pp.833-852. ⟨10.1105/tpc.19.00756⟩
Article dans une revue hal-03065555v1

Characteristic of the Endosperm Adjacent to the Embryo Scutellum (EAS) of Maize

 Nicolas Doll , Yannick Fierlej , Jérémy Just , Veronique Brunaud , José Caius , et al.
4th European Maize Meeting, Sep 2021, Regensburg, Germany
Communication dans un congrès hal-03354711v1
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The Rosa genome provides new insights into the domestication of modern roses

 Olivier Raymond , Jerome Gouzy , Jérémy Just , Hélène Badouin , Marion Verdenaud , et al.
Nature Genetics, 2018, 50 (6), pp.772-777. ⟨10.1038/s41588-018-0110-3⟩
Article dans une revue hal-01798003v1
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