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Comparative analysis of viral RNA signatures on different RIG-I-like receptors.

 Raul y Sanchez David , Chantal Combredet , Odile Sismeiro , Marie Dillies , Bernd Jagla , et al.
eLife, 2016, 5, pp.e11275. ⟨10.7554/eLife.11275⟩
Article dans une revue hal-01483406v1
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Distinct Transcriptional Signatures of Bone Marrow-Derived C57BL/6 and DBA/2 Dendritic Leucocytes Hosting Live Leishmania amazonensis Amastigotes

 Emilie Giraud , Hervé Lecoeur , Guillaume Soubigou , Jean-Yves Coppée , Geneviève Milon , et al.
PLoS Neglected Tropical Diseases, 2012, 6 (12), pp.e1980. ⟨10.1371/journal.pntd.0001980⟩
Article dans une revue pasteur-02749829v1
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Identified members of the Streptomyces lividans AdpA regulon involved in differentiation and secondary metabolism.

 Aurélie Guyet , Nadia Benaroudj , Caroline Proux , Myriam Gominet , Jean-Yves Coppée , et al.
BMC Microbiology, 2014, 14 (1), pp.81. ⟨10.1186/1471-2180-14-81⟩
Article dans une revue pasteur-00979918v1

Small RNA deep-sequencing analyses reveal a new regulator of virulence in Agrobacterium fabrum C58

 Magali Dequivre , Benjamin Diel , Camille Villard , Odile Sismeiro , Maxime Durot , et al.
Molecular Plant-Microbe Interactions, 2015, 28 (5), pp.580-589. ⟨10.1094/MPMI-12-14-0380-FI⟩
Article dans une revue hal-01205620v1
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Dynamic RNA profiling in Plasmodium falciparum synchronized blood stages exposed to lethal doses of artesunate.

 Onguma Natalang , Emmanuel Bischoff , Guillaume Deplaine , Caroline Proux , Marie-Agnès Dillies , et al.
BMC Genomics, 2008, 9 (1), pp.388. ⟨10.1186/1471-2164-9-388⟩
Article dans une revue pasteur-01472184v1
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Role of the BAHD1 Chromatin-Repressive Complex in Placental Development and Regulation of Steroid Metabolism

 Goran Lakisic , Alice Lebreton , Renaud Pourpre , Olivia Wendling , Emanuele Libertini , et al.
PLoS Genetics, 2016, 12 (3), pp.e1005898. ⟨10.1371/journal.pgen.1005898⟩
Article dans une revue hal-01350966v1
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Repressor activity of the RpoS/σS-dependent RNA polymerase requires DNA binding

 Corinne Levi-Meyrueis , Véronique Monteil , Odile Sismeiro , Marie-Agnès Dillies , Annie Kolb , et al.
Nucleic Acids Research, 2015, 43 (3), pp.1456 - 1468. ⟨10.1093/nar/gku1379⟩
Article dans une revue pasteur-01370752v1

Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence.

 Tobias Sahr , Christophe Rusniok , Delphine Dervins-Ravault , Odile Sismeiro , Jean-Yves Coppee , et al.
RNA Biology, 2012, 9 (4), pp.503-519. ⟨10.4161/rna.20270⟩
Article dans une revue pasteur-01338351v1
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RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans.

 Sanjiveeni Dhamgaye , Maria Bernard , Gaëlle Lelandais , Odile Sismeiro , Sophie Lemoine , et al.
BMC Genomics, 2012, 13 (1), pp.396. ⟨10.1186/1471-2164-13-396⟩
Article dans une revue inserm-00733893v1
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Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)

 Simon M Dittami , Caroline Proux , Sylvie Rousvoal , Akira F Peters , J Mark Cock , et al.
BMC Molecular Biology, 2011, 12, pp.2. ⟨10.1186/1471-2199-12-2⟩
Article dans une revue hal-00925432v1

Overexpression of proinflammatory TLR-2-signalling lipoproteins in hypervirulent mycobacterial variants

 Anne-Laure Roux , Aurélie Ray , Alexandre Pawlik , Halima Medjahed , Gilles Etienne , et al.
Cellular Microbiology, 2011, 13 (5), pp.692-704. ⟨10.1111/j.1462-5822.2010.01565.x⟩
Article dans une revue pasteur-02618829v1
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Field-based evidence of fast and global increase of Plasmodium falciparum drug-resistance by DNA-microarrays and PCR/RFLP in Niger

 Maman Laminou Ibrahim , Nicolas Steenkeste , Nimol Khim , Adam Hadiza Hassane , Lassana Konaté , et al.
Malaria Journal, 2009, 8 (1), pp.32. ⟨10.1186/1475-2875-8-32⟩
Article dans une revue hal-03736863v1
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On the origin of leprosy.

 Marc Monot , Nadine Honoré , Thierry Garnier , Romulo Araoz , Jean-Yves Coppée , et al.
Science, 2005, 308 (5724), pp.1040-2. ⟨10.1126/science/1109759⟩
Article dans une revue pasteur-00204117v1
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RNA Sequencing Reveals Widespread Transcription of Natural Antisense RNAs in Entamoeba Species

 Damien Mornico , Chung-Chau Hon , Mikael Koutero , Christian Weber , Jean-Yves J.-Y. Coppee , et al.
Microorganisms, 2022, 10 (2), pp.396. ⟨10.3390/microorganisms10020396⟩
Article dans une revue pasteur-03682595v1
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Genomic determinants for initiation and length of natural antisense transcripts in Entamoeba histolytica

 Damien Mornico , Chung-Chau Hon , Mikael Koutero , Christian Weber , Jean-Yves Coppee , et al.
Scientific Reports, 2020, 10 (1), pp.20190. ⟨10.1038/s41598-020-77010-4⟩
Article dans une revue pasteur-03228542v1
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Intron retention-dependent gene regulation in Cryptococcus neoformans

 Sara Gonzalez-Hilarion , Damien Paulet , Kyung-Tae Lee , Chung-Chau Hon , Pierre Lechat , et al.
Scientific Reports, 2016, 6 (1), pp.32252. ⟨10.1038/srep32252⟩
Article dans une revue pasteur-02861773v1
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Role of Hydrophobins in Aspergillus fumigatus

 Isabel Valsecchi , Vincent Dupres , Emmanuel Stephen-Victor , J. Iñaki Guijarro , John Gibbons , et al.
Journal of Fungi, 2017, 4 (1), pp.2. ⟨10.3390/jof4010002⟩
Article dans une revue pasteur-01673574v1
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Influenza virus infection induces widespread alterations of host cell splicing

 Usama Ashraf , Clara Benoit-Pilven , Vincent Navratil , Cécile Ligneau , Guillaume Fournier , et al.
NAR Genomics and Bioinformatics, 2020, 2 (4), ⟨10.1093/nargab/lqaa095⟩
Article dans une revue hal-03021806v1

Adaptation in Toxic Environments: Arsenic Genomic Islands in the Bacterial Genus Thiomonas

 Kelle Freel , Martin Krueger , Julien Farasin , Céline Brochier-Armanet , Valérie Barbe , et al.
PLoS ONE, 2015, 10 (9), pp.0139011. ⟨10.1371/journal.pone.0139011⟩
Article dans une revue cea-01825879v1
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The transcriptional response of pathogenic Leptospira to peroxide reveals new defenses against infection-related oxidative stress

 Crispin Zavala-Alvarado , Odile Sismeiro , Rachel Legendre , Hugo Varet , Giovanni Bussotti , et al.
PLoS Pathogens, 2020, 16 (10), pp.e1008904. ⟨10.1371/journal.ppat.1008904⟩
Article dans une revue pasteur-02970798v1

Identification and characterization of the genetic changes responsible for the characteristic smooth-to-rough morphotype alterations of clinically persistent Mycobacterium abscessus

 Alexandre Pawlik , Guillaume Garnier , Mickael Orgeur , Pin Tong , Amanda Lohan , et al.
Molecular Microbiology, 2013, 90 (3), pp.612-629. ⟨10.1111/mmi.12387⟩
Article dans une revue pasteur-02618774v1
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SARTools: A DESeq2-and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data

 Hugo Varet , Loraine Brillet-Guéguen , Jean-Yves Coppée , Marie-Agnès Dillies
PLoS ONE, 2016, 11 (6), pp.e0157022. ⟨10.1371/journal.pone.0157022⟩
Article dans une revue hal-01344179v1

The global regulator CodY regulates toxin gene expression in Bacillus anthracis and is required for full virulence.

 Willem van Schaik , Alice Château , Marie-Agnès Dillies , Jean-Yves Coppée , Abraham L Sonenshein , et al.
Infection and Immunity, 2009, 77 (10), pp.4437-45. ⟨10.1128/IAI.00716-09⟩
Article dans une revue pasteur-00512124v1

Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA.

 Eliane Milohanic , Philippe Glaser , Jean-Yves Coppee , Lionel Frangeul , Yolanda Vega , et al.
Molecular Microbiology, 2003, 47 (6), pp.1613-25. ⟨10.1046/j.1365-2958.2003.03413.x⟩
Article dans une revue hal-02682659v1
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Multiple controls affect arsenite oxidase gene expression in Herminiimonas arsenicoxydans.

 Sandrine Koechler , Jessica Cleiss-Arnold , Caroline Proux , Odile Sismeiro , Marie-Agnès Dillies , et al.
BMC Microbiology, 2010, 10 (1), pp.53. ⟨10.1186/1471-2180-10-53⟩
Article dans une revue pasteur-00670630v1
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Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid

 An van den Bossche , Hugo Varet , Amandine Sury , Odile Sismeiro , Rachel Legendre , et al.
Tuberculosis, 2019, 117, pp.18-23. ⟨10.1016/j.tube.2019.05.002⟩
Article dans une revue pasteur-02562412v1
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The oxidative stress response of pathogenic Leptospira is controlled by two peroxide stress regulators which putatively cooperate in controlling virulence

 Crispin Zavala-Alvarado , Samuel G. Huete , Antony T. Vincent , Odile Sismeiro , Rachel Legendre , et al.
PLoS Pathogens, 2021, 17 (12), pp.e1009087. ⟨10.1371/journal.ppat.1009087⟩
Article dans une revue pasteur-03464148v1

A putative regulatory genetic locus modulates virulence in the pathogen Leptospira interrogans

 Azad Eshgi , Jérôme Becam , Ambroise Lambert , Odile Sismeiro , Marie-Agnès Dillies , et al.
Infection and Immunity, 2014, 82 (6), pp.2542-2552. ⟨10.1128/IAI.01803-14⟩
Article dans une revue hal-01163058v1
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Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression

 Marie-Laure Rosso , Sylvie Chauvaux , Rodrigue Dessein , Caroline Laurans , Lionel Frangeul , et al.
BMC Microbiology, 2008, 8, pp.211. ⟨10.1186/1471-2180-8-211⟩
Article dans une revue inserm-02064904v1

Induction of the Cpx Envelope Stress Pathway Contributes to Escherichia coli Tolerance to Antimicrobial Peptides

 B. Audrain , L. Ferrieres , A. Zairi , G. Soubigou , C. Dobson , et al.
Applied and Environmental Microbiology, 2013, 79 (24), pp.7770 - 7779. ⟨10.1128/AEM.02593-13⟩
Article dans une revue pasteur-01385433v1
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