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Number of documents

130

Jean-Frédéric Gerbeau


Current positions

  • Deputy CEO for Science (Directeur Général délégué à la Science), Inria, since 2018.
  • Senior researcher (Directeur de Recherche), Inria, since 2005.
  • Part-time professor (Professeur chargé de cours), Ecole Polytechnique, since 2016.

Scientific interests

  • Mathematical modeling, Numerical Analysis of Partial Differential Equations, Scientific computing
  • Interaction data / simulation, model reduction
  • Modeling and simulation of the cardiovascular system (fluid-structure interaction, hemodynamics, cardiac electrophysiology)
  • Modeling and simulation in magnetohydrodynamics of liquid metals and free surface flows

Editorial activities

Honors

  • Alcan Prize 2010 (with T. Lelièvre), awarded by the French Academy of Sciences.
  • Pierre Faurre Prize 2008, awarded by the French Academy of Sciences.
  • CS Prize 2002 in Scientific computing (with C. Le Bris and T. Lelièvre), awarded by Communications & Systems (ex-CISI Prize)

 


Journal articles70 documents

  • Felipe Galarce, Jean-Frédéric Gerbeau, Damiano Lombardi, Olga Mula. Fast reconstruction of 3D blood flows from Doppler ultrasound images and reduced models. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2021, ⟨10.1016/j.cma.2020.113559⟩. ⟨hal-02403686⟩
  • Julien Ratelade, Nicholas Klug, Damiano Lombardi, Monara Kaelle Servulo Cruz Angelim, Fabrice Dabertrand, et al.. Reducing Hypermuscularization of the Transitional Segment between Arterioles and Capillaries Protects Against Spontaneous Intracerebral Hemorrhage. Circulation, American Heart Association, 2020, 141 (25), pp.2078-2094. ⟨10.1161/CIRCULATIONAHA.119.040963⟩. ⟨inserm-02511921⟩
  • Alexandre This, Hernan Morales, Odile Bonnefous, Miguel Angel Fernández, Jean-Frédéric Gerbeau. A pipeline for image based intracardiac CFD modeling and application to the evaluation of the PISA method. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2020, 358, pp.112627. ⟨10.1016/j.cma.2019.112627⟩. ⟨hal-02142416⟩
  • Alexandre This, Ludovic Boilevin-Kayl, Miguel Angel Fernández, Jean-Frédéric Gerbeau. Augmented Resistive Immersed Surfaces valve model for the simulation of cardiac hemodynamics with isovolumetric phases. International Journal for Numerical Methods in Biomedical Engineering, John Wiley and Sons, 2020, 36 (3), pp.e3223. ⟨10.1002/cnm.3223⟩. ⟨hal-01944798v2⟩
  • Ludovic Boilevin-Kayl, Miguel Angel Fernández, Jean-Frédéric Gerbeau. A loosely coupled scheme for fictitious domain approximations of fluid-structure interaction problems with immersed thin-walled structures. SIAM Journal on Scientific Computing, Society for Industrial and Applied Mathematics, 2019, 41 (2), pp.351-374. ⟨10.1137/18M1192779⟩. ⟨hal-01811290v2⟩
  • Ludovic Boilevin-Kayl, Miguel Angel Fernández, Jean-Frédéric Gerbeau. Numerical methods for immersed FSI with thin-walled structures. Computers and Fluids, Elsevier, 2019, 179, pp.744-763. ⟨10.1016/j.compfluid.2018.05.024⟩. ⟨hal-01704575v2⟩
  • Annabelle Collin, Sébastien Imperiale, Philippe Moireau, Jean-Frédéric Gerbeau, Dominique Chapelle. Apprehending the effects of mechanical deformations in cardiac electrophysiology: A homogenization approach. Mathematical Models and Methods in Applied Sciences, World Scientific Publishing, 2019, 29 (13), pp.2377-2417. ⟨10.1142/S0218202519500490⟩. ⟨hal-02267941v2⟩
  • Fabien Raphel, Muriel Boulakia, Nejib Zemzemi, Yves Coudière, Jean-Michel Guillon, et al.. Identification of ion currents components generating field potential recorded in MEA from hiPSC-CM. IEEE Transactions on Biomedical Engineering, Institute of Electrical and Electronics Engineers, 2018, 65 (6), pp.1311-1319. ⟨10.1109/TBME.2017.2748798⟩. ⟨hal-01570341⟩
  • Emanuela Abbate, Muriel Boulakia, Yves Coudière, Jean-Frédéric Gerbeau, Philippe Zitoun, et al.. In silico assessment of the effects of various compounds in MEA/hiPSC-CM assays: Modelling and numerical simulations. Journal of Pharmacological and Toxicological Methods, Elsevier, 2018, 89, pp.59-72. ⟨hal-01562673⟩
  • Jean-Frédéric Gerbeau, Damiano Lombardi, Eliott Tixier. A moment-matching method to study the variability of phenomena described by partial differential equations. SIAM Journal on Scientific Computing, Society for Industrial and Applied Mathematics, 2018, 40 (3). ⟨hal-01391254⟩
  • Eliott Tixier, Fabien Raphel, Damiano Lombardi, Jean-Frédéric Gerbeau. Composite biomarkers derived from Micro-Electrode Array measurements and computer simulations improve the classification of drug-induced channel block. Frontiers in Physiology, Frontiers, 2018, 8 (1096), pp.1-30. ⟨10.3389/fphys.2017.01096⟩. ⟨hal-01570819v3⟩
  • Paul Barbone, Elisa Budyn, Adrian Buganza, De Suvranu, Ennis Daniel, et al.. Special Issue on Biological Systems. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2017, 314, pp.1 - 2. ⟨10.1016/j.cma.2016.11.027⟩. ⟨hal-01763090⟩
  • Eliott Tixier, Damiano Lombardi, Blanca Rodriguez, Jean-Frédéric Gerbeau. Modeling Variability in Cardiac Electrophysiology: A Moment Matching Approach. Journal of the Royal Society Interface, the Royal Society, 2017, 14 (133), ⟨10.1098/rsif.2017.0238⟩. ⟨hal-01570828⟩
  • Chloe Audebert, Petru Bucur, Mohamed Bekheit, Eric Vibert, Irene Vignon-Clementel, et al.. Kinetic scheme for arterial and venous blood flow, and application to partial hepatectomy modeling.. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2017, 314, pp.102-125. ⟨10.1016/j.cma.2016.07.009⟩. ⟨hal-01347500v2⟩
  • Matteo Aletti, Jean-Frédéric Gerbeau, Damiano Lombardi. A simplified fluid-structure model for arterial flow. Application to retinal hemodynamics. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2016, 306, pp.77-94. ⟨10.1016/j.cma.2016.03.044⟩. ⟨hal-01296940⟩
  • Elisa Schenone, Annabelle Collin, Jean-Frédéric Gerbeau. Numerical simulation of electrocardiograms for full cardiac cycles in healthy and pathological conditions. International Journal for Numerical Methods in Biomedical Engineering, John Wiley and Sons, 2016, 32 (5), ⟨10.1002/cnm.2744⟩. ⟨hal-01184744⟩
  • Grégory Arbia, Irene Vignon-Clementel, Tainyen Y. Hsia, Jean-Frédéric Gerbeau. Modified Navier-Stokes equations for the outflow boundary conditions in hemodynamics. European Journal of Mechanics - B/Fluids, Elsevier, 2016, 60, pp.175-188. ⟨10.1016/j.euromechflu.2016.06.001⟩. ⟨hal-01328501⟩
  • Icilio Cavero, Jean-Michel Guillon, Veronique Ballet, Mike Clements, Jean-Frédéric Gerbeau, et al.. Comprehensive in vitro Proarrhythmia Assay (CiPA): Pending issues for successful validation and implementation. Journal of Pharmacological and Toxicological Methods, Elsevier, 2016, 81, pp.21-36. ⟨10.1016/j.vascn.2016.05.012⟩. ⟨hal-01328481⟩
  • Jean-Frédéric Gerbeau, Damiano Lombardi, Elisa Schenone. Reduced order model in cardiac electrophysiology with approximated Lax pairs. Advances in Computational Mathematics, Springer Verlag, 2015, 41 (5), pp.1103-1130. ⟨10.1007/s10444-014-9393-9⟩. ⟨hal-01093488v2⟩
  • Matteo Aletti, Jean-Frédéric Gerbeau, Damiano Lombardi. Modeling autoregulation in three-dimensional simulations of retinal hemodynamics. Journal for Modeling in Ophthalmology, Kugler Publications, 2015, 1. ⟨hal-01242748⟩
  • Cesare Corrado, Jean-Frédéric Gerbeau, Philippe Moireau. Identification of weakly coupled multiphysics problems. Application to the inverse problem of electrocardiography. Journal of Computational Physics, Elsevier, 2015, 283, pp.271-298. ⟨10.1016/j.jcp.2014.11.041⟩. ⟨hal-01091751⟩
  • Sanjay Pant, Benoit Fabrèges, Jean-Frédéric Gerbeau, Irene Vignon-Clementel. A methodological paradigm for patient-specific multi-scale CFD simulations: from clinical measurements to parameter estimates for individual analysis. International Journal for Numerical Methods in Biomedical Engineering, John Wiley and Sons, 2014, 30 (12), pp.1614--1648. ⟨10.1002/cnm.2692⟩. ⟨hal-01093879⟩
  • Cristobal Bertoglio, David Barber, Nicholas Gaddum, Israel Valverde, Marcel Rutten, et al.. Identification of artery wall stiffness: in vitro validation and in vivo results of a data assimilation procedure applied to a 3D fluid-structure interaction model. Journal of Biomechanics, Elsevier, 2014, 47 (5), pp.1027-1034. ⟨10.1016/j.jbiomech.2013.12.029⟩. ⟨hal-00925902v2⟩
  • Romain Guibert, Kristin Mcleod, Alfonso Caiazzo, Tommaso Mansi, Miguel Angel Fernández, et al.. Group-wise Construction of Reduced Models for Understanding and Characterization of Pulmonary Blood Flows from Medical Images. Medical Image Analysis, Elsevier, 2014, 18 (1), pp.63-82. ⟨10.1016/j.media.2013.09.003⟩. ⟨hal-00874545⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau, Saverio Smaldone. Explicit coupling schemes for a fluid-fluid interaction problem arising in hemodynamics. SIAM Journal on Scientific Computing, Society for Industrial and Applied Mathematics, 2014, 36 (6), pp.2557-2583. ⟨10.1137/130948653⟩. ⟨hal-00915213v2⟩
  • Jean-Frédéric Gerbeau, Damiano Lombardi. Approximated Lax Pairs for the Reduced Order Integration of Nonlinear Evolution Equations. Journal of Computational Physics, Elsevier, 2014, 265, pp.246-269. ⟨10.1016/j.jcp.2014.01.047⟩. ⟨hal-00933172⟩
  • Cristobal Bertoglio, Dominique Chapelle, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Philippe Moireau. State observers of a vascular fluid-structure interaction model through measurements in the solid. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2013, 256, pp.149-168. ⟨10.1016/j.cma.2012.12.010⟩. ⟨hal-00764332v3⟩
  • Dominique Chapelle, Annabelle Collin, Jean-Frédéric Gerbeau. A surface-based electrophysiology model relying on asymptotic analysis and motivated by cardiac atria modeling. Mathematical Models and Methods in Applied Sciences, World Scientific Publishing, 2013, 23 (14), pp.2749-2776. ⟨10.1142/S0218202513500450⟩. ⟨hal-00723691v3⟩
  • Cristobal Bertoglio, Philippe Moireau, Jean-Frédéric Gerbeau. Sequential parameter estimation for fluid-structure problems. Application to hemodynamics. International Journal for Numerical Methods in Biomedical Engineering, John Wiley and Sons, 2012, 28 (4), pp.434-455. ⟨10.1002/cnm.1476⟩. ⟨inria-00603399⟩
  • Muriel Boulakia, Elisa Schenone, Jean-Frédéric Gerbeau. Reduced-order modeling for cardiac electrophysiology. Application to parameter identification. International Journal for Numerical Methods in Biomedical Engineering, John Wiley and Sons, 2012, 28, pp.727-744. ⟨10.1002/cnm.2465⟩. ⟨hal-00644396v2⟩
  • Charbel Farhat, Jean-Frédéric Gerbeau, Arthur Rallu. FIVER: A Finite Volume Method Based on Exact Two-Phase Riemann Problems and Sparse Grids for Multi-Material Flows with Large Density Jumps. Journal of Computational Physics, Elsevier, 2012, 231, pp.6360-6379. ⟨10.1016/j.jcp.2012.05.026⟩. ⟨hal-00703493⟩
  • Philippe Moireau, Nan Xiao, Matteo Astorino, C. Alberto Figueroa, Dominique Chapelle, et al.. External tissue support and fluid-structure simulation in blood flows. Biomechanics and Modeling in Mechanobiology, Springer Verlag, 2012, 11 (1-2), pp.1-18. ⟨10.1007/s10237-011-0289-z⟩. ⟨hal-00701801⟩
  • Matteo Astorino, Jeroen Hamers, Shawn Shadden, Jean-Frédéric Gerbeau. A robust and efficient valve model based on resistive immersed surfaces. International Journal for Numerical Methods in Biomedical Engineering, John Wiley and Sons, 2012, 28 (9), pp.937-959. ⟨10.1002/cnm.2474⟩. ⟨hal-00717213⟩
  • Philippe Moireau, Cristobal Bertoglio, Nan Xiao, C. Alberto Figueroa, Charles Taylor, et al.. Sequential identification of boundary support parameters in a fluid-structure vascular model using patient image data. Biomechanics and Modeling in Mechanobiology, Springer Verlag, 2012, 12 (3), pp.475-496. ⟨10.1007/s10237-012-0418-3⟩. ⟨hal-00760703⟩
  • Vincent Martin, Agnès Drochon, Odette Fokapu, Jean-Frédéric Gerbeau. MagnetoHemoDynamics in Aorta and Electrocardiograms. Physics in Medicine and Biology, IOP Publishing, 2012, 57 (10), pp.3177-3195. ⟨10.1088/0031-9155/57/10/3177⟩. ⟨inria-00628032v2⟩
  • Olivier Romain, Johan Mazeyrat, Patrick Garda, Hakeim Talleb, David Lautru, et al.. ENDOCOM: Implantable wireless pressure sensor for the follow-up of abdominal aortic aneurysm stented. Innovation and Research in BioMedical engineering, Elsevier Masson, 2011, 32 (3), pp.163 - 168. ⟨10.1016/j.irbm.2011.01.017⟩. ⟨hal-00665334⟩
  • Kevin Wang, Arthur Rallu, Jean-Frédéric Gerbeau, Charbel Farhat. Algorithms for Interface Treatment and Load Computation in Embedded Boundary Methods for Fluid and Fluid-Structure Interaction Problems. International Journal for Numerical Methods in Fluids, Wiley, 2011, 67 (9), pp.1175-1206. ⟨10.1002/fld.2556⟩. ⟨hal-00651118⟩
  • Alfonso Caiazzo, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Vincent Martin. Projection schemes for fluid flows through a porous interface. SIAM Journal on Scientific Computing, Society for Industrial and Applied Mathematics, 2011, 33 (2), pp.541-564. ⟨10.1137/100788124⟩. ⟨inria-00462103⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau, Antoine Gloria, Marina Vidrascu. A partitioned Newton method for the interaction of a fluid and a 3D shell structure. Revue Européenne de Mécanique Numérique/European Journal of Computational Mechanics, Hermès / Paris : Lavoisier 2010, 19 (5-7), pp.479-512. ⟨10.3166/ejcm.19.479-512⟩. ⟨hal-00701792⟩
  • Muriel Boulakia, Serge Cazeau, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Nejib Zemzemi. Mathematical Modeling of Electrocardiograms: A Numerical Study. Annals of Biomedical Engineering, Springer Verlag, 2010, 38 (3), pp.1071-1097. ⟨10.1007/s10439-009-9873-0⟩. ⟨inria-00400490v2⟩
  • Shawn Shadden, Matteo Astorino, Jean-Frédéric Gerbeau. Computational analysis of an aortic valve jet with Lagrangian coherent structures. Chaos: An Interdisciplinary Journal of Nonlinear Science, American Institute of Physics, 2010, 20, pp.017512-1. ⟨10.1063/1.3272780⟩. ⟨inria-00517786⟩
  • Dominique Chapelle, Jacques Sainte-Marie, Jean-Frédéric Gerbeau, Irene Vignon-Clementel. A poroelastic model valid in large strains with applications to perfusion in cardiac modeling. Computational Mechanics, Springer Verlag, 2010, 46 (1), pp.91-101. ⟨10.1007/s00466-009-0452-x⟩. ⟨inria-00542672⟩
  • Astrid Decoene, Jean-Frédéric Gerbeau. Sigma transformation and ALE formulation for three-dimensional free surface flows. International Journal for Numerical Methods in Fluids, Wiley, 2009, 59 (4), pp.357-386. ⟨10.1002/fld.1816⟩. ⟨inria-00541170⟩
  • Jean-Frédéric Gerbeau, Tony Lelièvre. Generalized Navier Boundary Condition and Geometric Conservation Law for surface tension. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2009, 198, pp.644-656. ⟨10.1016/j.cma.2008.09.011⟩. ⟨inria-00542241⟩
  • Matteo Astorino, Jean-Frédéric Gerbeau, Olivier Pantz, Karim-Frédéric Traore. Fluid-structure interaction and multi-body contact. Application to aortic valves. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2009, 198 (45-46), pp.3603-3612. ⟨10.1016/j.cma.2008.09.012⟩. ⟨inria-00542238⟩
  • Nuno Diniz dos Santos, Jean-Frédéric Gerbeau, Jean-François Bourgat. A partitioned fluid-structure algorithm for elastic thin valves with contact. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2008, 197 (19-20), pp.1750-1761. ⟨10.1016/j.cma.2007.03.019⟩. ⟨hal-00701780⟩
  • Muriel Boulakia, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Nejib Zemzemi. A coupled system of PDEs and ODEs arising in electrocardiograms modelling. Applied Mathematics Research eXpress, Oxford University Press (OUP): Policy H - Oxford Open Option A, 2008, 2008, pp.abn002. ⟨10.1093/amrx/abn002⟩. ⟨hal-00701786⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau, Vincent Martin. Numerical simulation of blood flows through a porous interface. ESAIM: Mathematical Modelling and Numerical Analysis, EDP Sciences, 2008, 42 (6), pp.961-990. ⟨10.1051/m2an:2008031⟩. ⟨hal-00701783⟩
  • Mohamed Belhadj, Eric Cancès, Jean-Frédéric Gerbeau, Andro Mikelić. Homogenization approach to filtration through a fibrous medium. Networks and Heterogeneous Media, AIMS-American Institute of Mathematical Sciences, 2007, 2 (3), pp.529-550. ⟨10.3934/nhm.2007.2.529⟩. ⟨hal-00701778⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau, Céline Grandmont. A projection semi-implicit scheme for the coupling of an elastic structure with an incompressible fluid. International Journal for Numerical Methods in Engineering, Wiley, 2007, 69 (4), pp.794-821. ⟨10.1002/nme.1792⟩. ⟨hal-00701685⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau, Céline Grandmont. A projection algorithm for fluid-stucture interaction problems with strong added-mass effect. Comptes Rendus. Mathématique, Académie des sciences (Paris), 2006, 342 (4), pp.279-284. ⟨10.1016/j.crma.2005.12.017⟩. ⟨hal-00701684⟩
  • Patrick Le Tallec, Jean-Frédéric Gerbeau, Patrice Hauret, Marina Vidrascu. Fluid structure interaction problems in large deformation. Comptes Rendus Mécanique, Elsevier, 2005, 333, pp.910-922. ⟨hal-00111445⟩
  • Paola Causin, Jean-Frédéric Gerbeau, Fabio Nobile. Added-mass effect in the design of partitioned algorithms for fluid-structure problems. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2005, 194 (42-44), pp.4506-4527. ⟨10.1016/j.cma.2004.12.005⟩. ⟨hal-00695954⟩
  • Paula Causin, Nuno Diniz dos Santos, Jean-Frédéric Gerbeau, Carine Guivier, Paul Métier. An embedded surface method for valve simulation. Application to stenotic aortic valve estimation. ESAIM: Proceedings, EDP Sciences, 2005, 14, pp.48-62. ⟨10.1051/proc:2005005⟩. ⟨hal-00085396⟩
  • Jean-Frédéric Gerbeau, Marina Vidrascu, Pascal Frey. Fluid-Structure Interaction in Blood Flows on Geometries coming from Medical Imaging. Computers and Structures, Elsevier, 2005, 83 (2-3), pp.155-165. ⟨10.1016/j.compstruc.2004.03.083⟩. ⟨hal-00700335⟩
  • Jean-Frédéric Gerbeau, Tony Lelièvre, Claude Le Bris. Modeling and simulation of the industrial production of aluminium : the nonlinear approach. Computers and Fluids, Elsevier, 2004, 33 (5-6), pp.801-814. ⟨10.1016/j.compfluid.2003.06.013⟩. ⟨hal-00695952⟩
  • Marc Thiriet, Stéphanie Salmon, Jean-Frédéric Gerbeau. Medical image-based computational model of pulsatile flow in saccular aneurisms. ESAIM: Mathematical Modelling and Numerical Analysis, EDP Sciences, 2003, Modelisation Mathématique et Analyse Numérique 37 (4), pp.663-679. ⟨10.1051/m2an:2003053⟩. ⟨hal-00017590⟩
  • Jean-Frédéric Gerbeau, Claude Le Bris, Tony Lelièvre. Simulations of MHD flows with moving interfaces. Journal of Computational Physics, Elsevier, 2003, 184 (1), pp.163-191. ⟨10.1016/S0021-9991(02)00025-6⟩. ⟨hal-00694626⟩
  • Mohamed Belhadj, Jean-Frédéric Gerbeau, Benoît Perthame. A multiscale colloid transport model with anistropic degenerate diffusion. Asymptotic Analysis, IOS Press, 2003, 34 (1), pp.41-54. ⟨hal-00694622⟩
  • Jean-Frédéric Gerbeau, Marina Vidrascu. A Quasi-Newton Algorithm Based on a Reduced Model for Fluid-Structure Interaction Problems in Blood Flows. ESAIM: Mathematical Modelling and Numerical Analysis, EDP Sciences, 2003, 37 (4), pp.631-647. ⟨10.1051/m2an:2003049⟩. ⟨hal-00694625⟩
  • Luca Formaggia, Jean-Frédéric Gerbeau, Fabio Nobile, Alfio Quarteroni. Numerical Treatment of Defective Boundary Conditions for the Navier-Stokes Equations. SIAM Journal on Numerical Analysis, Society for Industrial and Applied Mathematics, 2002, 40 (1), pp.376-401. ⟨10.1137/S003614290038296X⟩. ⟨hal-00691930⟩
  • Luca Formaggia, Jean-Frédéric Gerbeau, Fabio Nobile, Alfio Quarteroni. On the Coupling of 3D and 1D Navier-Stokes Equations for Flow Problems in Compliant Vessels. Computer Methods in Applied Mechanics and Engineering, Elsevier, 2001, 191 (6-7), pp.561-582. ⟨10.1016/S0045-7825(01)00302-4⟩. ⟨hal-00691928⟩
  • Jean-Frédéric Gerbeau, Benoît Perthame. Derivation of Viscous Saint-Venant System for Laminar Shallow Water ; Numerical Validation. Discrete and Continuous Dynamical Systems - Series B, American Institute of Mathematical Sciences, 2001, 1 (1), pp.89-102. ⟨10.3934/dcdsb.2001.1.89⟩. ⟨hal-00691701⟩
  • Jean-Frédéric Gerbeau. A stabilized finite element method for the incompressible magnetohydrodynamic equations. Numerische Mathematik, Springer Verlag, 2000, 87 (1), pp.83-111. ⟨10.1007/s002110000193⟩. ⟨hal-00691696⟩
  • Jean-Frédéric Gerbeau, Claude Le Bris. Comparison between two numerical methods for a magnetostatic problem. Calcolo, Springer Verlag, 2000, 37, pp.1-20. ⟨10.1007/s100920050001⟩. ⟨hal-00691699⟩
  • Jean-Frédéric Gerbeau, Claude Le Bris. A basic remark on some Navier-Stokes equations with body forces. Applied Mathematics Letters, Elsevier, 2000, 13 (3), pp.107-112. ⟨10.1016/S0893-9659(99)00194-9⟩. ⟨hal-00691698⟩
  • Jean-Frédéric Gerbeau, Claude Le Bris. A coupled system arising in Magnetohydrodynamics. Applied Mathematics Letters, Elsevier, 1999, 12 (3), pp.53-57. ⟨10.1016/S0893-9659(98)00172-4⟩. ⟨hal-00691693⟩
  • Jean-Frédéric Gerbeau, Claude Le Bris. On the long time behaviour of the solution to the two-fluids incompressible Navier-Stokes equations. Differential and integral equations, Khayyam Publishing, 1999, 12 (5), pp.691-740. ⟨hal-00701804⟩
  • Jean-Frédéric Gerbeau, Claude Le Bris, Michel Bercovier. Spurious velocities in the steady flow of an incompressible fluid subjected to external forces. International Journal for Numerical Methods in Fluids, Wiley, 1997, 25 (6), pp.679-695. ⟨10.1002/(SICI)1097-0363(19970930)25:6<679::AID-FLD582>3.0.CO;2-Q⟩. ⟨hal-00690238⟩
  • Jean-Frédéric Gerbeau, Claude Le Bris. Existence of solution for a density-dependent magnetohydrodynamic equation. Advances in Differential Equations, Khayyam Publishing, 1997, 2 (3), pp.427-452. ⟨hal-00690237⟩

Conference papers27 documents

  • Ludovic Boilevin-Kayl, Alexandre This, Miguel Angel Fernández, Jean-Frédéric Gerbeau. An efficient valve model based on resistive immersed surfaces enhanced with physiological data. 5th International Conference on Computational & Mathematical Biomedical Engineering, Etienne Boileau; David Nordsletten, Apr 2017, Pittsburgh, United States. ⟨hal-01519602⟩
  • Alexandre This, Ludovic Boilevin-Kayl, Hernán Morales, Odile Bonnefous, Pascal Allain, et al.. One Mesh To Rule Them All: Registration-Based Personalized Cardiac Flow Simulations. FIMH 2017 - 9th international conference on Functional Imaging and Modeling of the Heart., Pop M and Wright G, Jun 2017, Toronto, Canada. ⟨hal-01512309⟩
  • Chloé Audebert, Petru Bucur, Eric Vibert, Jean-Frédéric Gerbeau, Irene Vignon-Clementel. Closed-loop cardiovascular system model and partial hepatectomy simulation. 4th International Conference on Computational and Mathematical Biomedical Engineering - CMBE2015, Jun 2015, Cachan, France. ⟨hal-01240144⟩
  • Emanuela Abbate, Nejib Zemzemi, Yves Coudière, Jean-Frédéric Gerbeau. In silico assessment of drugs effects on human embryonic stem cells derived cardiomyocytes electrical activity. LACM 2015 (2nd International Workshop on Latest Advances in Cardiac Modeling), Mar 2015, German Heart Center, Munich, Germany. ⟨hal-01202019⟩
  • Cristobal Bertoglio, Philippe Moireau, Jean-Frédéric Gerbeau, Miguel Angel Fernández, Dominique Chapelle, et al.. Inverse problems in fluid-structure interaction: Application to hemodynamics. 2nd ECCOMAS Young Investigators Conference (YIC 2013), Sep 2013, Bordeaux, France. ⟨hal-00855837⟩
  • Grégory Arbia, Irene Vignon-Clementel, T.-Y. Hsia, Jean-Frédéric Gerbeau. A new approach for the outflow boundary condition in three-dimensional hemodynamics. MPF 2013 - V International Symposium on Modelling of Physiological Flows, CMCS - Ecole Polythecnique Fédérale de Lausanne and MOX - Politecnico di Milano, Jun 2013, Chia, Italy. ⟨hal-00918648⟩
  • Sanjay Pant, Benoit Fabrèges, Jean-Frédéric Gerbeau, Irene Vignon-Clementel. A multiscale filtering-based parameter estimation method for patient-specific coarctation simulations in rest and exercise. STACOM, MICCAI - 4th International Workshop on Statistical Atlases and Computational Models of the Heart held in conjunction with the 16th International conference on Medical Image Computing and Computer Assisted Intervention, 2013, Sep 2013, Nagoya, Japan. ⟨hal-00911339⟩
  • Benoit Fabrèges, Sanjay Pant, Irene Vignon-Clementel, Jean-Frédéric Gerbeau. Parameter estimation for a 3D Navier-Stokes - 0D coupled system: application to patient-specific haemodynamics. 3rd International Conference on Computational & Mathematical Biomedical Engineering, Dec 2013, Hong Kong, China. ⟨hal-00918373⟩
  • Annabelle Collin, Jean-Frédéric Gerbeau, Mélèze Hocini, Michel Haïssaguerre, Dominique Chapelle. Surface-based electrophysiology modeling and assessment of physiological simulations in atria. FIMH - 7th International Conference on Functional Imaging and Modeling of the Heart, Jun 2013, Londres, United Kingdom. pp.352-359, ⟨10.1007/978-3-642-38899-6_42⟩. ⟨hal-00815974⟩
  • Olivier Romain, Johan Mazeyrat, Patrick Garda, Hakeim Talleb, David Lautru, et al.. RFID implantable pressure sensor for the follow-up of abdominal aortic aneurysm stented. IEEE DTIS 2011 : 6th International conference on Design & Technology of Integrated Systems in nanoscale era, Apr 2011, Athens, Greece. pp.1-6, ⟨10.1109/DTIS.2011.5941418⟩. ⟨hal-00600948⟩
  • Muriel Boulakia, Jean-Frédéric Gerbeau. Parameter identification in cardiac electrophysiology using Proper Orthogonal Decomposition method. FIMH2011 : Sixth International Conference on Functional Imaging and Modeling of the Heart, May 2011, New York, United States. pp.315-322, ⟨10.1007/978-3-642-21028-0_40⟩. ⟨hal-00650606⟩
  • Irene Vignon-Clementel, Dominique Chapelle, Jacques Sainte-Marie, Jean-Frédéric Gerbeau. A poroelastic model valid in large strains with applications to perfusion in cardiac modeling. 10e colloque national en calcul des structures, May 2011, Giens, France. 2 p. ⟨hal-00592688⟩
  • Jean-Pierre Latere, Christian Homsy, Jean-Frédéric Gerbeau, Irene Vignon-Clementel. Myocardial delivery of cells to the heart: a comprehensive model to increase retention. 60th Annual Scientific Session and Expo of the American-College-of-Cardiology, Apr 2011, New Orleans, United States. pp.E208-E208, ⟨10.1016/S0735-1097(11)60208-8⟩. ⟨hal-00845056⟩
  • Vincent Martin, Agnès Drochon, Odette Fokapu, Jean-Frédéric Gerbeau. MagnetoHemoDynamics Effect on Electrocardiograms. FIMH 2011 - Sixth International Conference on Functional Imaging and Modeling of the Heart, May 2011, New-York, United States. pp.325-332, ⟨10.1007/978-3-642-21028-0_42⟩. ⟨hal-00652042⟩
  • Kristin Mcleod, Alfonso Caiazzo, Miguel Angel Fernández, Tommaso Mansi, Irene Vignon-Clementel, et al.. Atlas-Based Reduced Models of Blood Flows for Fast Patient-Specific Simulations. STACOM, Sep 2010, Beijin, China. pp.95-104, ⟨10.1007/978-3-642-15835-3_10⟩. ⟨inria-00517994⟩
  • Dominique Chapelle, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Philippe Moireau, Jacques Sainte-Marie, et al.. Numerical simulation of the electromechanical activity of the heart. Functional Imaging and Modeling of the Heart, 2009, Nice, France. pp.357-365. ⟨inria-00542779⟩
  • Cristobal Bertoglio, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Philippe Moireau. Filtering-based data assimilation in fluid-structure interaction: towards personalization of vascular models. 1st International Conference on Computational and Mathematical Biomedical Engineering, Jun 2009, Swansea, United Kingdom. ⟨hal-00793415⟩
  • Jean-Pierre Latere, Irene Vignon-Clementel, Keijo Nissen, Jean-Frédéric Gerbeau, Christian Homsy. Injection of Cells into the Heart: a Comprehensive Model to Increase Retention. 21st Annual Transcatheter Cardiovascular Therapeutics Conference, Sep 2009, San Francisco, United States. pp.78D-78D, ⟨10.1016/j.amjcard.2009.08.224⟩. ⟨hal-00845058⟩
  • Alfonso Caiazzo, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Vincent Martin, Irene Vignon-Clementel. Flow through stents in Abdominal Aortic Aneurysms. 1st International Conference on Computational and Mathematical Biomedical Engineering, Jun 2009, Swansea, United Kingdom. ⟨hal-00793489⟩
  • Matteo Astorino, Jean-Frédéric Gerbeau, Shawn Shadden, Irene Vignon-Clementel. Realistic Blood Flow Through the Aortic Valve: Simulation and Analysis. 1st International Conference on Computational and Mathematical Biomedical Engineering, Jun 2009, Swansea, United Kingdom. ⟨hal-00793401⟩
  • Géraldine Ebrard, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Fabrice Rossi, Nejib Zemzemi. From intracardiac electrograms to electrocardiograms. Models and metamodels. Functional Imaging and Modeling of the Heart, 2009, Nice, France. pp.524-533. ⟨inria-00542776⟩
  • Johan Mazeyrat, Olivier Romain, David Lautru, Man-Fai Wong, Bernard Berthier, et al.. Endocom: a wireless endoprosthesis dedicated to the follow-up of abdominal aortic aneurysms. European Society for Artificial Organs (ESAO), Sep 2009, Compiègne, France. pp.411-411. ⟨hal-00419764⟩
  • Agnès Drochon, O. Fokapu, Jean-Frédéric Gerbeau, V. Martin. Blood flow simulation and magnetohydrodynamic effects in MRI. MICCAI 2009.. Workshop on Cardiovascular Interventional Imaging and Biophysical Modelling, Imperial College,, Sep 2009, Londres, United Kingdom. ⟨hal-00457087⟩
  • Vincent Martin, D. Abi Abdallah, Agnès Drochon, Vincent Robin, Odette Fokapu, et al.. Blood flows and magnetohydrodynamics. 10th US National Congress on Computational Mechanics Minisymposia : Computational vascular and cardiovascular mechanics, Jul 2009, Columbus, Ohio, United States. ⟨hal-00445689⟩
  • Hervé Delingette, Maxime Sermesant, Jean-Marc Peyrat, Nicholas Ayache, Kawal Rhode, et al.. CardioSense3D: Patient-Specific Cardiac Simulation. Proceedings of IEEE International Conference on Biomedical Imaging: From Nano to Macro (ISBI'07), 2007, Metro Washington DC, USA, United States. pp.628-631. ⟨inria-00616052⟩
  • Jean-Frédéric Gerbeau, Vincent Martin, Astrid Decoene, François Clément. Parameter identification for a one-dimensional blood flow model. CEMRACS 2004 - Centre d'été de Mathématiques et Recherche Avancées en Calcul scientifique : Mathematics and applications to biology and medicine, Jul 2004, Marseille, France. pp.174-200, ⟨10.1051/proc:2005014⟩. ⟨hal-00700366⟩
  • Stéphanie Salmon, Marc Thiriet, Jean-Frédéric Gerbeau. Numerical simulations of blood flows in arteries for interventional medicines. Conference on Modelling and Simulation for Computer-aided Medicine and Surgery MS4CMS'02, 2002, France. pp.140-145. ⟨hal-00102619⟩

Poster communications1 document

  • Julien Bouyssier, Mostafa Bendahmane, Yves Coudière, Jean-Frédéric Gerbeau, Julien Pedron, et al.. Parameters estimation approach for the MEA/hiPSC-CM assays. Journées scientifiques du LIRYC, Sep 2016, Pessac, France. ⟨hal-01409683⟩

Book sections6 documents

  • Jean-Frédéric Gerbeau, Claude Le Bris, Tony Lelièvre. Modelling the instabilities in aluminum reduction cells. Lery, T. and Primicerio, M. and Esteban, M.J. and Fontes, M. and Maday, Y. and Mehrmann, V. and Quadros, G. and Schilders, W. and Schuppert, A. and Tewkesbury, H. European success stories in industrial mathematics, Springer, 2012, 978-3-642-23848-2. ⟨hal-00860246⟩
  • Jean-Frédéric Gerbeau. Computer Simulations in Electrocardiology. Lery, T. and Primicerio, M. and Esteban, M.J. and Fontes, M. and Maday, Y. and Mehrmann, V. and Quadros, G. and Schilders, W. and Schuppert, A. and Tewkesbury, H. European success stories in industrial mathematics, Springer, pp.11, 2012, 978-3-642-23848-2. ⟨hal-00860240⟩
  • Muriel Boulakia, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Nejib Zemzemi. Numerical simulations of electrocardiograms. Ambrosi, D. and Quarteroni, A. and Rozza, G. Modeling of Physiological Flows, Springer, pp.77-106, 2011, 978-88-470-1934-8. ⟨hal-00652367⟩
  • Jean-Frédéric Gerbeau. Simulation numérique de phénomènes couplés: l'exemple de l'interaction fluide-solide. Jeandel, C. and Mosseri, R. Le climat à découvert, CNRS Editions, 2011, 978-2-271-07198-9. ⟨hal-00653195⟩
  • Miguel Angel Fernández, Luca Formaggia, Jean-Frédéric Gerbeau, Alfio Quarteroni. The derivation of the equations for fluids and structure. Luca Formaggia and Alfio Quarteroni and Alessandro Veneziani. Cardiovascular Mathematics : Modeling and simulation of the circulatory system, 1, Springer, pp.77-121, 2009, MS&A, 978-88-470-1151-9. ⟨10.1007/978-88-470-1152-6_3⟩. ⟨hal-00793516⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau. Algorithms for fluid-structure interaction problems. L. Formaggia, A. Quarteroni, A. Veneziani. Cardiovascular Mathematics, 1, Springer Verlag, pp.307-346, 2009, Modeling, Simulation and Applications, 978-88-470-1151-9. ⟨inria-00542757⟩

Directions of work or proceedings2 documents

  • Mourad Ismail, Bertrand Maury, Jean-Frédéric Gerbeau. ESAIM: Proceedings CEMRACS 2008 - Modelling and Numerical Simulation of Complex Fluids. EDP Sciences, pp.227, 2008. ⟨hal-00666158⟩
  • Jean-Frédéric Gerbeau, Stéphane Labbé. Paris-sud working group on modelling and scientific computing 2006-2007. France. EDP Sciences, pp.228, 2007. ⟨hal-00750559⟩

Preprints, Working Papers, ...3 documents

  • Jean-Frédéric Gerbeau, Damiano Lombardi, Eliott Tixier. How to choose biomarkers in view of parameter estimation. 2018. ⟨hal-01811158⟩
  • Jean-Frédéric Gerbeau, Damiano Lombardi, Elisa Schenone. Approximated lax pairs and empirical interpolation for nonlinear parabolic partial differential equations . 2016. ⟨hal-01278778⟩
  • Astrid Decoene, Jean-Frédéric Gerbeau. Sigma transformation and ALE formulation for three-dimensional free surface flows. 2008. ⟨hal-00275463⟩

Reports20 documents

  • Jean-Frédéric Gerbeau, Damiano Lombardi. Reduced-Order Modeling based on Approximated Lax Pairs. [Research Report] RR-8137, INRIA. 2012, pp.21. ⟨hal-00752810⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau, Antoine Gloria, Marina Vidrascu. A partitioned Newton method for the interaction of a fluid and a 3D shell structure. [Research Report] RR-6623, INRIA. 2008, pp.30. ⟨inria-00315765⟩
  • Jean-Frédéric Gerbeau, Tony Lelièvre. Generalized Navier Boundary Condition and Geometric Conservation Law for surface tension. [Research Report] RR-6551, INRIA. 2008, pp.32. ⟨inria-00285206v2⟩
  • Matteo Astorino, Jean-Frédéric Gerbeau, Olivier Pantz, Karim-Frédéric Traore. Fluid-Structure Interaction and multi-body contact. Application to the aortic valves. [Research Report] RR-6583, INRIA. 2008, pp.23. ⟨inria-00300770⟩
  • Muriel Boulakia, Miguel Angel Fernández, Jean-Frédéric Gerbeau, Nejib Zemzemi. A coupled system of PDEs and ODEs arising in electrocardiograms modelling. [Research Report] RR-6352, INRIA. 2007, pp.24. ⟨inria-00186852v3⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau, Vincent Martin. Numerical simulation of blood flows through a porous interface. [Research Report] RR-6146, INRIA. 2007, pp.30. ⟨inria-00136971v2⟩
  • Nuno Diniz dos Santos, Jean-Frédéric Gerbeau, Jean-François Bourgat. A partitioned fluid-structure algorithm for elastic thin valves with contact. [Research Report] RR-6022, INRIA. 2006, pp.23. ⟨inria-00111991v2⟩
  • Jean-Frédéric Gerbeau, Tony Lelièvre. Variational formulation of the Generalized Navier Boundary Condition.. [Research Report] 2006, pp.17. ⟨inria-00081751⟩
  • Miguel Angel Fernández, Jean-Frédéric Gerbeau, Céline Grandmont. A projection semi-implicit scheme for the coupling of an elastic structure with an incompressible fluid. [Research Report] RR-5700, INRIA. 2005, pp.31. ⟨inria-00070315⟩
  • Mohamed Belhadj, Eric Cancès, Jean-Frédéric Gerbeau, Andro Mikelic. Homogenization approach to filtration through a fibrous medium. [Research Report] RR-5277, INRIA. 2004. ⟨inria-00071254⟩
  • Simone Deparis, Jean-Frédéric Gerbeau, Xavier Vasseur. A Dynamic Preconditioner for Newton-Krylov Algorithms: Application to Fluid-Structure Interaction. [Research Report] RR-5352, INRIA. 2004, pp.25. ⟨inria-00070650⟩
  • Paola Causin, Jean-Frédéric Gerbeau, Fabio Nobile. Added-mass effect in the design of partitioned algorithms for fluid-structure problems. [Research Report] RR-5084, INRIA. 2004. ⟨inria-00071499⟩
  • Jean-Frédéric Gerbeau, Marina Vidrascu, Pascal Frey. Fluid-Structure Interaction in Blood Flows on Geometries coming from Medical Imaging. [Research Report] RR-5052, INRIA. 2003. ⟨inria-00071531⟩
  • Jean-Frédéric Gerbeau, Marina Vidrascu. A Quasi-Newton Algorithm Based on a Reduced Model for Fluid-Structure Interaction Problems in Blood Flows. [Research Report] RR-4691, INRIA. 2003. ⟨inria-00071895⟩
  • Mohamed Belhadj, Jean-Frédéric Gerbeau, Benoît Perthame. Un modèle multiéchelle de transport de colloïdes avec diffusion dégénérée anisotrope. [Rapport de recherche] RR-4468, INRIA. 2002. ⟨inria-00072120⟩
  • Luca Formaggia, Jean-Frédéric Gerbeau, Fabio Nobile, Alfio Quarteroni. Numerical Treatment of Defective Boundary Conditions for the Navier-Stokes Equations. [Research Report] RR-4093, INRIA. 2001. ⟨inria-00072539⟩
  • Jean-Frédéric Gerbeau, Claude Le Bris, Tony Lelièvre. Simulations of MHD Flows with Moving Interfaces. [Research Report] RR-4277, INRIA. 2001. ⟨inria-00072310⟩
  • Luca Formaggia, Jean-Frédéric Gerbeau, Fabio Nobile, Alfio Quarteroni. On the Coupling of 3D and 1D Navier-Stokes Equations for Flow Problems in Compliant Vessels. [Research Report] RR-3862, INRIA. 2000. ⟨inria-00072794⟩
  • Jean-Frédéric Gerbeau, Benoît Perthame. Derivation of Viscous Saint-Venant System for Laminar Shallow Water; Numerical Validation. [Research Report] RR-4084, INRIA. 2000. ⟨inria-00072549⟩
  • Jean-Frédéric Gerbeau, Nathalie Glinsky-Olivier, Bernard Larrouturou. Semi-Implicit Roe-Type Fluxes for Low-Mach Number Flows. RR-3132, INRIA. 1997. ⟨inria-00073557⟩

Theses1 document

  • Jean-Frédéric Gerbeau. Problèmes mathématiques et numériques posés par la modélisation de l'electrolyse de l'aluminium. Mathématiques [math]. Ecole des Ponts ParisTech, 1998. Français. ⟨tel-00005593⟩