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Vincent Lesieur, Jean-François Martin, Hinz Hariet, Boris Fumanal, Sobhian Rouhollah, et al.. Implications of a phylogeographic approach for the selection of Ceutorhynchus assimilis as a potential biological control agent for Lepidium draba. Biological Control, Elsevier, 2018, 123, pp.43-52. ⟨10.1016/j.biocontrol.2018.05.001⟩. ⟨hal-02270252⟩

Emmanuel Guivier, Jean-François Martin, Nicolas Pech, Arnaud Ungaro, Rémi Chappaz, et al.. Microbiota Diversity Within and Between the Tissues of Two Wild Interbreeding Species. Microbial Ecology, Springer Verlag, 2018, 75 (3), pp.799-810. ⟨10.1007/s00248-017-1077-9⟩. ⟨hal-02270253⟩

Jakub Kreisinger, Lucie Schmiedová, Adéla Petrželková, Oldřich Tomášek, Marie Adamkova, et al.. Fecal microbiota associated with phytohaemagglutinin-induced immune response in nestlings of a passerine bird. Ecology and Evolution, Wiley Open Access, 2018, 8 (19), pp.9793-9802. ⟨10.1002/ece3.4454⟩. ⟨hal-02270244⟩

Arnaud Ungaro, Nicolas Pech, Jean-François Martin, R. J. Scott Mccairns, Jean-Philippe Mevy, et al.. Challenges and advances for transcriptome assembly in non-model species. PLoS ONE, Public Library of Science, 2017, 12 (9), pp.e0185020. ⟨10.1371/journal.pone.0185020⟩. ⟨hal-01681642⟩

Emmanuel Corse, Emese Meglecz, Gait Archambaud, Morgane Ardisson, Jean-François Martin, et al.. A from-benchtop-to-desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies. Molecular Ecology Resources, Wiley/Blackwell, 2017, 17 (6), pp.e146-e159. ⟨10.1111/1755-0998.12703⟩. ⟨hal-01681595⟩

Jakub Kreisinger, Lucie Kropackova, Adela Petrzelkova, Marie Adamkova, Oldrich Tomasek, et al.. Temporal Stability and the Effect of Transgenerational Transfer on Fecal Microbiota Structure in a Long Distance Migratory Bird. Frontiers in Microbiology, Frontiers Media, 2017, 8, ⟨10.3389/fmicb.2017.00050⟩. ⟨hal-01600971⟩

M.E. Maggia, Y. Vigouroux, J. F. Renno, F. Duponchelle, E. Desmarais, et al.. DNA Metabarcoding of Amazonian Ichthyoplankton Swarms. PLoS ONE, Public Library of Science, 2017, 12 (1), pp.e0170009. ⟨10.1371/journal.pone.0170009⟩. ⟨hal-01470522⟩

V. Lesieur, M. Jeanneau, Jean-François Martin, Marie-Claude Bon. Development and characterization of 11 microsatellite markers in the root-gall-forming weevil, Ceutorhynchus assimilis (Coleoptera: Curculionidae). Applied Entomology and Zoology, Springer Verlag, 2016, 51 (3), pp.495 - 500. ⟨10.1007/s13355-016-0414-7⟩. ⟨hal-01601364⟩

Grégory Mollot, Pierre-Rançois Duyck, Pierre Lefeuvre, Francoise Lescourret, Jean-François Martin, et al.. Cover Cropping Alters the Diet of Arthropods in a Banana Plantation: A Metabarcoding Approach. PLoS ONE, Public Library of Science, 2014, 9 (4), ⟨10.1371/journal.pone.0093740⟩. ⟨hal-01189949⟩

Pierre-Jean Male, Jean-François Martin, Maxime Galan, Valérie Deffontaine, Josef Bryja, et al.. Discongruence of Mhc and cytochrome b phylogeographical patterns in Myodes glareolus (Rodentia: Cricetidae). Biological Journal of the Linnean Society, Linnean Society of London, 2012, 105 (4), pp.881-899. ⟨10.1111/j.1095-8312.2011.01799.x⟩. ⟨hal-01506086⟩

Sylvain Piry, Emmanuel Guivier, A. Realini, Jean-François Martin. |SE|S|AM|E| Barcode: NGS-oriented software for amplicon characterization - application to species and environmental barcoding. Molecular Ecology Resources, Wiley/Blackwell, 2012, 12 (6), pp.1151-1157. ⟨10.1111/j.1755-0998.2012.03171.x ⟩. ⟨hal-01506133⟩

Melthide Sinama, Vincent Dubut, Caroline Costedoat, Gilles André, M. Junker, et al.. Challenges of microsatellite development in Lepidoptera: Euphydryas aurinia (Nymphalidae) as a case study. European Journal of Entomology, Czech Entomological Society, 2011, pp.261-266. ⟨hal-01294296⟩

Thibaut Malausa, André Gilles, Emese Meglécz, Hélène Blancard, Stéphanie Duthoy, et al.. High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries. Molecular Ecology Resources, Wiley/Blackwell, 2011, 11 (4), pp.638-644. ⟨10.1111/j.1755-0998.2011.02992.x⟩. ⟨hal-01506135⟩

André Gilles, Emese Meglécz, Nicolas Pech, Stéphanie Ferreira, Thibaut Malausa, et al.. Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing. BMC Genomics, BioMed Central, 2011, 12 (1), ⟨10.1186/1471-2164-12-245⟩. ⟨hal-01995051⟩

Vincent Dubut, Melthide Sinama, Jean-François Martin, Emese Meglecz, Juliette Fernandez, et al.. Cross-species amplification of 41 microsatellites in European cyprinids: A tool for evolutionary, population genetics and hybridization studies. BMC Research Notes, BioMed Central, 2010, 3. ⟨hal-01933480⟩

Vincent Dubut, Rémi Grenier, Emese Meglécz, Rémi Chappaz, Caroline Costedoat, et al.. Development of 55 novel polymorphic microsatellite loci for the critically endangered L. (Actinopterygii: Perciformes: Percidae) and cross-species amplification in five other percids. European Journal of Wildlife Research, Springer Verlag, 2010, 56 (6), pp.931-938. ⟨10.1007/s10344-010-0421-x⟩. ⟨hal-00609749⟩

Thibault Malausa, Laurianne Leniaud, Jean-François Martin, Philippe Audiot, Denis Bourguet, et al.. Molecular differentiation at nuclear loci in French host races of the European corn borer (Ostrinia nubilalis).. Genetics, Genetics Society of America, 2007, 176 (4), pp.2343-2355. ⟨10.1534/genetics.107.072108⟩. ⟨hal-00170697⟩

Eva Ottová, Andrea Simková, Jean-François Martin, Joëlle Goüy de Bellocq, Milan Gelnar, et al.. Evolution and trans-species polymorphism of MHC class IIbeta genes in cyprinid fish.. Fish and Shellfish Immunology, Elsevier, 2005, 18 (3), pp.199-222. ⟨10.1016/j.fsi.2004.07.004⟩. ⟨hal-00104518⟩