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Prevalence and risk factors for lung involvement on low-dose chest CT (LDCT) in a paucisymptomatic population of 247 patients affected by COVID-19

 Maxime Castelli , Arnaud Maurin , Axel Bartoli , Michael Dassa , Baptiste Marchi , et al.
Insights into Imaging, 2020, 11 (1), ⟨10.1186/s13244-020-00939-7⟩
Article dans une revue hal-03149249v1
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Autochthonous human and animal leptospirosis, Marseille, France

 Pablo Sanchez Fernandez , Angeli Kodjo , Hacene Medkour , Younes Laidoudi , Gregory Dubourg , et al.
IDCASES, 2020, 21, ⟨10.1016/j.idcr.2020.e00899⟩
Article dans une revue hal-03150175v1
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Analyse vidéo des comportements à risque des soignants au cours d'une épidémie à Clostridium difficile

 Olga Florea , Sophia Boudjema , Isabelle Legras , Elisabeth Costa , Philippe Brouqui , et al.
Journée nationale de formation des infirmier(ère)s en infectiologie, Jun 2013, Clermont Ferrand, France
Communication dans un congrès hal-02938014v1

Ultrarapid diagnosis, microscope imaging, genome sequencing, and culture isolation of SARS-CoV-2.

 Philippe Colson , Jean-Christophe J.-C. Lagier , Jean-Pierre Baudoin , Jacques Bou Khalil , Bernard La Scola , et al.
European Journal of Clinical Microbiology and Infectious Diseases, 2020, ⟨10.1007/s10096-020-03869-w⟩
Article dans une revue hal-02543971v1

The impact of the daily use of soap in rural areas in Senegal on respiratory infectious diseases, fevers and skin microbiota

 Codou Ndiaye , Hubert Bassene , Georges Diatta , Nafissatou Diagne , Philippe Parola , et al.
International Journal of Infectious Diseases, 2020, ⟨10.1016/j.ijid.2020.04.076⟩
Article dans une revue hal-02569510v1

Metagenomics, culturomics, and the human gut microbiota

 Sophie Amrane , Didier Raoult , Jean-Christophe J.-C. Lagier
Expert Review of Anti-infective Therapy, 2018, 16 (5), pp.373-375. ⟨10.1080/14787210.2018.1467268⟩
Article dans une revue hal-01858936v1
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Clinical and microbiological effect of a combination of hydroxychloroquine and azithromycin in 80 COVID-19 patients with at least a six-day follow up: A pilot observational study

 Philippe Gautret , Jean-Christophe J.-C. Lagier , Philippe Parola , van Thuan Hoang , Line Meddeb , et al.
Travel Medicine and Infectious Disease, 2020, pp.101663. ⟨10.1016/j.tmaid.2020.101663⟩
Article dans une revue hal-02547911v1

Human Bacterial Repertoire of the Urinary Tract: a Potential Paradigm Shift

 Aurelie Morand , Florent Cornu , Jean-Charles Dufour , Michel Tsimaratos , Jean-Christophe J.-C. Lagier , et al.
Journal of Clinical Microbiology, 2019, 57 (3), pp.e00675-18. ⟨10.1128/JCM.00675-18⟩
Article dans une revue hal-02442915v1

Non contiguous-finished genome sequence and description of Bacillus jeddahensis sp. nov.

 Fadi Bittar , Fehmida Bibi , Dhamodharan Ramasamy , Jean-Christophe J.-C. Lagier , Esam I. Azhar , et al.
Standards in Genomic Sciences, 2015, 10 (1), ⟨10.1186/s40793-015-0024-y⟩
Article dans une revue hal-01478581v1

“Duodenibacillus massiliensis” gen. nov., sp. nov., a new species identified in the human duodenum

 Morgane Mailhe , Davide Ricaboni , Alban Benezech , Jean-Christophe J.-C. Lagier , Pierre-Edouard Fournier , et al.
New Microbes and New Infections, 2016
Article dans une revue hal-01475906v1

Risungbinella massiliensis sp nov., a new member of Thermoactinomycetaceae isolated from human gut

 Gregory Dubourg , Jean-Christophe J.-C. Lagier , Catherine Robert , Nicholas Armstrong , Carine Couderc , et al.
Antonie van Leeuwenhoek, 2016, 109 (6), pp.773-784. ⟨10.1007/s10482-016-0677-6⟩
Article dans une revue hal-01458403v1
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Japanese encephalitis in a French traveler to Nepal

 Stanislas Lagarde , Jean-Christophe J.-C. Lagier , Remi N Charrel , Gilles Querat , Jessica Vanhomwegen , et al.
Journal of NeuroVirology, 2014, 20 (1), pp.99 - 102. ⟨10.1007/s13365-013-0226-2⟩
Article dans une revue hal-01851696v1
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Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition

 Matthieu Million , Maryam Tidjani Alou , Saber Khelaifia , Dipankar Bachar , Jean-Christophe J.-C. Lagier , et al.
Scientific Reports, 2016, 6 (1), pp.26051. ⟨10.1038/srep26051⟩
Article dans une revue hal-01439070v1

Microbial Culturomics Application for Global Health: Noncontiguous Finished Genome Sequence and Description of Pseudomonas massiliensis Strain CB-1(T) sp nov in Brazil

 Lucie Bardet , Teresa Cimmino , Clemence Buffet , Caroline Michelle , Jaishriram Rathored , et al.
OMICS, 2018, 22 (2), pp.164-175. ⟨10.1089/omi.2017.0027⟩
Article dans une revue hal-01791631v1
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Genome sequence and description of Clostridium niameyense sp. nov., isolated from a human with marasmus in Nigeria

 S. Chabou , M. Tidjani Alou , S. Khelaifia , Jean-Christophe J.-C. Lagier , N. Labas , et al.
New Microbes and New Infections, 2018, 24, pp.26-31. ⟨10.1016/j.nmni.2018.03.001⟩
Article dans une revue hal-02101219v1

Bacterial Cocktail to Treat Clostridium difficile Infection: Primum Non Nocere

 Matthieu Million , Jean-Christophe J.-C. Lagier , Herve Chaudet , Didier Raoult
Clinical Infectious Diseases, 2018, 67 (11), pp.1799. ⟨10.1093/cid/ciy459⟩
Article dans une revue hal-02000517v1

The Antioxidants Glutathione, Ascorbic Acid and Uric Acid Maintain Butyrate Production by Human Gut Clostridia in The Presence of Oxygen In Vitro

 Matthieu Million , Nicholas Armstrong , Saber Khelaifia , Elodie Guilhot , Magali Richez , et al.
Scientific Reports, 2020, 10 (1), ⟨10.1038/s41598-020-64834-3⟩
Article dans une revue hal-02889391v1
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Pattern of infections in French and migrant homeless hospitalised at Marseille infectious disease units, France: A retrospective study, 2017–2018

 Tran Duc Anh Ly , Thi Loi Dao , van Thuan Hoang , David Braunstein , Philippe Brouqui , et al.
Travel Medicine and Infectious Disease, 2020, pp.101768. ⟨10.1016/j.tmaid.2020.101768⟩
Article dans une revue hal-02869028v1

Whippleʼs disease and Tropheryma whipplei infections

 Jean-Christophe J.-C. Lagier , Didier Raoult
Current Opinion in Infectious Diseases, 2018, 31 (6), pp.463-470. ⟨10.1097/QCO.0000000000000489⟩
Article dans une revue hal-02387397v1
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Detection of Borrelia crocidurae in a vaginal swab after miscarriage, rural Senegal, Western Africa

 Ndeye Safietou Fall , Nafissatou Diagne , Oleg Mediannikov , Florence Fenollar , Philippe Parola , et al.
International Journal of Infectious Diseases, 2020, 91, pp.261-263. ⟨10.1016/j.ijid.2019.12.020⟩
Article dans une revue hal-02446310v1

Natural history of COVID-19 and therapeutic options

 Philippe Gautret , Matthieu Million , Pierre-Andre Jarrot , Laurence Camoin-Jau , Philippe Colson , et al.
EXPERT REVIEW OF CLINICAL IMMUNOLOGY, 2020, 16 (12), pp.1159-1184. ⟨10.1080/1744666X.2021.1847640⟩
Article dans une revue hal-03149245v1

Does spitting in public play a role in transmitting SARS-CoV-2?

 Philippe Gautret , Philippe Colson , Jean-Christophe J.-C. Lagier , Philippe Parola , Didier Raoult
TRAVEL MEDICINE AND INFECTIOUS DISEASE, 2020, 36, ⟨10.1016/j.tmaid.2020.101759⟩
Article dans une revue hal-03149945v1
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Case report: Ribavirin and vitamin A in a severe case of measles

 Amandine Bichon , Camille Aubry , Lucas Benarous , Hortense Drouet , Christine Zandotti , et al.
Medicine, 2017, 96 (50), ⟨10.1097/MD.0000000000009154⟩
Article dans une revue hal-01729782v1

Greffe de microbiote fécal et infections-Mise au point, perspectives

 Jean-Christophe J.-C. Lagier , Didier Raoult
Médecine/Sciences, 2016, 32 (11), pp.991--997
Article dans une revue hal-01476006v1
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Gorilla gorilla gorilla gut: a potential reservoir of pathogenic bacteria as revealed using culturomics and molecular tools

 Fadi Bittar , Mamadou B. Keita , Jean-Christophe J.-C. Lagier , Martine Peeters , Eric Delaporte , et al.
Scientific Reports, 2014, 4 (7174 ), ⟨10.1038/srep07174⟩
Article dans une revue hal-01241992v1
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A Metagenomic Investigation of the Duodenal Microbiota Reveals Links with Obesity

 Emmanouil Angelakis , F. Armougom , Frédéric Carrière , Dipankar Bachar , René Laugier , et al.
PLoS ONE, 2015, 10 (e0137784), ⟨10.1371/journal.pone.0137784⟩
Article dans une revue hal-01237967v1

Failure of metagenomics in detecting emerging pathogens, the Clostridium difficile paradigm

 Sophie Amrane , Jean-Christophe J.-C. Lagier , Didier Raoult
Journal of Infection, 2019, 78 (5), pp.409-421. ⟨10.1016/j.jinf.2019.02.014⟩
Article dans une revue hal-02262516v1

Complications of peripheral venous catheters (PVCs): the need to propose alternative route of administration

 Morgane Mailhe , Camille Aubry , Philippe Brouqui , Pierre Michelet , Didier Raoult , et al.
International Journal of Antimicrobial Agents, 2020, pp.105875. ⟨10.1016/j.ijantimicag.2020.105875⟩
Article dans une revue hal-02445595v1
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Extensive culturomics of 8 healthy samples enhances metagenomics efficiency

 Ami Diakite , Gregory Dubourg , Niokhor Dione , Pamela Afouda , Sara Bellali , et al.
PLoS ONE, 2019, 14 (10), pp.e0223543. ⟨10.1371/journal.pone.0223543⟩
Article dans une revue hal-02467010v1

Bouillabaisse or Fish Soup: The Limitations of Meta-analysis Confronted to the Inconsistency of Fecal Microbiota Transplantation Studies

 Jean-Christophe J.-C. Lagier , Matthieu Million , Didier Raoult
Clinical Infectious Diseases, 2019, ⟨10.1093/cid/ciz707⟩
Article dans une revue hal-02507368v1
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