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Journal articles102 documents

  • Susana Coelho, J Cock. Brown Algal Model Organisms. Annual Review of Genetics, Annual Reviews, 2020. ⟨hal-03082916⟩
  • Haiqin Yao, Delphine Scornet, Murielle Jam, Cécile Hervé, Philippe Potin, et al.. BIOCHEMICAL CHARACTERISTICS OF A DIFFUSIBLE FACTOR THAT INDUCES GAMETOPHYTE TO SPOROPHYTE SWITCHING IN THE BROWN ALGA ECTOCARPUS. Journal of Phycology, Wiley, In press. ⟨hal-03089431⟩
  • Simon Bourdareau, Leila Tirichine, Damarys Loew, Delphine Scornet, Yue Wu, et al.. Histone modifications during the life cycle of the brown alga Ectocarpus. Genome Biology, BioMed Central, In press. ⟨hal-03084385⟩
  • Susana Coelho, Akira Peters, Dieter Müller, J. Mark Cock. Ectocarpus: an evo-devo model for the brown algae. EvoDevo, BioMed Central, 2020, 11 (1), ⟨10.1186/s13227-020-00164-9⟩. ⟨hal-02935769⟩
  • Haiqin Yao, Delphine Scornet, Yacine Badis, Akira Peters, Murielle Jam, et al.. Production and Bioassay of a Diffusible Factor That Induces Gametophyte-to-Sporophyte Developmental Reprogramming in the Brown Alga Ectocarpus. Bio-protocol , Bio-protocol LCC, 2020, 10, ⟨10.21769/bioprotoc.3753⟩. ⟨hal-02995785⟩
  • Lyam Baudry, Nadège Guiglielmoni, Hervé Marie-Nelly, Alexandre Cormier, Martial Marbouty, et al.. instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder. Genome Biology, BioMed Central, 2020, 21 (1), ⟨10.1186/s13059-020-02041-z⟩. ⟨pasteur-02873422⟩
  • Trevor Bringloe, Samuel Starko, Rachael Wade, Christophe Vieira, Hiroshi Kawai, et al.. Phylogeny and Evolution of the Brown Algae. Critical Reviews in Plant Sciences, Taylor & Francis, 2020, 39, pp.281 - 321. ⟨10.1080/07352689.2020.1787679⟩. ⟨hal-02995644⟩
  • Ji Won Choi, Louis Graf, Akira Peters, J.Mark Cock, Koki Nishitsuji, et al.. Organelle inheritance and genome architecture variation in isogamous brown algae. Scientific Reports, Nature Publishing Group, 2020, 10 (1), ⟨10.1038/s41598-020-58817-7⟩. ⟨hal-02935623⟩
  • Benoît Calmes, Martina Strittmatter, Bertrand Jacquemin, Marie-Mathilde Perrineau, Céline Rousseau, et al.. Parallelisable non-invasive biomass, fitness and growth measurement of macroalgae and other protists with nephelometry. Algal Research - Biomass, Biofuels and Bioproducts, Elsevier, 2020, 46, pp.101762. ⟨10.1016/j.algal.2019.101762⟩. ⟨hal-02462340⟩
  • Baptiste Bidon, Samar Kabbara, Vincent Courdavault, Gaëlle Glévarec, Audrey Oudin, et al.. Cytokinin and Ethylene Cell Signaling Pathways from Prokaryotes to Eukaryotes. Cells, MDPI, 2020, ⟨10.3390/cells9112526⟩. ⟨hal-03019153⟩
  • Lyam Baudry, Martial Marbouty, Hervé Marie-Nelly, Alexandre Cormier, Nadège Guiglielmoni, et al.. Chromosome-level quality scaffolding of brown algal genomes using InstaGRAAL, a proximity ligation-based scaffolder. BioRxiv, 2019, ⟨10.1101/2019.12.22.882084⟩. ⟨hal-02947625⟩
  • Laure Mignerot, Chikako Nagasato, Akira Peters, Marie-Mathilde Perrineau, Delphine Scornet, et al.. Unusual Patterns of Mitochondrial Inheritance in the Brown Alga Ectocarpus. Molecular Biology and Evolution, Oxford University Press (OUP), 2019, ⟨10.1093/molbev/msz186⟩. ⟨hal-02269449⟩
  • Susana Coelho, Laure Mignerot, J. Mark Cock. Origin and evolution of sex‐determination systems in the brown algae. New Phytologist, Wiley, 2019, 222 (4), pp.1751-1756. ⟨10.1111/nph.15694⟩. ⟨hal-02137076⟩
  • Samar Kabbara, Baptiste Bidon, Jaafar Kilani, Thomas Duge de Bernonville, Marc Clastre, et al.. Megaviruses: an involvement in phytohormone receptor gene transfer in brown algae?. Gene, Elsevier, 2019, 704, pp.149-151. ⟨10.1016/j.gene.2019.04.055⟩. ⟨hal-02137038⟩
  • Alok Arun, Susana Coelho, Akira Peters, Simon Bourdareau, Laurent Pérès, et al.. Convergent recruitment of TALE homeodomain life cycle regulators to direct sporophyte development in land plants and brown algae. eLife, eLife Sciences Publication, 2019, 8, pp.eLife 2019;8:e43101. ⟨10.7554/eLife.43101⟩. ⟨hal-02042404⟩
  • Laure Mignerot, Komlan Avia, Remy Luthringer, Agnieszka Lipinska, Akira Peters, et al.. A key role for sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus. PLoS Genetics, Public Library of Science, 2019, 15 (6), pp.e1008211. ⟨10.1371/journal.pgen.1008211⟩. ⟨hal-02170844⟩
  • A. Lipinska, M. Serrano-Serrano, A. Cormier, A. Peters, K. Kogame, et al.. Rapid turnover of life-cycle-related genes in the brown algae. Genome Biology, BioMed Central, 2019, 20, pp.35. ⟨10.1186/s13059-019-1630-6⟩. ⟨hal-02046119⟩
  • Samar Kabbara, Anais Herivaux, Thomas Dugé de Bernonville, Vincent Courdavault, Marc Clastre, et al.. Diversity and Evolution of Sensor Histidine Kinases in Eukaryotes. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2019, 11 (1), pp.86-108. ⟨10.1093/gbe/evy213⟩. ⟨hal-02098285⟩
  • Komlan Avia, Agnieszka Lipinska, Laure Mignerot, Alejandro Montecinos, Mahwash Jamy, et al.. Genetic Diversity in the UV Sex Chromosomes of the Brown Alga Ectocarpus. Genes, MDPI, 2018, ⟨10.3390/genes9060286⟩. ⟨hal-02406706⟩
  • Nicolas Macaisne, Fuli Liu, Delphine Scornet, Akira F. Peters, Agnieszka Lipinska, et al.. The Ectocarpus IMMEDIATE UPRIGHT gene encodes a member of a novel family of cysteine-rich proteins that have an unusual distribution across the eukaryotes. Development (Cambridge, England), Company of Biologists, 2017, ⟨10.1242/dev.141523⟩. ⟨hal-01436640⟩
  • Agnieszka Lipinska, Nicholas Toda, Svenja Heesch, Akira Peters, J. Mark Cock, et al.. Multiple gene movements into and out of haploid sex chromosomes. Genome Biology, BioMed Central, 2017, 18, pp.104. ⟨10.1186/s13059-017-1201-7⟩. ⟨hal-01806388⟩
  • Alexandre Cormier, Komlan Avia, Lieven Sterck, Thomas Derrien, Valentin Wucher, et al.. Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus. New Phytologist, Wiley, 2017, 214 (1), pp.219-232. ⟨10.1111/nph.14321⟩. ⟨hal-01402123⟩
  • Komlan Avia, Susana M Coelho, Gabriel J Montecinos, Alexandre Cormier, Fiona Lerck, et al.. High-density genetic map and identification of QTLs for responses to temperature and salinity stresses in the model brown alga Ectocarpus. Scientific Reports, Nature Publishing Group, 2017, 7, pp.43241. ⟨10.1038/srep43241⟩. ⟨hal-01510346⟩
  • J. Mark Cock, Fuli Liu, Delin Duan, Simon Bourdareau, Agnieszka Lipinska, et al.. Rapid Evolution of microRNA Loci in the Brown Algae. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2017, 9 (3), pp.740 - 749. ⟨10.1093/gbe/evx038⟩. ⟨hal-01502456⟩
  • Olivier Godfroy, Toshiki Uji, Chikako Nagasato, Agnieszka Lipinska, Delphine Scornet, et al.. DISTAG/TBCCd1 Is Required for Basal Cell Fate Determination in Ectocarpus. The Plant cell, American Society of Plant Biologists (ASPB), 2017, 29 (12), pp.3102-3122. ⟨10.1105/tpc.17.00440⟩. ⟨hal-01806392⟩
  • Jaromir Guzinski, Stéphane Mauger, J. Mark Cock, Myriam Valero. Characterization of newly developed expressed sequence tag-derived microsatellite markers revealed low genetic diversity within and low connectivity between European Saccharina latissima populations. Journal of Applied Phycology, Springer Verlag, 2016, 28 (5), pp.3057-3070. ⟨10.1007/s10811-016-0806-7⟩. ⟨hal-01297556⟩
  • Nicolas Macaisne, Fuli Liu, Delphine Scornet, Akira Peters, Agnieszka Lipinska, et al.. The Ectocarpus IMMEDIATE UPRIGHT gene encodes a member of a novel 1 family of cysteine-rich proteins that have an unusual distribution across the eukaryotes. Development, Palgrave Macmillan, 2016, 144, pp.409-418. ⟨10.1242/dev.141523⟩. ⟨hal-01925145⟩
  • Agnieszka Lipinska, Sophia Ahmed, Akira F Peters, Sylvain Faugeron, J. Mark Cock, et al.. Development of PCR‐Based Markers to Determine the Sex of Kelps. PLoS ONE, Public Library of Science, 2015, 10 (10), pp.e0140535. ⟨10.1371/journal.pone.0140535⟩. ⟨hal-01226462⟩
  • Lucia Couceiro, Mickael Le Gac, Heather M. Hunsperger, Stéphane Mauger, Christophe Destombe, et al.. Evolution and maintenance of haploid-diploid life cycles in natural populations: the case of the marine brown alga Ectocarpus. Evolution, Wiley, 2015, 69 (7), pp.1808-1822. ⟨10.1111/evo.12702⟩. ⟨hal-01167462⟩
  • Olivier Godfroy, Akira F. Peters, Susana M. Coelho, J. Mark Cock. Genome-wide comparison of ultraviolet and ethyl methanesulphonate mutagenesis methods for the brown alga Ectocarpus. Marine Genomics, Elsevier, 2015, 24 (Part 1), pp.109-113. ⟨10.1016/j.margen.2015.03.007⟩. ⟨hal-01142006⟩
  • Agnieszka Lipinska, Alexandre Cormier, Remy Luthringer, Akira F Peters, Erwan Corre, et al.. Sexual Dimorphism and the Evolution of Sex-Biased Gene Expression in the Brown Alga Ectocarpus. Molecular Biology and Evolution, Oxford University Press (OUP), 2015, 32 (6), pp.1581-1597. ⟨10.1093/molbev/msv049⟩. ⟨hal-01285048⟩
  • James E. Tarver, Alexandre Cormier, Natalia Pinzón, Richard S. Taylor, Wilfrid Carré, et al.. microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown alga Ectocarpus. Nucleic Acids Research, Oxford University Press, 2015, 43 (13), pp.6384-6398. ⟨10.1093/nar/gkv578⟩. ⟨hal-01278012⟩
  • Remy Luthringer, Agnieszka Lipinska, Denis Roze, Alexandre Cormier, Nicolas Macaisne, et al.. The Pseudoautosomal Regions of the U/V Sex Chromosomes of the Brown Alga Ectocarpus Exhibit Unusual Features. Molecular Biology and Evolution, Oxford University Press (OUP), 2015, 32 (11), pp.2973-2985. ⟨10.1093/molbev/msv173⟩. ⟨hal-01806430⟩
  • Gang Fu, Chikako Nagasato, Seiko Oka, J Mark Cock, Taizo Motomura. Proteomics analysis of heterogeneous flagella in brown algae (stramenopiles).. Protist, Elsevier, 2014, 165 (5), pp.662-75. ⟨hal-01113862⟩
  • J Mark Cock, Olivier Godfroy, Nicolas Macaisne, Akira Peters, Susana Coelho. Evolution and regulation of complex life cycles: a brown algal perspective. Current Opinion in Plant Biology, Elsevier, 2014, 17, pp.1-6. ⟨10.1016/j.pbi.2013.09.004⟩. ⟨hal-01806434⟩
  • Sophia Ahmed, J. Mark Cock, Eugenie Pessia, Remy Luthringer, Alexandre Cormier, et al.. A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp.. Current Biology - CB, Elsevier, 2014, 24 (17), pp.1945-1957. ⟨10.1016/j.cub.2014.07.042⟩. ⟨hal-01132642⟩
  • Jonas Collén, Betina Porcel, Wilfrid Carré, Steven G Ball, Cristian Chaparro, et al.. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩. ⟨hal-01073830⟩
  • Garry Farnham, Martina Strittmatter, Susana Coelho, J. Mark Cock, Colin Brownlee. GENE SILENCING IN FUCUS EMBRYOS: DEVELOPMENTAL CONSEQUENCES OF RNAi-MEDIATED CYTOSKELETAL DISRUPTION. Journal of Phycology, Wiley, 2013, 49 (5), pp.819-829. ⟨10.1111/jpy.12096⟩. ⟨hal-01806438⟩
  • Susana M Coelho, Nathalie Simon, Sophia Ahmed, J Mark Cock, Frédéric Partensky. Ecological and evolutionary genomics of marine photosynthetic organisms.. Molecular Ecology, Wiley, 2013, 22 (3), pp.867-907. ⟨10.1111/mec.12000⟩. ⟨hal-00817749⟩
  • Alok Arun, Nick T Peters, Delphine Scornet, Akira F Peters, J. Mark Cock, et al.. Non-cell autonomous regulation of life cycle transitions in the model brown alga Ectocarpus.. New Phytologist, Wiley, 2013, 197 (2), pp.503-10. ⟨10.1111/nph.12007⟩. ⟨hal-01071265⟩
  • Susana Coelho, Delphine Scornet, Sylvie Rousvoal, Nick Peters, Laurence Dartevelle, et al.. Ectocarpus: A Model Organism for the Brown Algae. Cold Spring Harbor protocols, Cold Spring Harbor, NY : Cold Spring Harbor Laboratory Press, 2012, 2012 (2), pdb.emo065821 - pdb.emo065821. ⟨10.1101/pdb.emo065821⟩. ⟨hal-01926740⟩
  • J. Mark Cock, Lieven Sterck, Sophia Ahmed, Andrew E. Allen, Grigoris Amoutzias, et al.. The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium. Advances in Botanical Research, Elsevier, 2012, 64, pp.141 - 184. ⟨10.1016/B978-0-12-391499-6.00005-0⟩. ⟨hal-02649287⟩
  • Simon M Dittami, Caroline Proux, Sylvie Rousvoal, Akira F Peters, J Mark Cock, et al.. Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae). BMC Molecular Biology, BioMed Central, 2011, 12, pp.2. ⟨10.1186/1471-2199-12-2⟩. ⟨hal-00925432⟩
  • J. Mark Cock, Akira F. Peters, Susana M. Coelho. Brown algae. Current Biology - CB, Elsevier, 2011, 21 (15), pR573-R575. ⟨10.1016/j.cub.2011.05.006⟩. ⟨hal-01806442⟩
  • Susana M. Coelho, Olivier Godfroy, Alok Arun, Gildas Le Corguillé, Akira F. Peters, et al.. OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2011, 108 (28), pp.11518-11523. ⟨10.1073/pnas.1102274108⟩. ⟨hal-01806390⟩
  • Ludovic Delage, Catherine Leblanc, Pi Nyvall Collén, Bernhard Gschloessl, Marie-Pierre Oudot, et al.. In Silico Survey of the Mitochondrial Protein Uptake and Maturation Systems in the Brown Alga Ectocarpus siliculosus. PLoS ONE, Public Library of Science, 2011, 6 (5), pp.e19540. ⟨10.1371/journal.pone.0019540⟩. ⟨hal-01806425⟩
  • Svenja Heesch, Ga Youn Cho, Akira Peters, Gildas Le Corguillé, Cyril Falentin, et al.. A sequence-tagged genetic map for the brown alga Ectocarpus siliculosus provides large-scale assembly of the genome sequence. New Phytologist, Wiley, 2010, 188 (1), pp.42-51. ⟨10.1111/j.1469-8137.2010.03273.x⟩. ⟨hal-01806415⟩
  • Akira Peters, Serinde van Wijk, Ga Youn Cho, Delphine Scornet, Takeaki Hanyuda, et al.. Reinstatement of Ectocarpus crouaniorum Thuret in Le Jolis as a third common species of Ectocarpus (Ectocarpales, Phaeophyceae) in Western Europe, and its phenology at Roscoff, Brittany. Phycological Research, Wiley, 2010, 58 (3), pp.157 - 170. ⟨10.1111/j.1440-1835.2010.00574.x⟩. ⟨hal-01925565⟩
  • John H. Bothwell, Dominique Marie, Akira F. Peters, J. Mark Cock, Susana M. Coelho. Role of endoreduplication and apomeiosis during parthenogenetic reproduction in the model brown alga Ectocarpus. New Phytologist, Wiley, 2010, 188 (1), pp.111-121. ⟨10.1111/j.1469-8137.2010.03357.x⟩. ⟨hal-01254018⟩
  • Delphine Cast, J. Mark Cock, Bernard Kloareg, Benoit Menand, Gurvan Michel, et al.. Models for understanding eucaryote development. Biofutur, Elsevier - Cachan : Lavoisier, 2010, 314, pp.30-33. ⟨hal-01183325⟩
  • Akira F. Peters, Aaron D. Mann, César A. Córdova, Juliet Brodie, Juan A. Correa, et al.. Genetic diversity of Ectocarpus (Ectocarpales, Phaeophyceae) in Peru and northern Chile, the area of origin of the genome-sequenced strain. New Phytologist, Wiley, 2010, 188 (1), pp.30-41. ⟨10.1111/j.1469-8137.2010.03303.x⟩. ⟨hal-01806412⟩
  • Gurvan Michel, Thierry Tonon, Delphine Scornet, J. Mark Cock, Bernard Kloareg. Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes. New Phytologist, Wiley, 2010, 188 (1), pp.67-81. ⟨10.1111/j.1469-8137.2010.03345.x⟩. ⟨hal-01806417⟩
  • Andrés Ritter, Martin Ubertini, Sarah Romac, Fanny Gaillard, Ludovic Delage, et al.. Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus. Proteomics, Wiley-VCH Verlag, 2010, 10 (11), pp.2074 - 2088. ⟨10.1002/pmic.200900004⟩. ⟨hal-01925564⟩
  • J. Mark Cock, Lieven Sterck, Pierre Rouzé, Delphine Scornet, Andrew E. Allen, et al.. The $Ectocarpus$ genome and the independent evolution of multicellularity in brown algae. Nature, Nature Publishing Group, 2010, 465 (7298), pp.617-621. ⟨10.1038/nature09016⟩. ⟨cea-00906990⟩
  • Simon M Dittami, Delphine Scornet, Jean-Louis Petit, Béatrice Segurens, Corinne da Silva, et al.. Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress. Genome Biology, BioMed Central, 2009, 10, pp.R66. ⟨10.1186/gb-2009-10-6-r66⟩. ⟨hal-01806423⟩
  • Gildas Le Corguillé, Gareth Pearson, Marta Valente, Carla Viegas, Bernhard Gschloessl, et al.. Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids. BMC Evolutionary Biology, BioMed Central, 2009, 9, pp.253. ⟨10.1186/1471-2148-9-253⟩. ⟨hal-01806420⟩
  • Akira F. Peters, Delphine Scornet, Morgane Ratin, Bénédicte Charrier, Annabelle Monnier, et al.. Life-cycle-generation-specific developmental processes are modified in the immediate upright mutant of the brown alga Ectocarpus siliculosus. Development (Cambridge, England), Company of Biologists, 2008, 135 (8), pp.1503-1512. ⟨10.1242/dev.016303⟩. ⟨hal-01806436⟩
  • Steven Robbens, Pierre Rouzé, J. Mark Cock, Jürg Spring, Alexandra Worden, et al.. The FTO Gene, Implicated in Human Obesity, Is Found Only in Vertebrates and Marine Algae. Journal of Molecular Evolution, Springer Verlag, 2008, 66 (1), pp.80-84. ⟨10.1007/s00239-007-9059-z⟩. ⟨hal-01925570⟩
  • Bénédicte Charrier, Susana Coelho, Aude Le Bail, Thierry Tonon, Gurvan Michel, et al.. Development and physiology of the brown alga Ectocarpus siliculosus: two centuries of research. New Phytologist, Wiley, 2008, 177 (2), pp.319-332. ⟨10.1111/j.1469-8137.2007.02304.x⟩. ⟨hal-01806426⟩
  • Aude Le Bail, Simon Dittami, Pierre-Olivier de Franco, Sylvie Rousvoal, J. Mark Cock, et al.. Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus. BMC Molecular Biology, BioMed Central, 2008, 9, pp.75. ⟨10.1186/1471-2199-9-75⟩. ⟨hal-01806432⟩
  • Bernhard Gschloessl, Yann Guermeur, J. Mark Cock. HECTAR: A method to predict subcellular targeting in heterokonts. BMC Bioinformatics, BioMed Central, 2008, 9 (393), pp.9:393. ⟨10.1186/1471-2105-9-393⟩. ⟨hal-00359779⟩
  • Aude Le Bail, Bernard Billoud, Carole Maisonneuve, Akira Peters, J. Mark Cock, et al.. EARLY DEVELOPMENT PATTERN OF THE BROWN ALGA ECTOCARPUS SILICULOSUS (ECTOCARPALES, PHAEOPHYCEAE) SPOROPHYTE 1. European Journal of Phycology, Taylor & Francis, 2008, 44 (5), pp.1269 - 1281. ⟨10.1111/j.1529-8817.2008.00582.x⟩. ⟨hal-01925566⟩
  • Susana Coelho, Akira Peters, Bénédicte Charrier, Denis Roze, Christophe Destombe, et al.. Complex life cycles of multicellular eukaryotes: New approaches based on the use of model organisms. Gene, Elsevier, 2007, 406 (1-2), pp.152 - 170. ⟨10.1016/j.gene.2007.07.025⟩. ⟨hal-01926745⟩
  • Sylvie Baudino, Jean-Claude Caissard, Véronique Bergougnoux, Frédéric Jullien, Jean-Louis Magnard, et al.. Production and Emission of Volatile Compounds by Petal Cells.. Plant Signaling and Behavior, Taylor & Francis, 2007, 2 (6), pp.525-526. ⟨ujm-00188391⟩
  • Anne Rocher, Christian Dumas, J. Mark Cock. A W-box is required for full expression of the SA-responsive gene SFR2. Gene, Elsevier, 2005, 344, pp.181 - 192. ⟨10.1016/j.gene.2004.09.016⟩. ⟨hal-01925572⟩
  • Yosr Haffani, Thierry Gaude, J. Cock, Daphne Goring. Antisense suppression of thioredoxinhmRNA in Brassica napus cv.. Plant Molecular Biology, Springer Verlag (Germany), 2004, 55 (5), pp.619 - 630. ⟨10.1007/s11103-004-1126-x⟩. ⟨hal-01925575⟩
  • Peters A.F. Marie D. Scornet D. Kloareg B. And Cock J.M.. Proposal of Ectocarpus siliculosus (Ectocarpales, Phaeophyceae) as a model organism for brown algal genetics and genomics.. Journal of Phycology, Wiley, 2004, 40, pp.1079-1088. ⟨hal-00098356⟩
  • Gabrielle Tichtinsky, V. Vanoosthuyse, J.Mark Cock, Thierry Gaude. Making inroads into plant receptor kinase signalling pathways. Trends in Plant Science, Elsevier, 2003, 8 (5), pp.231-237. ⟨10.1016/S1360-1385(03)00062-1⟩. ⟨hal-03032851⟩
  • V. Vanoosthuyse, Gabrielle Tichtinsky, Christian Dumas, Thierry Gaude, J. Mark Cock. Interaction of Calmodulin, a Sorting Nexin and Kinase-Associated Protein Phosphatase with the Brassica oleracea S Locus Receptor Kinase. Plant Physiology, American Society of Plant Biologists, 2003, 133 (2), pp.919-929. ⟨10.1104/pp.103.023846⟩. ⟨hal-03032848⟩
  • Gabriel Scalliet, Noellie Journot, Frédéric Jullien, Sylvie Baudino, Jean-Louis Magnard, et al.. Biosynthesis of the major scent components 3,5-dimethoxytoluene and 1,3,5-trimethoxybenzene by novel rose O-methyltransferases. FEBS Letters, Wiley, 2002. ⟨hal-01925579⟩
  • J.Mark Cock, V. Vanoosthuyse, Thierry Gaude. Receptor kinase signalling in plants and animals: distinct molecular systems with mechanistic similarities. Current Opinion in Cell Biology, Elsevier, 2002, 14 (2), pp.230-236. ⟨10.1016/s0955-0674(02)00305-8⟩. ⟨hal-03032855⟩
  • Martine Pastuglia, Ranjan Swarup, A. Rocher, P. Saindrenan, D. Roby, et al.. Comparison of the expression patterns of two small gene families of S gene family receptor kinase genes during the defence response in Brassica oleracea and Arabidopsis thaliana. Gene, Elsevier, 2002, 282, pp.215-225. ⟨hal-02681190⟩
  • J. Mark Cock, Vincent Vanoosthuyse, Thierry Gaude. Receptor kinase signalling in plants and animals: distinct molecular systems with mechanistic similarities. Current Opinion in Cell Biology, Elsevier, 2002. ⟨hal-01926798⟩
  • Stéphanie Channelière, Stéphane Rivière, Gabriel Scalliet, Judit Szecsi, Frédéric Jullien, et al.. Analysis of gene expression in rose petals using expressed sequence tags. FEBS Letters, Wiley, 2002, 515 (1-3), pp.35-38. ⟨10.1016/s0014-5793(02)02413-4⟩. ⟨hal-03086430⟩
  • Vincent Vanoosthuyse, Christine Miege, Christian Dumas, J. Cock. Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response. Plant Molecular Biology Reporter, Springer Verlag, 2001, 16, pp.17 - 34. ⟨hal-01926539⟩
  • C. Miege, V. Ruffio-Châble, M.H. Schierup, D. Cabrillac, C. Dumas, et al.. Intrahaplotype polymorphism at the Brassica S locus. Genetics, Genetics Society of America, 2001, 159, pp.811-822. ⟨hal-02674927⟩
  • Maria Mazzurco, Waheeda Sulaman, Helen Elina, J. Cock, Daphne Goring. Further analysis of the interactions between the Brassica S receptor kinase and three interacting proteins (ARC1, THL1 and THL2) in the yeast two-hybrid system. Plant Molecular Biology Reporter, Springer Verlag, 2001, 45, pp.365 - 376. ⟨hal-01926525⟩
  • Didier Cabrillac, J. Mark Cock, Christian Dumas, Thierry Gaude. The S-locus receptor kinase is inhibited by thioredoxins and activated by pollen coat proteins. Nature, Nature Publishing Group, 2001, 410, pp.220-223. ⟨10.1038/35065626⟩. ⟨hal-01925586⟩
  • V. Vanoosthuyse, Christine Miege, Christian Dumas, J. Mark Cock. Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response.. Plant Molecular Biology Reporter, Springer Verlag, 2001, 46 (1), pp.17-34. ⟨10.1023/a:1010664704926⟩. ⟨hal-02347421⟩
  • J. Mark Cock, Sheila Mccormick. A Large Family of Genes That Share Homology with CLAVATA3. Plant Physiology, American Society of Plant Biologists, 2001. ⟨hal-01925591⟩
  • Jean-Loïc Giranton, Christian Dumas, J. Mark Cock, Thierry Gaude. The integral membrane S-locus receptor kinase of Brassica has serinethreonine kinase activity in a membranous environment and spontaneously forms oligomers in planta. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2000, 97 (7), pp.3759-3764. ⟨10.1073/pnas.97.7.3759⟩. ⟨hal-01926568⟩
  • M.J. Cock, D. Cabrillac, J.L. Giranton, Martine Pastuglia, V. Ruffio-Châble, et al.. Investigating the molecular mechanism of the self-incompatility response in Brassica. Annals of Botany, Oxford University Press (OUP), 2000, 85 (sp.), n.p. ⟨hal-02695604⟩
  • Didier Cabrillac, Valérie Delorme, Jérôme Garin, Véronique Ruffio-Châble, Jean-Loïc Giranton, et al.. The S 15 Self-Incompatibility Haplotype in Brassica oleracea Includes Three S Gene Family Members Expressed in Stigmas. The Plant cell, American Society of Plant Biologists (ASPB), 1999, 11, pp.971 - 986. ⟨10.1105/tpc.11.5.971⟩. ⟨hal-01926532⟩
  • J.L. Giranton, Eugénie Passelègue, C. Dumas, J.M. Cock, Thierry Gaude. Membrane proteins involved in pollen-pistil interactions. Biochimie, Elsevier, 1999, 81 (6), pp.675-680. ⟨hal-02691706⟩
  • D. Cabrillac, Valérie Delorme, J. Garin, V. Ruffio-Châble, J.L. Giranton, et al.. The S15 self-incompatibility haplotype in Brassica oleracea includes three S gene family members expressed in stigmas. The Plant cell, American Society of Plant Biologists (ASPB), 1999, 11, pp.971-986. ⟨hal-02690817⟩
  • C. Miege, C. Dumas, J.M. Cock. Identification of a gene linked to the Brassica S (self-incompatiility) locus by differential display. Comptes rendus de l’Académie des sciences. Série III, Sciences de la vie, Elsevier, 1999, 322, pp.1-10. ⟨hal-02693712⟩
  • Christine Miege, Christian Dumas, J. Cock. Identification of a gene linked to the Brassica S (self-incompatibility) locus by differential display. CRAS Compte Rendu Académie des Sciences, Academie des sciences, 1999. ⟨hal-01926536⟩
  • Robert R. Schmidt, J. Mark Cock. Cell cycle regulation of expression of nuclear gene(s) encoding chloroplastic, ammonium-inducible glutamate dehydrogenases in Chlorella sorokiniana.. Cell and Tissue Kinetics, 1998. ⟨hal-03086451⟩
  • J.L. Giranton, Martine Pastuglia, C. Dumas, Thierry Gaude, J.M. Cock. The molecular mechanism of self-incompatibility in Brassica: recent advances. Acta Agronomica Hungarica, Akadémiai Kiadó, 1998, 46 (4), pp.431-438. ⟨hal-02693667⟩
  • Martine Pastuglia, Véronique Ruffio-Châble, Valérie Delorme, Thierry Gaude, Christian Dumas, et al.. A functional S locus anther gene is not required for the self-incompatibility response in Brassica oleracea.. The Plant cell, American Society of Plant Biologists (ASPB), 1997, 9 (11), pp.2065-2076. ⟨10.1105/tpc.9.11.2065⟩. ⟨hal-01926573⟩
  • Martine Pastuglia, Dominique Roby, Christian Dumas, J. Mark Cock. Rapid lnduction by Wounding and Bacterial Infection of an S Gene Family Receptor-like Kinase Gene in Brassica oleracea. The Plant cell, American Society of Plant Biologists (ASPB), 1997, 9, pp.49-60. ⟨10.1105/tpc.9.1.49⟩. ⟨hal-01926645⟩
  • J.M. Cock, Ranjan Swarup, C. Dumas. Natural antisense transcripts of the S locus receptor kinase gene and related sequences in Brassica oleracea. Molecular and General Genetics MGG, Springer Verlag, 1997, 255, pp.514-524. ⟨hal-02698185⟩
  • Martine Pastuglia, D. Roby, C. Dumas, J.M. Cock. Rapid induction by wounding and bacterial infection of an S gene family receptor-like kinase gene in Brassica oleracea. The Plant cell, American Society of Plant Biologists (ASPB), 1997, 9, pp.49-60. ⟨hal-02692178⟩
  • Ranjan Swarup, C. Dumas, J.M. Cock. A new class of receptor-like protein kinase gene from Arabidopsis thaliana possessing a domain with similarity to plant lectin genes (EMBL accession number X95909). Plant Physiology, American Society of Plant Biologists, 1996, 111, pp.347-348. ⟨hal-02689478⟩
  • Valerie Delorme, Jean-Loic Giranton, Yves Hatzfeld, Aline Friry, Philippe Heizmann, et al.. Characterization of the S locus genes, SLG and SRK, of the Brassica S3 haplotype: identification of a membrane-localized protein encoded by the S locus receptor kinase gene. Plant Journal, Wiley, 1995, 7 (3), pp.429-440. ⟨10.1046/j.1365-313x.1995.7030429.x⟩. ⟨hal-03086441⟩
  • Jean-Loïc Giranton, Maria José Ariza, Christain Dumas, J. Mark Cock, Thierry Gaude. The S locus receptor kinase gene encodes a soluble glycoprotein corresponding to the SKR extracellular domain in Brassica oleracea.. Plant Journal, Wiley, 1995, 8 (6), pp.827-834. ⟨10.1046/j.1365-313X.1995.8060827.x⟩. ⟨hal-01926654⟩
  • C. Breton, Annie Chaboud, E. Matthys-Rochon, E.E.M. Bates, J.M. Cock, et al.. PCR-generated cDNA library of transition-stage maize embryos: cloning and expression of calmodulin genes during early embryogenesis. Plant Molecular Biology, Springer Verlag (Germany), 1995, 27, pp.105-113. ⟨hal-02714706⟩
  • C. Kleman-Mariac, M. Rougier, J.M. Cock, Thierry Gaude, C. Dumas. S-locus glycoproteins are expressed along the path of pollen tubes in Brassica pistils. Planta, Springer Verlag, 1995, 196, pp.614-621. ⟨hal-02708694⟩
  • J.M. Cock, B. Stanchev, Valérie Delorme, R.R.D. Croy, C. Dumas. SLR3: a modified receptor kinase gene that has been adapted to encode a putative secreted glycoprotein similar to the S locus glycoprotein. Molecular and General Genetics MGG, Springer Verlag, 1995, 248, pp.151-161. ⟨hal-02709825⟩
  • Valérie Delorme, J.L. Giranton, Yves Hatzfeld, A. Friry, P. Heizmann, et al.. Characterization of the S locus genes, SLG and SRK, of the Brassica S3 haplotype: identification of a membrane-localized protein encoded by the S locus receptor kinase gene. Plant Journal, Wiley, 1995, 7 (3), pp.429-440. ⟨hal-02704966⟩
  • J.L. Giranton, M.J. Ariza, C. Dumas, J.M. Cock, Thierry Gaude. The S locus receptor kinase gene encodes a soluble glycoprotein corresponding to the SRK extracellular domain in Brassica oleracea. Plant Journal, Wiley, 1995, 8 (6), pp.827-834. ⟨hal-02705476⟩
  • J.M. Cock, P. Hemon, Julie Vera Cullimore. Characterization of the gene encoding the plastid-located glutamine synthetase of Phaseolus vulgaris: regulation of B-glucuronidase gene fusions in transgenic tobacco. Plant Molecular Biology, Springer Verlag (Germany), 1992, 18, pp.1141-1149. ⟨hal-02701710⟩

Conference papers8 documents

  • Philippe Potin, Zofia Nehr, Paolo Ruggeri, Komlan Avia, Stéphane Mauger, et al.. GENetic diversity exploitation of Saccharina latissima for Innovative macro-ALGal biorefinery in Europe. 23rd International Seaweed Symposium, Apr 2019, Jeju, South Korea. ⟨hal-02947585⟩
  • Zofia Nehr, Komlan Avia, Stéphane Mauger, Bertrand Jacquemin, Émilie Gouhier, et al.. Genetic Tools For The Development Of Improved Cultivars Of Saccharina latissima. 23rd International Seaweed Symposium, Apr 2019, Jeju, North Korea. ⟨hal-02947582⟩
  • Komlan Avia, Agnieszka Lipinska, Laure Mignerot, Gabriel J Montecinos, M. Jamy, et al.. Genetic diversity in the UV sex chromosomes of the brown alga Ectocarpus. GDRI Diversity, Evolution and Biotechnology of Marine algae workshop "Sex and reproduction in marine algae", Jan 2019, Roscoff, France. ⟨hal-02947586⟩
  • Komlan Avia, Susana M. Coelho, Gabriel J Montecinos, Alexandre Cormier, Fiona Lerck, et al.. QTL mapping in the model brown alga Ectocarpus. 8th annual meeting EFOR network, session " Genomic, evolution and adaptation", May 2017, Paris, France. ⟨hal-02947618⟩
  • Agnieszka Lipinska, Nicholas Toda, Svenja Heesch, Laure Mignerot, Komlan Avia, et al.. UV sex chromosome evolution in seaweeds. Population Genetics Group meeting, Jan 2017, Cambridge, United Kingdom. ⟨hal-02947589⟩
  • Komlan Avia, Susana M. Coelho, Gabriel J Montecinos, Alexandre Cormier, Fiona Lerck, et al.. QTL mapping of stress related traits in Ectocarpus. 5th annual meeting of the GDR MarCo « Marine Connectivity », Oct 2015, Montpellier, France. ⟨hal-02947466⟩
  • Komlan Avia, Susana M. Coelho, Gabriel J Montecinos, Alexandre Cormier, Fiona Lerck, et al.. QTL mapping of stress related traits in the model brown alga Ectocarpus sp. Journées phycologiques de la société phycologique de France, Sep 2015, Vannes, France. ⟨hal-02947470⟩
  • J. Mark Cock, Jonas Collen, Lieven Sterck, Pierre Rouzé, Delphine Scornet, et al.. Nature, nurture and the structure of macroalgal genomes. 5. European Phycological Congress, Sep 2011, Rhodes, Greece. ⟨hal-02749757⟩

Poster communications6 documents

  • Laure Mignerot, Komlan Avia, Rémy Luthringer, Agnieszka Lipinska, Akira F Peters, et al.. A key role for UV sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus. GDRI Diversity, Evolution and Biotechnology of Marine algae workshop "Sex and reproduction in marine algae", Jan 2019, Roscoff, France. 2019. ⟨hal-02947591⟩
  • Zofia Nehr, Ousseini Issaka-Salia, Bertrand Jacquemin, Komlan Avia, Stéphane Mauger, et al.. Towards the developpement of improved cultivars of Saccharina latissima for large-scale cultivation. Tjarno International Seaweed Conference 2018, Jun 2018, Tjarno, Sweden. 2018. ⟨hal-02947594⟩
  • Svenja Heesch, Komlan Avia, Nicholas Toda, Akira F. Peters, Pasi Rastas, et al.. Towards a genetic map for the brown alga Saccorhiza polyschides. German Botanical Society (DBG) meeting, Mar 2018, Berchtesgaden, Germany. 2018. ⟨hal-02947599⟩
  • Laure Mignerot, Rémy Luthringer, Komlan Avia, Agnieszka Lipinska, J. Mark Cock, et al.. Genetic and cellular characterization of parthenogenesis in the brown alga Ectocarpus. Jacques Monod conference "Sex uncovered: the evolutionary biology of reproductive systems", Apr 2018, Roscoff, France. 2018. ⟨hal-02947598⟩
  • J. Mark Cock, Alok Arun, Olivier Godfroy, Agnieszka Lipinska, Delphine Scornet, et al.. Characterisation of brown alga mutants indicates deep evolutionary origins of life cycle regulatory pathways. Jacques Monod conference "Sex uncovered: the evolutionary biology of reproductive systems", Apr 2018, Roscoff, France. 2018. ⟨hal-02947597⟩
  • Komlan Avia, Susana M. Coelho, Alexandre Cormier, Fiona Lercker, Stéphane Mauger, et al.. Studying temperature and salinity stresses in the model brown alga Ectocarpus sp. by QTL mapping. 5th International Conference on Quantitative Genetics, Jun 2016, Madison, United States. 2016. ⟨hal-02947471⟩

Book sections1 document

  • Julie Vera Cullimore, J.M. Cock, T.J. Daniell, Ranjan Swarup, M.J. Benett. Inducibility of the glutamine synthetase gene family of Phaseolus vulgaris L.. Society for Experimental Biology Seminar series 49, Cambridge University Press, 1992. ⟨hal-02846612⟩

Preprints, Working Papers, ...1 document

  • Alok Arun, Susana Coelho, Akira Peters, Simon Bourdareau, Laurent Peres, et al.. Convergent recruitment of life cycle regulators to direct sporophyte development in two eukaryotic supergroups. 2018. ⟨hal-01925062⟩