Development of high density linkage maps in European oak for multi-objective genetic applications
Catherine Bodenes-Brezard Bodénès
,
Emilie E. Chancerel
,
Camille Lepoittevin
,
François Ehrenmann
,
Isabelle Lesur Kupin Lesur
,
et al.
IUFRO working group “Genetics of Quercus and Nothofagus” , Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès
hal-02805716v1
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Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome
Patricia P. Faivre-Rampant
,
Isabelle Lesur
,
Clément Boussardon
,
Frederique Bitton
,
Marie-Laure Martin-Magniette
,
et al.
Article dans une revue
hal-02646702v1
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The use and domestication of Theobroma cacao during the mid-Holocene in the upper Amazon
Sonia Zarrillo
,
Nilesh Gaikwad
,
Claire Lanaud
,
Terry Powis
,
Christopher Viot
,
et al.
Article dans une revue
hal-02625809v1
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Linkage and association mapping for two major traits used in the maritime pine breeding program: height growth and stem straightness.
Jérôme Bartholome
,
Marco Cam Bink
,
Joost van Heerwaarden
,
Emilie Chancerel
,
Christophe Boury
,
et al.
Article dans une revue
hal-02636715v1
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Discovering genes involved in ecological speciation in European white oaks using an RNAseq approach
Grégoire G. Le Provost
,
Isabelle Lesur Kupin Lesur
,
Céline C. Lalanne
,
Karine Labadie
,
Jean Marc Aury
,
et al.
Genomics and Forest Tree Genetics Conference , Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès
hal-02741267v1
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De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology
Javier Canales
,
Rocío Bautista
,
Philippe Label
,
Josefa Gómez-Maldonado
,
Isabelle Lesur Kupin Lesur
,
et al.
Article dans une revue
hal-02640932v1
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High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination
Emilie E. Chancerel
,
Jean-Baptiste J.-B. Lamy
,
Isabelle Lesur Kupin Lesur
,
Celine C. Noirot
,
Christophe C. Klopp
,
et al.
Article dans une revue
hal-00964786v1
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Oak genome sequencing and evolution
Jerome J. Salse
,
Jean Marc Aury
,
Florent Murat
,
Sébastien Faye
,
Karine Labadie
,
et al.
Genomics and Forest Tree Genetics Conference , Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès
hal-02741698v1
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Genetic analysis of oleoresin terpenoid content in maritime pine
Jérôme Bartholomé
,
Marina de Vega
,
Isabelle Lesur Kupin Lesur
,
Franck F. Salin
,
Emilie E. Chancerel
,
et al.
Genomics and Forest Tree Genetics Conference , May 2016, Arcachon, France.
, 134 p., 2016, Book of abstracts
Poster de conférence
hal-02741247v1
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Influence of landscape structure and cropping system on microbial diversity and microbial interactions in vineyards
Corinne Vacher
,
Charlie Pauvert
,
Thomas Fort
,
Marc Buée
,
Valerie Laval
,
et al.
Séminaire Pôle de Protection des Plantes (CIRAD 3P) , Nov 2018, St-Pierre de la Réunion, France
Communication dans un congrès
hal-02787591v1
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Oak stands along an elevation gradient have different molecular strategies for regulating bud phenology
Gregoire Le Provost
,
Céline Lalanne
,
Isabelle Lesur
,
Jean-Marc Louvet
,
Sylvain Delzon
,
et al.
Article dans une revue
hal-04003618v1
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How does contemporary selection shape oak phenotypes?
Hermine Alexandre
,
Laura Truffaut
,
Etienne Klein
,
Alexis A. Ducousso
,
Emilie Chancerel
,
et al.
Article dans une revue
hal-02927318v1
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Genome evolution in yeasts.
Bernard Dujon
,
David Sherman
,
Gilles Fischer
,
Pascal Durrens
,
Serge Casaregola
,
et al.
Article dans une revue
istex
hal-00104411v1
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Genetic analysis of oleoresin terpenoid content in maritime pines
Jérôme Bartholomé
,
Marina de Vega
,
Isabelle Lesur Kupin Lesur
,
Franck F. Salin
,
Emilie E. Chancerel
,
et al.
Genomics and Forest Tree Genetics Conference , May 2016, Arcachon, France.
, 2016, Abstract Book
Poster de conférence
hal-02743607v1
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Genomic landscape of the global oak phylogeny
Andrew Hipp
,
Paul Manos
,
Marlene Hahn
,
Michael Avishai
,
Catherine Bodénès
,
et al.
Article dans une revue
hal-03162542v1
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Bioinformatics matters: The accuracy of plant and soil fungal community data is highly dependent on the metabarcoding pipeline
Charlie Pauvert
,
Marc Buée
,
Valerie Laval
,
Véronique Edel-Hermann
,
Laure Fauchery
,
et al.
Article dans une revue
hal-02627344v1
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Implication of the suberin pathway in adaptation to waterlogging and hypertrophied lenticels formation in pedunculate oak (Quercus robur L.)
Grégoire Le Provost
,
Isabelle Lesur Kupin
,
Céline Lalanne
,
Corinne da Silva
,
Karine Labadie
,
et al.
Article dans une revue
hal-01602423v1
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A Chromosome-level genome assembly of the European Beech (Fagus sylvatica) reveals anomalies for organelle DNA integration, repeat Content and distribution of SNPs
Bagdevi Mishra
,
Bartosz Ulaszewski
,
Joanna Meger
,
Jean-Marc Aury
,
Catherine Bodénès
,
et al.
Article dans une revue
hal-03602006v1
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Genome-wide evolutionary response of European oaks since the Little Ice Age
Dounia Saleh
,
Jun Chen
,
Jean-Charles Leplé
,
Thibault Leroy
,
Laura Truffaut
,
et al.
2021
Pré-publication, Document de travail
hal-03275582v1
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Genome-wide distribution of genetic diversity and linkage disequilibrium in a mass-selected population of maritime pine
Christophe Plomion
,
Emilie E. Chancerel
,
Jeffrey Endelman
,
Jean-Baptiste J.-B. Lamy
,
Eric Mandrou
,
et al.
Article dans une revue
hal-02636858v1
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Genomic resources notes accepted 1 August 2015 - 31 September 2015
. Genomic Resources Development Consortium
,
Annegret Kohler
,
Antoine Kremer
,
Grégoire G. Le Provost
,
Isabelle Lesur Kupin Lesur
,
et al.
Article dans une revue
istex
hal-02630738v1
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The genetics of water‐use efficiency in maritime pine and its relation to growth
Elisa E. Marguerit
,
Laurent Bouffier
,
Emilie E. Chancerel
,
Christophe C. Boury
,
P. Costa
,
et al.
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology: New synergies to tackle the impact of climate change in the 21st century" , Oct 2012, Helsinki, Finland. 69 p
Communication dans un congrès
hal-02749305v1
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Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.
Christophe Plomion
,
Jean-Marc Aury
,
Joëlle Amselem
,
Tina Alaeitabar
,
Valérie Barbe
,
et al.
Article dans une revue
istex
hal-01579667v1
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De novo assembly of Fagus sylvatica transcriptome based on Sanger and 454 ESTs: application in transcriptome-scale analysis of bud phenology and markers development
Isabelle Lesur Kupin Lesur
,
Grégoire G. Le Provost
,
Céline C. Lalanne
,
François Ehrenman
,
Céline Noirot
,
et al.
IUFRO working group “Genetics of Quercus and Nothofagus” , Oct 2012, Bordeaux, France. 1 p., 2012
Poster de conférence
hal-02802761v1
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Sequencing and analysis of the oak transcriptome using RNA-seq technologies
Isabelle Lesur Kupin Lesur
,
Grégoire G. Le Provost
,
Céline C. Lalanne
,
François Ehrenmann
,
Céline Noirot
,
et al.
IUFRO working group “Genetics of Quercus and Nothofagus” , Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès
hal-02806071v1
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A sample view of the pedunculate oak (Quercus robur) genome from the sequencing of hypomethylated and random genomic libraries
Isabelle Lesur
,
Jérôme J. Durand
,
Federico Sebastiani
,
Niclas Gyllenstrand
,
Catherine Bodenes-Brezard Bodénès
,
et al.
Article dans une revue
istex
hal-02644223v1
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High-density SNP assay development for genetic analysis in maritime pine (Pinus pinaster)
Christophe Plomion
,
Jérôme Bartholomé
,
Isabelle Lesur Kupin Lesur
,
Christophe C. Boury
,
Isabel Rodríguez-Quilón
,
et al.
Article dans une revue
istex
hal-02640393v1
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An integrated information system dedicated to oak genomics and genetics
Joëlle Amselem
,
Nicolas Francillonne
,
Célia Michotey
,
Thomas Letellier
,
Jean-Marc Aury
,
et al.
PAG XXVI Plant and Animal Genome Conference , Jan 2018, San Diego, United States. pp.27 slides
Communication dans un congrès
hal-01839185v1
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A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation
Isabelle Lesur Kupin Lesur
,
Alison Bechade
,
Céline C. Lalanne
,
Christophe C. Klopp
,
Céline Noirot
,
et al.
Article dans une revue
istex
hal-02640346v1
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Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand
Isabelle Lesur Kupin
,
Hermine Alexandre
,
Christophe Boury
,
Emilie Chancerel
,
Christophe Plomion
,
et al.
Article dans une revue
hal-02628743v1
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