Nombre de documents

11

CV de Hoang Son PHAM


Article dans une revue4 documents

  • Hélène Falentin, Delphine Naquin, Valentin Loux, Frédérique Barloy-Hubler, Pascal Loubière, et al.. Genome Sequence of Lactococcus lactis subsp. lactis bv. diacetylactis LD61.. Genome Announcements, American Society for Microbiology, 2014, 2 (1), pp.1. <10.1128/genomeA.01176-13>. <hal-01019560>
  • Erwan Drezen, Guillaume Rizk, Rayan Chikhi, Charles Deltel, Claire Lemaitre, et al.. GATB: Genome Assembly & Analysis Tool Box. Bioinformatics, Oxford University Press (OUP), 2014, 30, pp.2959 - 2961. <10.1093/bioinformatics/btu406>. <hal-01088571>
  • Guillaume Rizk, Dominique Lavenier, Rayan Chikhi. DSK: k-mer counting with very low memory usage. Bioinformatics, Oxford University Press (OUP), 2013, 29 (5), pp.652-653. <10.1093/bioinformatics/btt020>. <hal-00778473>
  • Dent A. Earl, Keith Bradnam, John St. John, Aaron Darling, Dawei Lin, et al.. Assemblathon 1: A competitive assessment of de novo short read assembly methods. Genome Research, Cold Spring Harbor Laboratory Press, 2011, <10.1101/gr.126599.111>. <inria-00637571>

Poster2 documents

  • Gaëtan Benoit, Dominique Lavenier, Claire Lemaitre, Guillaume Rizk. Bloocoo, a memory efficient read corrector. European Conference on Computational Biology (ECCB), Sep 2014, Strasbourg, France. ECCB 2014, 2014. <hal-01092960>
  • Erwan Drezen, Patrick Durand, Dominique Lavenier. KLAST: a new high-­performance sequence similarity search tool. Bio-IT World Conference, Apr 2014, Boston, United States. <hal-01088629>

Chapitre d'ouvrage1 document

  • Dominique Lavenier, Guillaume Rizk, Sanjay Rajopadhye. GPU accelerated RNA folding algorithm. Wen-mei W. Hwu. GPU Computing Gems, ELSEVIER, pp.560, 2011, <10.0123849888>. <hal-00637827>

Communication dans un congrès2 documents

  • Nicolas Maillet, Guillaume Collet, Thomas Vannier, Dominique Lavenier, Pierre Peterlongo. COMMET: comparing and combining multiple metagenomic datasets. IEEE BIBM 2014, Nov 2014, Belfast, United Kingdom. 2014. <hal-01080050>
  • Erwan Drezen, Dominique Lavenier. Quality metrics for benchmarking sequences comparison tools. Sérgio Campos. 9th Brazilian Symposium on Bioinformatics, BSB 2014, Oct 2014, Belo Honrizonte, Brazil. Springer, 8826, pp.144-153, Advances in Bioinformatics and Computational Biology Lecture Notes in Computer Science. <http://link.springer.com/chapter/10.1007/978-3-319-12418-6_18>. <hal-01088595>

Pré-publication, Document de travail2 documents

  • Francois Moreews, Dominique Lavenier. Seamless Coarse Grained Parallelism Integration in Intensive Bioinformatics Workflows. 2016. <hal-00908842>
  • Guillaume Chapuis, Mathilde Le Boudic-Jamin, Rumen Andonov, Hristo Djidjev, Dominique Lavenier. Parallel seed-based approach to multiple protein structure similarities detection . 2014. <hal-01093809>