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RNA synthetic biology inspired from bacteria: construction of transcription attenuators under antisense regulation

 Alexandre Dawid , Bastien Cayrol , Hervé Isambert
Physical Biology, 2009, 6 (2), pp.025007. ⟨10.1088/1478-3975/6/2/025007⟩
Article dans une revue hal-01239353v1

MIIC online: a web server to reconstruct causal or non-causal networks from non-perturbative data

 Nadir Sella , Louis Verny , Guido Uguzzoni , Séverine Affeldt , Hervé Isambert
Bioinformatics, 2018, 34 (13), pp.2311-2313. ⟨10.1093/bioinformatics/btx844⟩
Article dans une revue hal-02398954v1
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Learning clinical networks from medical records based on information estimates in mixed-type data

 Vincent Cabeli , Louis Verny , Nadir Sella , Guido Uguzzoni , Marc Verny , et al.
PLoS Computational Biology, 2020, 16 (5), pp.e1007866. ⟨10.1371/journal.pcbi.1007866⟩
Article dans une revue hal-02877302v1
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Probing complex RNA structures by mechanical force

 S. Harlepp , T. Marchal , J. Robert , J.-F. Leger , A. Xayaphoummine , et al.
European Physical Journal E: Soft matter and biological physics, 2003, 12, pp.605-615
Article dans une revue hal-00000601v1
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OHNOLOGS v2: a comprehensive resource for the genes retained from whole genome duplication in vertebrates

 Param Priya Singh , Hervé Isambert
Nucleic Acids Research, 2020, ⟨10.1093/nar/gkz909⟩
Article dans une revue hal-02398956v1

Learning causal networks with latent variables from multivariate information in genomic data

 Louis Verny , Nadir Sella , Séverine Affeldt , Param Priya Singh , Hervé Isambert
PLoS Computational Biology, 2017, 13 (10), pp.e1005662. ⟨10.1371/journal.pcbi.1005662⟩
Article dans une revue hal-04036584v1
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NeuriTES. Monitoring neurite changes through transfer entropy and semantic segmentation in bright-field time-lapse microscopy

 Arianna Mencattini , Alida Spalloni , Paola Casti , Maria Colomba Comes , Davide Di Giuseppe , et al.
Patterns, 2021, 2 (6), pp.100261. ⟨10.1016/j.patter.2021.100261⟩
Article dans une revue hal-03451129v1
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Interactive exploration of a global clinical network from a large breast cancer cohort

 Nadir Sella , Anne-Sophie Hamy , Vincent Cabeli , Lauren Darrigues , Marick Laé , et al.
npj Digital Medicine, 2022, 5, pp.113. ⟨10.1038/s41746-022-00647-0⟩
Article dans une revue hal-03871644v1
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Prediction and statistics of pseudoknots in RNA structures using exactly clustered stochastic simulations

 A. Xayaphoummine , T. Bucher , F. Thalmann , H. Isambert
Proceedings of the National Academy of Sciences of the United States of America, 2003, 100, pp.15310-15315
Article dans une revue hal-00000641v1

A Nanostructure Made of a Bacterial Noncoding RNA

 Bastien Cayrol , Claude Nogues , Alexandre Dawid , Irit Sagi , Pascal Silberzan , et al.
Journal of the American Chemical Society, 2009, 131 (47), pp.17270-6. ⟨10.1021/ja906076e⟩
Article dans une revue hal-01239348v1
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3off2: A network reconstruction algorithm based on 2-point and 3-point information statistics

 Séverine Affeldt , Louis Verny , Hervé Isambert
BMC Bioinformatics, 2016, 17 (S2), pp.149-165. ⟨10.1186/s12859-015-0856-x⟩
Article dans une revue hal-01260480v1
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Optical diffraction of stretched lacunary spring networks

 Pascal Monceau , Jean-Claude Lévy , Hervé Isambert , Denise Berger
Journal de Physique I, 1993, 3 (9), pp.1891-1899. ⟨10.1051/jp1:1993219⟩
Article dans une revue istex jpa-00246837v1
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Constraint-based Causal Structure Learning with Consistent Separating Sets

 Honghao Li , Vincent Cabeli , Nadir Sella , Hervé Isambert
33rd Conference on Neural Information Processing Systems (NeurIPS 2019), Dec 2019, Vancouver, Canada
Communication dans un congrès hal-02416604v1

Learning interpretable causal networks from very large datasets, application to 400,000 medical records of breast cancer patients

 Marcel da Câmara Ribeiro-Dantas , Honghao Li , Vincent Cabeli , Louise Dupuis , Franck Simon , et al.
2023
Pré-publication, Document de travail hal-04047794v1
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Membrane reshaping by micrometric curvature sensitive septin filaments

 Alexandre Beber , Cyntia Taveneau , Manuela Nania , Feng-Ching Tsai , Aurélie Di Cicco , et al.
Nature Communications, 2019, 10 (1), pp.420. ⟨10.1038/s41467-019-08344-5⟩
Article dans une revue hal-02045879v1
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Channels Mutations in calmodulin-binding domains of TRPV4/6 channels confer invasive properties to colon adenocarcinoma cells

 Atousa Arbabian , Mircea Iftinca , Christophe Altier , Param Priya Singh , Hervé Isambert , et al.
Channels, 2020, 14 (1), pp.101-109. ⟨10.1080/19336950.2020.1740506⟩
Article dans une revue hal-02533275v1

Undulation instability of lipid membranes under an electric field

 Pierre Sens , Hervé Isambert
Physical Review Letters, 2002, 88, pp.128102
Article dans une revue hal-00117534v1
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Identification of Ohnolog Genes Originating from Whole Genome Duplication in Early Vertebrates, Based on Synteny Comparison across Multiple Genomes

 Param Priya Singh , Jatin Arora , Hervé Isambert
PLoS Computational Biology, 2015, 11 (7), pp.e1004394. ⟨10.1371/journal.pcbi.1004394⟩
Article dans une revue hal-01236668v1
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Inferring Gene Networks in Bone Marrow Hematopoietic Stem Cell-Supporting Stromal Niche Populations

 Christophe Desterke , Laurence Petit , Nadir Sella , Nathalie Chevallier , Vincent Cabeli , et al.
iScience, 2020, 23 (6), pp.101222. ⟨10.1016/j.isci.2020.101222⟩
Article dans une revue hal-02872063v1
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