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89

Curriculum Vitae Hervé Acloque


 

PERSONALINFORMATION

 Family name, First name: ACLOQUE Hervé

 Researcher unique identifier(s): http:/orcid.org/0000-0003-4761-1055

 Date of birth: 28th of February, 1976

 Nationality: French

 https://www.researchgate.net/profile/Herve_Acloque

  

 EDUCATION

 2004                PhD in Life Sciences obtained April 30th, 2004 (Ph.D. supervisor: Pr. Jacques Samarut)

                         Ecole Normale Supérieure de Lyon, UMR5665, Laboratoire de Biologie Moléculaire et Cellulaire, France

                  

 CURRENTPOSITION

 2018 – present  INRA, Senior Scientist UMR1313 GABI, team Genetic, Immunity, Animal Health

 
 

 PREVIOUS POSITIONS

 2015 – 2019     INRA, Principal Investigator at the UMRS935 ESTeam, Models of malignant and therapeutic stem cells, Villejuif, France

 2010 – 2018     INRA, Senior Scientist (Chargé de Recherche 1ere classe), UMR1388 GenPhySE, CYTOGENE team, Toulouse, France

 2004 – 2009     Post-doctoral Fellow. Developmental Neurobiology Dpt., Instituto de Neurociencias de Alicante, CSIC, Team of Pr. Angela Nieto, Spain

 2009                Visiting Scientist. Anatomy and Developmental Biology Dpt., University College of London, Team of Pr. Claudio Stern, UK

 1999 – 2004    PhD Fellow. Laboratory of Molecular and Cellular Biology, Ecole Normale Supérieure de Lyon, Team of Pr. Jacques Samarut, France

 1998-1999       Graduate Student (M.Sc) Department of Animal Physiology, Laboratory of Developmental Biology and Biotechnology, INRA, Team of Pr. Jean Paul Renard, Jouy en Josas, France

                       

TEACHING ACTIVITIES

2012 – 2014    Master program (16h) – Developmental and Cellular Biology, Toulouse University, France

2008 – 2009     PhD program (20h) – Developmental Biology, University Miguel Hernandez, Instituto de Neurociencias, Spain

2002 – 2003    Supply Teacher (60h) – General Biology, Lyon University, France

 

 INSTITUTIONALRESPONSIBILITIES

 2019-present    Nominated member of the Scientific Advisory Board of the INRA Animal Physiology and Livestock Systems (PHASE) Division

 2017-present    Elected member of the Scientific Advisory Board of the INRA Animal Genetics Division

 2017 – presentMember of the Ethical Committee CEEA26

 2012presentGraduateStudentAdvisor (PhD committee): 7 PhD students from Lyon University (Stem Cells and Brain Research Institute), 3 PhD students from Toulouse University (Center for Integrative Biology, GenPhySE) and one from Paris-Saclay University (UMR935)

 2014               Head of the CYTOGENE team composed of 7 permanent scientists, 7 technicians and engineers, 5 PhD students, post-docs and undergraduate students and a facility (4 people) for cytogenetic diagnostics in livestock species.

 2012               Member of the scientific Committee for the restructuration of an experimental unit dedicated to pig reproduction and genetics

 


Journal articles40 documents

  • Jérôme Artus, Isabelle Hue, Hervé Acloque. Preimplantation development in ungulates: a 'ménage à quatre' scenario. Reproduction, BioScientifica, 2020, ⟨10.1530/REP-19-0348⟩. ⟨hal-02912034⟩
  • Eva Hadadi, William Taylor, Xiao-Mei Li, Yetki Aslan, Marthe Villote, et al.. Chronic circadian disruption modulates breast cancer stemness and immune microenvironment to drive metastasis in mice. Nature Communications, Nature Publishing Group, 2020, 11 (1), pp.3193. ⟨10.1038/s41467-020-16890-6⟩. ⟨inserm-02907177⟩
  • Romain Feron, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, et al.. Characterization of a Y‐specific duplication/insertion of the anti‐Mullerian hormone type II receptor gene based on a chromosome‐scale genome assembly of yellow perch, Perca flavescens. Molecular Ecology Resources, Wiley/Blackwell, 2020, pp.1-13. ⟨10.1111/1755-0998.13133⟩. ⟨hal-02623895⟩
  • Sarah Pagliaro, Christoph Desterke, Herve Acloque, Jean Chomel, Lucas de Souza, et al.. Single-cell transcriptome in chronic myeloid leukemia: pseudotime analysis reveals evidence of embryonic and transitional stem cell states. Experimental Hematology, Elsevier, 2020, 85, pp.47 - 56. ⟨10.1016/j.exphem.2020.04.005⟩. ⟨hal-02912031⟩
  • Alain Ducos, Bertrand Bed'Hom, Hervé Acloque, Bertrand Pain. Modifications ciblées des génomes : Apports et impacts potentiels des nouvelles technologies pour les espèces aviaires. Bulletin de l'Académie Vétérinaire de France, Académie vétérinaire de France, A paraître, ⟨10.3406/bavf.2020.70900⟩. ⟨hal-02912741v2⟩
  • Maria Michela Pallotta, Vincenza Barbato, Alain Pinton, Hervé Acloque, Roberto Gualtieri, et al.. In vitro exposure to CPF affects bovine sperm epigenetic gene methylation pattern and the ability of sperm to support fertilization and embryo development.. Environmental and Molecular Mutagenesis, Wiley-Blackwell, 2019, ⟨10.1002/em.22242⟩. ⟨hal-02628071⟩
  • Elisabetta Giuffra, Christopher K. Tuggle, A.L. Archibald, Hervé Acloque, Amanda J. Chamberlain, et al.. Functional Annotation of Animal Genomes (FAANG) : Current Achievements and Roadmap. Annual Review of Animal Biosciences, Annual Reviews, 2019, 7 (1), pp.65-88. ⟨10.1146/annurev-animal-020518-114913⟩. ⟨hal-02626183⟩
  • Sylvain Foissac, Sarah Djebali, Kylie Munyard, Nathalie Vialaneix, Andrea Rau, et al.. Multi-species annotation of transcriptome and chromatin structure in domesticated animals. BMC Biology, BioMed Central, 2019, 17 (1), pp.108. ⟨10.1186/s12915-019-0726-5⟩. ⟨hal-02437599⟩
  • Eva Hadadi, L.E.B. de Souza, Annelise Bennaceur-Griscelli, Hervé Acloque. Identification of valid reference genes for circadian gene-expression studies in human mammary epithelial cells. Chronobiology International, Taylor & Francis, 2018, 35 (12), pp.1689-1701. ⟨10.1080/07420528.2018.1508151⟩. ⟨hal-02621939⟩
  • Hervé Acloque, O.H. Ocana, D. Abad, Cd Stern, M.A. Nieto. Snail2 and Zeb2 repress P-cadherin to define embryonic territories in the chick embryo. Development (Cambridge, England), Company of Biologists, 2017, 144 (4), pp.649-656. ⟨10.1242/dev.142562⟩. ⟨hal-01604993⟩
  • Kévin Muret, Christophe Klopp, Valentin Wucher, Diane Esquerré, Fabrice Legeai, et al.. Long noncoding RNA repertoire in chicken liver and adipose tissue. Genetics Selection Evolution, BioMed Central, 2017, 49 (1), pp.6. ⟨10.1186/s12711-016-0275-0⟩. ⟨hal-01431420⟩
  • Alain Ducos, Bertrand Bed'Hom, Hervé Acloque, Bertrand Pain. Modifications ciblées des génomes : Apports et impacts pour les espèces d’élevage. INRA Productions Animales, Paris: INRA, 2017, 30 (1), pp.3-18. ⟨hal-01608724⟩
  • Harmonie Barasc, Annabelle Congras, Nicolas Mary, Lidwine Trouilh, Valentine Marquet, et al.. Erratum to: Meiotic pairing and gene expression disturbance in germ cells from an infertile boar with a balanced reciprocal autosome-autosome translocation. Chromosome Research, Springer Verlag, 2016, 24 (4), pp.529-530. ⟨10.1007/s10577-016-9534-8⟩. ⟨hal-01602405⟩
  • Harmonie Barasc, Annabelle Congras, Nicolas Mary, Lidwine Trouilh, Valentine Marquet, et al.. Meiotic pairing and gene expression disturbance in germ cells from an infertile boar with a balanced reciprocal autosome-autosome translocation. Chromosome Research, Springer Verlag, 2016, 24 (4), pp.511-527. ⟨10.1007/s10577-016-9533-9⟩. ⟨hal-01602415⟩
  • Annabelle Congras, Harmonie Barasc, Kamila Canale-Tabet, Florence Plisson-Petit, Chantal Delcros, et al.. Non integrative strategy decreases chromosome instability and improves endogenous pluripotency genes reactivation in porcine induced pluripotent-like stem cells. Scientific Reports, Nature Publishing Group, 2016, 6, Non paginé. ⟨10.1038/srep27059⟩. ⟨hal-02633904⟩
  • Christopher K. Tuggle, Elisabetta Giuffra, Stephen N. White, Laura Clarke, Huaijun Zhou, et al.. GO-FAANG meeting: a Gathering On Functional Annotation of Animal Genomes. Animal Genetics, Wiley-Blackwell, 2016, 47 (5), pp.528-533. ⟨10.1111/age.12466⟩. ⟨hal-02635619⟩
  • Pierre Osteil, Anaïs Moulin, Claire Santamaria, Thierry Joly, Luc Jouneau, et al.. A panel of embryonic stem cell lines reveals the variety and dynamic of pluripotent states in rabbits. Stem Cell Reports, Elsevier, 2016, 7 (3), pp.383-398. ⟨10.1016/j.stemcr.2016.07.022⟩. ⟨hal-02639328⟩
  • Hongwei Chen, Irène Aksoy, Fabrice Gonnot, Pierre Osteil, Maxime Aubry, et al.. Reinforcement of STAT3 activity reprogrammes human embryonic stem cells to naive-like pluripotency. Nature Communications, Nature Publishing Group, 2015, 6 (1), ⟨10.1038/ncomms8095⟩. ⟨hal-01997120⟩
  • Annabelle Congras, Harmonie Barasc, Chantal Delcros, Mireille Vignoles, Alain Pinton, et al.. 330 Derivation of porcine induced pluripotent stem cells from fibroblasts of a translocated azoospermic boar. Reproduction, Fertility and Development, CSIRO Publishing, 2015, 27 (1), pp.254-254. ⟨10.1071/RDv27n1Ab330⟩. ⟨hal-02629932⟩
  • Nicolas Mary, Harmonie Barasc, Stephane Ferchaud, Yvon Billon, Frederic Meslier, et al.. Meiotic recombinaison analyses of individual chromosomes in male domestic pigs (sus scrofa domestica). PLoS ONE, Public Library of Science, 2014, 9 (6), pp.Non Paginé. ⟨10.1371/journal.pone.0099123⟩. ⟨hal-02634784⟩
  • Annabelle Congras, Martine Yerle-Bouissou, Alain Pinton, Florence Vignoles, Laurence Liaubet, et al.. Sperm DNA Methylation Analysis in Swine Reveals Conserved and Species-Specific Methylation Patterns and Highlights an Altered Methylation at the GNAS Locus in Infertile Boars. Biology of Reproduction, Society for the Study of Reproduction, 2014, 91 (6), pp.1-14. ⟨10.1095/biolreprod.114.119610⟩. ⟨hal-02636581⟩
  • Sophie Blanc, Florence Ruggiero, Anne-Marie Birot, Hervé Acloque, Didier Decimo, et al.. Subcellular Localization of ENS-1/ERNI in Chick Embryonic Stem Cells. PLoS ONE, Public Library of Science, 2014, 9 (3), pp.e92039. ⟨10.1371/journal.pone.0092039⟩. ⟨hal-02096948⟩
  • Herve Acloque, Amelie Bonnet-Garnier, Florence Mompart, Alain Pinton, Martine Yerle-Bouissou. Sperm nuclear architecture is locally modified in presence of a Roberstsonian translocation t(13;17). PLoS ONE, Public Library of Science, 2013, 8 (10), pp.e78005. ⟨10.1371/journal.pone.0078005⟩. ⟨hal-02645259⟩
  • Pierre Osteil, Yann Tapponnier, Suzy Markossian, Murielle Godet, Barbara Panneau, et al.. Induced pluripotent stem cells derived from rabbits exhibit some characteristics of naïve pluripotency. Biology Open, Royal Society, 2013, 2 (6), pp.613-628. ⟨10.1242/bio.20134242⟩. ⟨hal-01000957⟩
  • Oscar Ocañ, Rebeca Có, Oscar h. Ocaña, Rebeca Córcoles, Ángels Fabra, et al.. Metastatic Colonization Requires the Repression of the Epithelial-Mesenchymal Transition Inducer Prrx1. Cancer Cell, Elsevier, 2012, 22 (6), pp.709-724. ⟨10.1016/j.ccr.2012.10.012⟩. ⟨hal-02912717⟩
  • Oscar h. Ocaña, Rebeca Córcoles, Ángels Fabra, Gema Moreno-Bueno, Hervé Acloque, et al.. Metastatic Colonization Requires the Repression of the Epithelial-Mesenchymal Transition Inducer Prrx1. Cancer Cell, Elsevier, 2012, 22 (6), pp.709-724. ⟨10.1016/j.ccr.2012.10.012⟩. ⟨hal-02912713⟩
  • Anne Mey, Herve Acloque, Emmanuelle Lerat, Sébastien Gounel, Violaine Tribollet, et al.. The endogenous retrovirus ENS-1 provides active binding sites for transcription factors in embryonic stem cells that specify extra embryonic tissue. Retrovirology, BioMed Central, 2012, 9 (1), ⟨10.1186/1742-4690-9-21⟩. ⟨hal-02913803⟩
  • Herve Acloque, Fabrice Lavial, Bertrand Pain. Astacin-like metallo-endopeptidase is dynamically expressed in embryonic stem cells and embryonic epithelium during morphogenesis. Developmental Dynamics, Wiley, 2012, 241 (3), pp.574-582. ⟨10.1002/dvdy.23737⟩. ⟨hal-02651120⟩
  • Herve Acloque, Oscar Ocana, M Angela Nieto. Mutual exclusion of transcription factors and cell behaviour in the definition of vertebrate embryonic territories. Current Opinion in Genetics and Development, Elsevier, 2012, 22 (4), pp.308-314. ⟨10.1016/j.gde.2012.03.004⟩. ⟨hal-02649636⟩
  • A. Mey, H. Acloque, Emmanuelle Lerat, S. Gounel, V. Tribollet, et al.. The endogenous retrovirus ENS-1 provides active binding sites for transcription factors in embryonic stem cells that specify extra embryonic tissue. Retrovirology, 2012, 9, pp.21. ⟨10.1186/1742-4690-9-21⟩. ⟨hal-02289815⟩
  • Herve Acloque, Oscar H. Ocana, Ander Matheu, Karine Rizzoti, Clare Wise, et al.. Reciprocal Repression between Sox3 and Snail Transcription Factors Defines Embryonic Territories at Gastrulation. Developmental Cell, Elsevier, 2011, 21 (3), pp.546-558. ⟨10.1016/j.devcel.2011.07.005⟩. ⟨hal-02650200⟩
  • Fabrice Lavial, Hervé Acloque, Elodie Bachelard, M. Angela Nieto, Jacques Samarut, et al.. Ectopic expression of Cvh (Chicken Vasa homologue) mediates the reprogramming of chicken embryonic stem cells to a germ cell fate. Developmental Biology, Elsevier, 2009, 330 (1), pp.73-82. ⟨10.1016/j.ydbio.2009.03.012⟩. ⟨hal-02667167⟩
  • Hervé Acloque, Meghan Adams, Katherine Fishwick, Marianne Bronner-Fraser, M. Angela Nieto. Epithelial-mesenchymal transitions: the importance of changing cell state in development and disease. Journal of Clinical Investigation, American Society for Clinical Investigation, 2009, 119 (6), pp.1438-1449. ⟨10.1172/JCI38019⟩. ⟨hal-02912722⟩
  • Jean Paul Thiery, Hervé Acloque, Ruby Y.J. Huang, M. Angela Nieto. Epithelial-Mesenchymal Transitions in Development and Disease. Cell, Elsevier, 2009, 139 (5), pp.871-890. ⟨10.1016/j.cell.2009.11.007⟩. ⟨hal-02912716⟩
  • Fabrice Lavial, Hervé Acloque, Federica Bertocchini, David Macleod, Sharon Boast, et al.. The Oct4 homologue PouV and Nanog regulate pluripotency in chicken embryonic stem cells. Development (Cambridge, England), Company of Biologists, 2007, 134 (19), pp.3549-3563. ⟨hal-02664396⟩
  • M. Blanco, A. Barrallo-Gimeno, H. Acloque, A. Reyes, M. Tada, et al.. Snail1a and Snail1b cooperate in the anterior migration of the axial mesendoderm in the zebrafish embryo. Development (Cambridge, England), Company of Biologists, 2007, 134 (22), pp.4073-4081. ⟨10.1242/dev.006858⟩. ⟨hal-02912729⟩
  • & Nieto, Aixa Morales, Hervé Acloque, Oscar Ocana, Cristina de Frutos, et al.. Snail genes at the crossroads of symmetric and asymmetric processes in the developing mesoderm. EMBO Reports, EMBO Press, 2006, 8 (1), pp.104-109. ⟨10.1038/sj.embor.7400867⟩. ⟨hal-02912731⟩
  • Hervé Acloque, Anne Mey, A.M. Birot, H. Gruffat, Bertrand Pain, et al.. Transcription factor cCP2 controls gene expression in chicken embryonic stem cells. Nucleic Acids Research, Oxford University Press, 2004, 32 (7), pp.2259-2271. ⟨hal-02678518⟩
  • Hervé Acloque, V. Risson, M.A. Birot, R. Kutina, B. Pain, et al.. Identification of a new gene family specifically expressed in chicken embryonic stem cells and early embryo. Mechanisms of Development, Elsevier, 2001, 103, pp.79-91. ⟨hal-02673602⟩
  • H. Acloque, Valérie Risson, Anne Marie Birot, B. Pain, Jacques Samarut. Identification of a new gene family specifically expressed in chicken embryonic stem cells and early embryo.. Mechanisms of Development, Elsevier, 2001, 103, pp.79-91. ⟨hal-00023833⟩

Conference papers24 documents

  • Sarah Djebali Quelen, Sylvain Foissac, Nathalie Vialaneix, Kylie Munyard, Andrea Rau, et al.. Chromatin accessibility conservation across four livestock species. Conference of the International Society for Animal Genetics (ISAG 2019), Jul 2019, Llieda, Spain. ⟨hal-02788732⟩
  • Sylvain Foissac, Sarah Djebali, Kylie Munyard, Nathalie Vialaneix, Andrea Rau, et al.. Functional annotation of livestock genomes: chromatin structure and regulation of gene expression. ASAS/ASDS Midwest Joint Meeting, Mar 2019, Omaha, United States. ⟨10.1093/jas/skz122.028⟩. ⟨hal-02735898⟩
  • Frédéric Jehl, Kévin Muret, Maria Bernard, Diane Esquerré, Hervé Acloque, et al.. An atlas of chicken long non-coding RNAs gathering multiple sources : gene models and expression across more than twenty tissues. PAG XXVII - Plant & Animal Genome Conference, Jan 2019, San Diego, United States. ⟨hal-02790912⟩
  • Sylvain Foissac, Sarah Djebali Quelen, Nathalie Vialaneix, Matthias Zytnicki, Andrea Rau, et al.. Multi-level conservation of chromosome conformation across livestock species reveals evolutionary links between genome structure and function. Conference of the International Society for Animal Genetics (ISAG 2019), Jul 2019, Lleida, Spain. ⟨hal-02788476⟩
  • Sarah Pagliaro, Christophe Desterke, Hervé Acloque, Annelise Bennaceur-Griscelli, Ali G. Turhan. Single cell transcriptome in chronic myeloid leukemia (cml): pseudotime analysis reveals a rare population with embryonic stem cell features and druggable intricated transitional stem cell states. 60th Annual Meeting of the American-Society-of-Hematology (ASH), American Society of Hematology (ASH). USA., Dec 2018, San Diego, United States. pp.3, ⟨10.1182/blood-2018-99-110679⟩. ⟨hal-02733753⟩
  • Alain Pinton, Anne Calgaro, Nicolas Mary, Harmonie Barasc, Nathalie Bonnet, et al.. Meiotic and gene expression analyses in a case of t(1;15) azoospermic boar. 23. International Colloquium on Animal Cytogenetics and Genomics (23 ICACG), Jun 2018, Saint-Pétersburg, Russia. 360 p. ⟨hal-02737986⟩
  • Hervé Acloque, Yoann Bailly, Sarah Djebali, Stephane Ferchaud, Doryan Grivault, et al.. Analyse transcriptomique cellule-unique pour définir les populations cellulaires pluripotentes et extra-embryonnaires et leurs interactions dans le blastocyste porcin. Journées Scientifiques du Département de Génétique Animale, Oct 2018, Dienné, France. 1 p. ⟨hal-02786299⟩
  • Elisabetta Giuffra, H. Acloque, Giorgia Egidy Maskos, Nico Taverne, Anya Taverne-Thiele, et al.. Generating 3D organoid-like structures from porcine induced pluripotent-like cells in vitro.. 11. Symposium of the French Domestic Animal Immunology Network,, Mar 2018, Tours, France. ⟨hal-02918626⟩
  • Sylvain Foissac, Sarah Djebali Quelen, Hervé Acloque, Marie-Helene Pinard - van der Laan, Sandrine Lagarrigue, et al.. Profiling the landscape of transcription and chromatin conformation reveals regulatory mechanisms involved in immune and metabolic functions. 3. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2017, Jouy-en-Josas, France. ⟨hal-01603057⟩
  • Maria Eugenia Marti Marimon, Hervé Acloque, Matthias Zytnicki, David Robelin, Sarah Djebali Quelen, et al.. Characterization of 3D genomic interactions in fetal pig muscle. 36. International Society for Animal Genetics Conference (ISAG), Jul 2017, Dublin, Ireland. pp.43. ⟨hal-02868765⟩
  • Harmonie Barasc, Annabelle Congras, Nicolas Mary, Valentine Marquet, Stephane Ferchaud, et al.. Analyse du comportement méiotique d'une translocation équilibrée réciproque autosome-autosome : une étude de cas chez le porc. 2. Réunion d'Animation épiPHASE, Institut National de Recherche Agronomique (INRA). UAR Département Physiologie Animale et Systèmes d'Elevage (0558)., Mar 2016, Saint-Pée-sur-Nivelle, France. ⟨hal-02801341⟩
  • Annabelle Congras, Harmonie Barasc, Valentine Marquet, Kamila Canale-Tabet, Emeline Lhuillier, et al.. Effects of balanced chromosome translocations on boar fertility and cell reprogramming. 22. International Colloquium on Animal Cytogenetics and Genomics (ICACG), Jul 2016, Toulouse, France. 116p. ⟨hal-02738753⟩
  • Yvette Lahbib Mansais, Maria Marti-Marimon, Valentin Voillet, Harmonie Barasc, Florence Mompart, et al.. 3D nuclear positioning of IGF2 alleles and trans interactions with imprinted genes in pig fetal cells. 22. International Colloquim on Animal Cytogenetics and Genomics (ICACG), Jul 2016, Toulouse, France. 116 p. ⟨hal-02743243⟩
  • Sylvain Foissac, Hervé Acloque, Florence Mompart, Diane Esquerre, David Robelin, et al.. Profiling the Nuclear Spatial Conformation of Livestock Genomes in Cell Lines and Liver Cells. PAG XXIV - Plant and Animal Genome Conference, Jan 2016, San Diego, United States. Non paginé. ⟨hal-01508146⟩
  • Sylvain Foissac, Herve Acloque, Florence Mompart, Diane Esquerre, David Robelin, et al.. Investigating the nuclear spatial conformation of livestock genomes using Hi-C. NGS'16 Genome Annotation, Apr 2016, Barcelone, Spain. ⟨hal-01581540⟩
  • Yvette Lahbib Mansais, Maria Marti-Marimon, Valentin Voillet, Harmonie Barasc, Florence Mompart, et al.. 3D nuclear positioning of IGF2 alleles and trans interactions with imprinted genes. 35. Conference of the International Society for Animal Genetics (ISAG), Jul 2016, Salt Lake City, United States. ⟨hal-02742818⟩
  • Herve Acloque. Comparison of Sperm Methylome in Fertile and Infertile Boars Carriers of DNA Translocation. PAG - Plant Animal Genome, Jan 2016, San Diego, United States. ⟨hal-02793883⟩
  • Herve Acloque. Effects of chromosomal translocations on DNA methylation and consequences on spermatogenesis in the germline of male pigs. 10. European Cytogenetics Conference - ECA -, Jul 2015, Strasbourg, France. ⟨hal-02792088⟩
  • Annabelle Congras, Martine Yerle-Bouissou, Alain Pinton, Florence Vignoles, Sylvain Foissac, et al.. Sperm DNA methylation analysis in swine reveals conserved and species-specific methylation patterns and highlights an altered methylation at the GNAS locus in infertile boars. Conference 2014 Epiconcept "Epigenetics and Periconception Environment", Oct 2014, Vilamoura, Portugal. 72 p. ⟨hal-02739006⟩
  • Harmonie Barasc, Nicolas Mary, Alain Ducos, Stephane Ferchaud, Isabelle Raymond Letron, et al.. Analysis of male infertility: a case study in pigs. 21. International Colloquium on Animal Cytogenetics and Gene mapping, Jun 2014, Ischia, Italy. ⟨10.1007/s10577-014-9435-7⟩. ⟨hal-02742348⟩
  • Yann Tapponnier, Pierre Osteil, Barbara Panneau, Luc Jouneau, Cédric Cabau, et al.. Transcriptome diversity at multi- and single-cell levels in rabbit pluripotent stem cells. 11. Annual Meeting International Society for Stem Cell Research (ISSCR), International Society of Stem Cell Research (ISSCR). INT., Jun 2013, Boston, United States. 1 p. ⟨hal-01198231⟩
  • Herve Acloque, Stephane Ferchaud, Martine Bouissou-Matet Yerle. Analyse de la méthylation de l’ADN spermatique chez des verrats à qualité de semence dégradée. 44. Journées de la Recherche Porcine, Feb 2012, Paris, France. ⟨hal-02745264⟩
  • Hervé Acloque, Amelie Bonnet-Garnier, Alain Ducos, Alain Pinton, Martine Yerle. Effects of chromosomal abnormalities on sperm nuclear architecture. 18. International Chromosome Conference, Aug 2011, Manchester, United Kingdom. Abstract, 1 page. ⟨hal-01189510⟩
  • Fabrice Lavial, Hervé Acloque, Eliane Bachelard, Guillaume Montillet, a . Nieto, et al.. Molecular control of pluripotency and germ line competency in chicken embryonic stem cells. Shanghai International Symposium on Stem Cell Research, Nov 2007, Shanghai, China. ⟨10.1038/cr.2008.196⟩. ⟨hal-02756866⟩

Poster communications18 documents

  • Florence Mompart, Yvette Lahbib Mansais, Anne Calgaro, Hervé Acloque, Martine Bouissou-Matet Yerle. Selection of cell lines for the functional validation of 3D genomic interactions by genome editing. 23. International Colloquium on Animal Cytogenetics and Genomics (23 ICACG), Jun 2018, Saint-Petersburg, Russia. Pensoft Publishers, Comparative Cytogenetics, 12 (3), 360 p., 2018, 23rd International Colloquium on Animal Cytogenetics and Genomics (23 ICACG). ⟨hal-02734307⟩
  • Sarah Djebali Quelen, Kylie Munyard, Nathalie Villa-Vialaneix, Cédric Cabau, Andrea Rau, et al.. Integrative and differential analysis of transcriptomes and chromatin accessibility regions reveals regulatory mechanisms involved in pig immune and metabolic functions. 36th International Society for Animal Genetics Conference, Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book. ⟨hal-01603033⟩
  • Maria Marti-Marimon, Hervé Acloque, Matthias Zytnicki, Sarah Djebali Quelen, Nathalie Villa-Vialaneix, et al.. Characterization of 3D genomic interactions in fetal pig muscle. 36th International Society for Animal Genetics Conference, Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book. ⟨hal-01608046⟩
  • Alain Ducos, Bertrand Bed'Hom, Herve Acloque, Bertrand Pain. Modifications ciblées des génomes: apports et impacts potentiels des nouvelles technologies pour les espèces aviaires. 12. Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, Apr 2017, Tours, France. ITAVI - Institut Technique de l'Aviculture, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 12, 2017, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras. ⟨hal-01608254⟩
  • Kévin Muret, Christophe Klopp, Valentin Wucher, Diane Esquerre, Fabrice Legeai, et al.. Une nouvelle facette du génome de poule : les genes “longs non-codants". 12. Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, Apr 2017, Tours, France. ITAVI - Institut Technique de l'Aviculture, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 2017, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras. ⟨hal-01605848⟩
  • Sylvain Foissac, Sarah Djebali Quelen, Hervé Acloque, Philippe Bardou, Fany Blanc, et al.. Profiling the landscape of transcription, chromatin accessibility and chromosome conformation of cattle, pig, chicken and goat genomes [FAANG pilot project]. 36th International Society for Animal Genetics Conference, Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book. ⟨hal-01608449⟩
  • Kévin Muret, Sarah Djebali Quelen, Thomas Derrien, Cédric Cabau, Christophe Klopp, et al.. Long-non coding RNAs repertoires in liver and two T lymphocyte cell types in four livestock species. 36. Conference of the International Society for Animal Genetics (ISAG), Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book. ⟨hal-01621915⟩
  • Yvette Lahbib Mansais, Maria Marti-Marimon, Valentin Voillet, Harmonie Barasc, Florence Mompart, et al.. 3D nuclear positioning of IGF2 alleles and trans interactions with imprinted genes in pig fetal cells. Conference on Genome Architecture in Space and Time, Jun 2016, Trieste, Italy. 2016. ⟨hal-02794242⟩
  • Harmonie Barasc, Annabelle Congras, Nicolas Mary, Lidwine Trouilh, Valentine Marquet, et al.. Meiotic pairing and gene expression disturbance in germ cells from an infertile boar with a balanced reciprocal autosome-autosome translocation. 22. International Colloquium on Animal Cytogenetics and Genomics (ICACG), Jul 2016, Toulouse, France. INRA - INP - ENVT, Chromosome Research, 24 (S1), 116 p., 2016, Chromosome Research. ⟨hal-01886399⟩
  • Kévin Muret, Christophe Klopp, Valentin Wucher, Diane Esquerre, Fabrice Legeai, et al.. Long-non coding RNAs repertoire in liver and adipose tissue in chicken. XXIV International Plant & Animal Genome (Pag), Jan 2016, San Diego, United States. 2016. ⟨hal-02799305⟩
  • Maria Marti-Marimon, Hervé Acloque, David Robelin, Matthias Zytnicki, Sarah Djebali, et al.. Construction of whole genome interaction maps and study of correlation with gene expression level in fetal muscle cells. 22. International Colloquim on Animal Cytogenetics and Genomics (ICACG), Jul 2016, Toulouse, France. INRA - INP - ENVT, Chromosome Research, 24 (S1), 116 p., 2016, 22nd International Colloquim on Animal Cytogenetics and Genomics. ⟨hal-02743692⟩
  • Alain Pinton, Anne Calgaro, Nathalie Bonnet Mouney, Nicolas Mary, Anne-Marie Loustau, et al.. Chromosomal causes of impaired reproductive performance in swine. American Association of Swine Veterinarians, Mar 2015, Orlando, United States. 2015. ⟨hal-02794386⟩
  • Eli Sellem, Jean-Philippe Perrier, Hélène Kiefer, Audrey Prezelin, Hervé Acloque, et al.. Methylation levels at the GNAS locus is not associated with field fertility in Holstein bulls. Epiconcept Workshop 2015 Periconception Environnement, Apr 2015, Dubrovnik, Croatia. COST Edition, 60 p., 2015, Epigenetics and Periconception Environment. ⟨hal-01194109⟩
  • Michèle Tixier-Boichard, Stéphane Fabre, Sophie Dhorne-Pollet, Emmanuelle Rebours, Adeline Goubil, et al.. Sampling tissue for FAANG: the example of cattle and chickens in France. GO-FAANG Workshop, Oct 2015, Washington DC, United States. 1 p., 2015. ⟨hal-02801142⟩
  • Martine Yerle-Bouissou, Yvette Lahbib Mansais, Florence Mompart, Herve Acloque, David Robelin. Arcitecture nucléaire 3D et expression du génome. Séminaire du Departement de Génétique Animale, Apr 2014, Fréjus, France. 2013. ⟨hal-02810380⟩
  • Annabelle Congras, Martine Yerle-Bouissou, Florence Vignoles, Alain Pinton, Herve Acloque. DNA methylation analysis in sperm from infertile/subfertile boars. Jacques Monod Conference, Sep 2014, Roscoff, France. 2013. ⟨hal-02803541⟩
  • Annabelle Congras, Harmonie Barasc, Florence Vignoles, Alain Pinton, Marielle Afanassieff, et al.. Derivation of induced pluripotent stem cells from an infertile boar carrying a reciprocal translocation. Conference 2014 Epiconcept "Epigenetics and Periconception Environment", Oct 2014, Vilamoura, Portugal. COST Office European Cooperation in Science and Technology (Portugal), 2014, Proceedings of the EPICONCEPT Conference 2014 - COST Action FA1201. ⟨hal-02739129⟩
  • Herve Acloque, Alain Pinton, Annabelle Congras, Florence Vignoles, Chantal Delcros, et al.. DNA methylation analysis in sperm from infertile/subfertile boars. 33. Conference of the International Society of Animal Genetics ISAG, Jul 2012, Cairns, Australia. 2012, 33rd Conference of the International Society for Animal Genetics. ⟨hal-02744773⟩

Book sections2 documents

  • Cecile Davaine, Eva Hadadi, William Taylor, Annelise Bennaceur-Griscelli, Hervé Acloque. Inducing Sequential Cycles of Epithelial-Mesenchymal and Mesenchymal-Epithelial Transitions in Mammary Epithelial Cells. The Epithelial-to Mesenchymal Transition, pp.341-351, 2021, ⟨10.1007/978-1-0716-0779-4_26⟩. ⟨hal-02950184⟩
  • Hervé Acloque, David Wilkinson, M. Angela Nieto. In Situ Hybridization Analysis of Chick Embryos in Whole-Mount and Tissue Sections. Avian Embryology, 2nd edition, pp.169-185, 2008, ⟨10.1016/S0091-679X(08)00209-4⟩. ⟨hal-02912726⟩

Directions of work or proceedings1 document

  • Herve Acloque, Oscar Ocaña, Ander Mateur, Karine Rizzoto, Clare Wise, et al.. Reciprocal repression between SOX3 and Snail transcription factors defines embryonic territories at gastrulation.. 2. Joint Meeting of the British and French Societies for Developmental Biology, Sep 2011, Nice, France. British Society for Developmental Biology, Poster 1 page, 2011. ⟨hal-02808759⟩

Preprints, Working Papers, ...3 documents

  • Isabelle Letron, Herve Acloque, Eva Hadadi, William Taylor, Xiaomei Li, et al.. Chronic circadian disruption modulates breast cancer cell stemness and their immune microenvironment to drive metastasis in mice. 2020. ⟨hal-02954790⟩
  • Romain Feron, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, et al.. Characterization of a Y-specific duplication/insertion of the anti-Mullerian hormone type II receptor gene based on a chromosome-scale genome assembly of yellow perch, Perca flavescens. 2019. ⟨hal-02790966⟩
  • Sylvain Foissac, Sarah Djebali, Kylie Munyard, Nathalie Vialaneix, Andrea Rau, et al.. Livestock genome annotation: transcriptome and chromatin structure profiling in cattle, goat, chicken and pig. 2018. ⟨hal-02791029⟩

Habilitation à diriger des recherches1 document

  • Herve Acloque. Caractérisation des propriétés souches des cellules de vertébrés : conservation et spécificité entre cellules embryonnaires et cellules tumorales. Sciences du Vivant [q-bio]. Institut National Polytechnique (Toulouse), 2015. ⟨tel-02801190⟩