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La bioinformatique avec Biopython

Olivier Dameron , Gregory Farrant
GNU/Linux Magazine, 2014, pp.13
Article dans une revue hal-01095475v1
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A Gene Island with Two Possible Configurations Is Involved in Chromatic Acclimation in Marine Synechococcus

Florian Humily , Frédéric Partensky , Christophe Six , Gregory K. Farrant , Morgane Ratin , et al.
PLoS ONE, 2013, 8 (12), pp.e84459. ⟨10.1371/journal.pone.0084459⟩
Article dans une revue hal-01218505v1
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Unusual organisation, complexity and redundancy at the Escherichia coli hcp-hcr operon promoter

David L. Chismon , Douglas F Browning , Gregory K. Farrant , Stephen J.W. Busby
Biochemical Journal, 2010, 430 (1), pp.61-68. ⟨10.1042/BJ20100623⟩
Article dans une revue hal-00506524v1
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WiseScaffolder: an algorithm for the semi-automatic scaffolding of Next Generation Sequencing data

Gregory K. Farrant , Mark Hoebeke , Frédéric Partensky , Gwendoline Andres , Erwan Corre , et al.
BMC Bioinformatics, 2015, 16 pp.281. ⟨10.1186/s12859-015-0705-y⟩
Article dans une revue hal-01193001v1
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Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria

Théophile Grébert , Hugo Doré , Frédéric Partensky , Gregory Farrant , Emmanuel Boss , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (9), pp.E2010-E2019. ⟨10.1073/pnas.1717069115⟩
Article dans une revue hal-01772758v1
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Cyanorak v2.1: a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes

Laurence Garczarek , Ulysse Guyet , Hugo Doré , Gregory Farrant , Mark Hoebeke , et al.
Nucleic Acids Research, 2021, 49 (D1), pp.D667-D676. ⟨10.1093/nar/gkaa958⟩
Article dans une revue hal-02988562v1
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Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria

Gregory K. Farrant , Hugo Doré , Francisco M. Cornejo-Castillo , Frédéric Partensky , Morgane Ratin , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (24), pp.E3365-E3374. ⟨10.1073/pnas.1524865113⟩
Article dans une revue hal-01331214v1
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Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria

Hugo Doré , Gregory Farrant , Ulysse Guyet , Julie Haguait , Florian Humily , et al.
Frontiers in Microbiology, 2020, 11, ⟨10.3389/fmicb.2020.567431⟩
Article dans une revue hal-02938656v1
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Development of a targeted metagenomic approach to study a genomic region involved in light harvesting in marine Synechococcus

Florian Humily , Gregory K. Farrant , Dominique Marie , Frédéric Partensky , Sophie Mazard , et al.
FEMS Microbiology Ecology, 2014, 88 (2), pp.231-249. ⟨10.1111/1574-6941.12285⟩
Article dans une revue hal-01100993v1
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Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum

Alaguraj Veluchamy , Xin Lin , Florian Maumus , Maximo Rivarola , Jaysheel Bhavsar , et al.
Nature Communications, 2013, 4, pp.2091. ⟨10.1038/ncomms3091⟩
Article dans une revue hal-01545322v1