Gregoire Malandain

241

Documents

Publications

	Embryo-scale epithelial buckling forms a propagating furrow that initiates gastrulation Julien Fierling , Alphy John , Barthélémy Delorme , Alexandre Torzynski , Guy B Blanchard Nature Communications, 2022, 13 (1), pp.3348. ⟨10.1038/s41467-022-30493-3⟩ Article dans une revue hal-03737695v1
	A multiscale analysis of early flower development in Arabidopsis provides an integrated view of molecular regulation and growth control Yassin Refahi , Argyris Zardilis , Gaël Michelin , Raymond Wightman , Bruno Leggio Developmental Cell, 2021, 56 (4), pp.540-556.e8. ⟨10.1016/j.devcel.2021.01.019⟩ Article dans une revue hal-03299500v1
	Contact area-dependent cell communication and the morphological invariance of ascidian embryogenesis Léo Guignard , Ulla-Maj Fiuza , Bruno Leggio , Julien Laussu , Emmanuel Faure Science, 2020, 369 (6500), pp.158. ⟨10.1126/science.aar5663⟩ Article dans une revue hal-02903409v1
	In Toto Imaging and Reconstruction of Post-Implantation Mouse Development at the Single-Cell Level Katie Mcdole , Léo Guignard , Fernando Amat , Andrew Berger , Grégoire Malandain Cell, 2018, 175 (3), pp.859 - 876.e33. ⟨10.1016/j.cell.2018.09.031⟩ Article dans une revue hal-01900416v1
	A stochastic framework to model axon interactions within growing neuronal populations Agustina Razetti , Caroline Medioni , Grégoire Malandain , Florence Besse , Xavier Descombes PLoS Computational Biology, 2018, 14 (12), pp.e1006627. ⟨10.1371/journal.pcbi.1006627⟩ Article dans une revue hal-03878043v1
	A stochastic framework to model axon interactions within growing neuronal populations Agustina Razetti , Caroline Medioni , Grégoire Malandain , Florence Besse , Xavier Descombes PLoS Computational Biology, 2018, 14 (12), pp.e1006627 Article dans une revue hal-01953244v1
	Planar cell polarity genes frizzled4 and frizzled6 exert patterning influence on arterial vessel morphogenesis Rene Markovič , Julien Peltan , Marko Gosak , Denis Horvat , Borut Žalik PLoS ONE, 2017, 12 (3), pp.e0171033. ⟨10.1371/journal.pone.0171033⟩ Article dans une revue inserm-02469561v1
	Temporal epilepsy lesions may be detected by the voxel-based quantitative analysis of brain FDG-PET images using an original block-matching normalization software Antoine Verger , Yalcin Yagdigul , Axel van Der Gucht , Sylvain Poussier , Eric Guedj Annals of Nuclear Medicine, 2016, 30 (4), pp.272-278. ⟨10.1007/s12149-016-1060-4⟩ Article dans une revue hal-01419250v1
	Age-related changes in FDG brain uptake are more accurately assessed when applying an adaptive template to the SPM method of voxel-based quantitative analysis Axel van Der Gucht , Antoine Verger , Eric Guedj , Grégoire Malandain , Gabriela Hossu Annals of Nuclear Medicine, 2015, 29 (10), pp.921-928. ⟨10.1007/s12149-015-1022-2⟩ Article dans une revue hal-01245045v1
	A tree-topology preserving pairing for 3D/2D registration Thomas Benseghir , Grégoire Malandain , Régis Vaillant International Journal of Computer Assisted Radiology and Surgery, 2015, 10 (6), pp.913-923. ⟨10.1007/s11548-015-1207-0⟩ Article dans une revue hal-01183573v1
	Assessing the ability of the 2D Fisher-KPP equation to model cell-sheet wound closure Abderrahmane Habbal , Hélène Barelli , Grégoire Malandain Mathematical Biosciences, 2014, 252, pp.45-59 Article dans une revue hal-00923588v1
	Amplitude-based data selection for optimal retrospective reconstruction in micro-SPECT Marine Breuilly , Grégoire Malandain , Julien Guglielmi , Robert Marsault , Thierry Pourcher Physics in Medicine and Biology, 2013, 58 (8), pp.2657-2674. ⟨10.1088/0031-9155/58/8/2657⟩ Article dans une revue hal-00799381v1
	Voxel-based quantitative analysis of brain images from F-18 Fluorodeoxyglucose Positron Emission Tomography with a Block-Matching algorithm for spatial normalization Christophe Person , Valérie Louis-Dorr , Sylvain Poussier , Olivier Commowick , Grégoire Malandain Clinical Nuclear Medicine, 2012, 37 (3), pp.268-273. ⟨10.1097/RLU.0b013e3182443b2d⟩ Article dans une revue hal-00651731v1
	Radiotherapy and radiology: joint efforts for modern radiation planning and practice Juliette Thariat , Pierre-Yves Marcy , A. Lacout , Liliane Ramus , T. Girinsky Diagnostic and Interventional Imaging, 2012, 93 (5), pp.342-350. ⟨10.1016/j.diii.2012.02.004⟩ Article dans une revue hal-00813871v1
	DENTALMAPS: Automatic Dental Delineation for Radiotherapy Planning in Head and Neck Cancer Juliette Thariat , Liliane Ramus , Philippe Maingon , Guillaume Odin , Vincent Grégoire International Journal of Radiation Oncology, Biology, Physics, 2011, 82 (5), pp.1858-1865 Article dans une revue inria-00616186v1
	Vers un patient numérique personnalisé pour le diagnostic et la thérapie guidés par l'image [Towards a personalized digital patient for diagnosis and therapy guided by image]. Nicholas Ayache , Olivier Clatz , Hervé Delingette , Grégoire Malandain , Xavier Pennec Médecine/Sciences, 2011, 27 (2), pp.208-13. ⟨10.1051/medsci/2011272208⟩ Article dans une revue inria-00616192v1
	Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge. Keelin Murphy , Bram van Ginneken , Joseph M. Reinhardt , Sven Kabus , Kai Ding IEEE Transactions on Medical Imaging, 2011, 30 (11), pp.1901-20. ⟨10.1109/TMI.2011.2158349⟩ Article dans une revue inserm-00607794v1
	Les mathématiques cachées de la médecine Grégoire Malandain Interstices, 2010 Article dans une revue hal-01350310v1
	[Longitudinal study of health related quality of life in multiple sclerosis: correlation with MRI parameters] M. Cohen , C. Lebrun , D Aufauvre , S. Chanalet , C Filleau-Bertogliatti Revue Neurologique, 2010, 166 (11), pp.894-900 Article dans une revue hal-00813767v1
	Outils de contourage, utilisation et construction d'atlas anatomiques : exemples des cancers de la tete et du cou Liliane Ramus , Juliette Thariat , Pierre-Yves Marcy , Yoann Pointreau , Guillaume Bera Cancer/Radiothérapie, 2010, 14 (3), pp.206-12 Article dans une revue inria-00616098v1
	Imaging plant growth in 4D : robust tissue reconstruction and lineaging at cell resolution. R. Fernandez , Pradeep Das , V. Mirabet , E. Moscardi , Jan Traas Nature Methods, 2010, 7, pp.547-553. ⟨10.1038/NMETH.1472⟩ Article dans une revue hal-00521491v1
	A pre-clinical assessment of an atlas-based automatic segmentation tool for the head and neck Richard Sims , Aurélie Isambert , Vincent Grégoire , François Bidault , Lydia Fresco Radiotherapy & Oncology, 2009, 93 (3), pp.474-8 Article dans une revue inria-00616090v1
	Revue des approches de segmentation des lésions de sclérose en plaques dans les séquences conventionnelles IRM Jean-Christophe Souplet , Christine Lebrun , Stéphane Chanalet , Nicholas Ayache , Grégoire Malandain Revue Neurologique, 2009, 165 (1), pp.7--14 Article dans une revue inria-00616091v1
	A three-dimensional histological atlas of the human basal ganglia. II. Atlas deformation strategy and evaluation in deep brain stimulation for Parkinson disease. Eric Bardinet , Manik Bhattacharjee , Didier Dormont , Bernard Pidoux , Grégoire Malandain Journal of Neurosurgery, 2009, 110 (2), pp.208-19 Article dans une revue inria-00616085v1
	An efficient locally affine framework for the smooth registration of anatomical structures Olivier Commowick , Vincent Arsigny , Aurélie Isambert , Jimena Costa , Frédéric Dhermain Medical Image Analysis, 2008, 12 (4), pp.427-41. ⟨10.1016/j.media.2008.01.002⟩ Article dans une revue inria-00616074v1
	Atlas-Based Delineation of Lymph Node Levels in Head and Neck Computed Tomography Images Olivier Commowick , Vincent Grégoire , Grégoire Malandain Radiotherapy & Oncology, 2008, 87 (2), pp.281-289 Article dans une revue inria-00616080v1
	Evaluation of an atlas-based automatic segmentation software for the delineation of brain organs at risk in a radiation therapy clinical context Aurélie Isambert , Frédéric Dhermain , F. Bidault , Olivier Commowick , Pierre-Yves Bondiau Radiotherapy & Oncology, 2008, 87 (1), pp.93-9. ⟨10.1016/j.radonc.2007.11.030⟩ Article dans une revue inria-00616079v1
	A phantom study of the accuracy of CT, MR and PET image registrations with a block matching-based algorithm Aurélie Isambert , Guillaume Bonniaud , F. Lavielle , Grégoire Malandain , Dimitri Lefkopoulos Cancer/Radiothérapie, 2008, 12 (8), pp.800-8. ⟨10.1016/j.canrad.2008.04.009⟩ Article dans une revue inria-00616066v1
	A three-dimensional, histological and deformable atlas of the human basal ganglia. I. Atlas construction based on immunohistochemical and MRI data Jérôme Yelnik , Eric Bardinet , Didier Dormont , Grégoire Malandain , Sébastien Ourselin NeuroImage, 2007, 34 (2), pp.618-38 Article dans une revue inria-00616029v1
	Model-based respiratory motion compensation for emission tomography image reconstruction Mauricio Antonio Reyes Aguirre , Grégoire Malandain , Pierre Malick Koulibaly , Miguel Ángel González Ballester , Jacques Darcourt Physics in Medicine and Biology, 2007, 52 (12), pp.3579-600 Article dans une revue inria-00616030v1
	Robust Mosaicing with Correction of Motion Distortions and Tissue Deformation for In Vivo Fibered Microscopy Tom Vercauteren , Aymeric Perchant , Grégoire Malandain , Xavier Pennec , Nicholas Ayache Medical Image Analysis, 2006, 10 (5), pp.673--692. ⟨10.1016/j.media.2006.06.006⟩ Article dans une revue inria-00163961v1
	Blockwise processing applied to brain microvascular network study Céline Fouard , Grégoire Malandain , Steffen Prohaska , Malte Westerhoff IEEE Transactions on Medical Imaging, 2006, 25 (10), pp.1319 - 1328. ⟨10.1109/TMI.2006.880670⟩ Article dans une revue hal-00308887v1
	Early detection of cognitive impairment in relapsing-remitting multiple sclerosis: functional-anatomical correlations and longitudinal follow-up Caroline Bensa , Christelle Bertogliati , Stéphane Chanalet , Grégoire Malandain , P. Bedoucha Revue Neurologique, 2006, 162 (12), pp.1221 Article dans une revue inria-00615002v1
	A low temperature embedding and section registration strategy for 3D image reconstruction of the rat brain from autoradiographic sections. Arjan W. Simonetti , Vedat A. Elezi , Régine Farion , Grégoire Malandain , Christoph Segebarth Journal of Neuroscience Methods, 2006, 158 (2), pp.242-50. ⟨10.1016/j.jneumeth.2006.06.004⟩ Article dans une revue inserm-00388981v1
	Reconstruction of Coronary Arteries from a Single Rotational X-Ray Projection Sequence Christophe Blondel , Grégoire Malandain , Régis Vaillant , Nicholas Ayache IEEE Transactions on Medical Imaging, 2006, 25 (5), pp.653--663. ⟨10.1109/TMI.2006.873224⟩ Article dans une revue inria-00614993v1
	Piecewise Affine Registration of Biological Images for Volume Reconstruction Alain Pitiot , Eric Bardinet , Paul Thompson , Grégoire Malandain Medical Image Analysis, 2006, 10 (3), pp.465--483 Article dans une revue inria-00614996v1
	Realistic Simulation of the 3D Growth of Brain Tumors in MR Images Coupling Diffusion with Mass Effect Olivier Clatz , Maxime Sermesant , Pierre-Yves Bondiau , Hervé Delingette , Simon K. K. Warfield IEEE Transactions on Medical Imaging, 2005, 24 (10), pp.1334-1346 Article dans une revue inria-00615662v1
	La tomographie en mouvement Grégoire Malandain , Mauricio Antonio Reyes Aguirre Pour la science, 2005, 338, pp.132--137 Article dans une revue inria-00615669v1
	From arteriographies to computational flow in saccular aneurisms: the INRIA experience Marc Thiriet , J.-D. Boissonnat , R. Chaine , P. Frey , Grégoire Malandain Medical Image Analysis, 2005, 9 (2), pp.133-143 Article dans une revue hal-00017614v1
	Atlas-based automatic segmentation of MR images: validation study on the brainstem in radiotherapy context Pierre-Yves Bondiau , Grégoire Malandain , Stéphane Chanalet , Pierre-Yves Marcy , Jean-Louis Habrand International Journal of Radiation Oncology, Biology, Physics, 2005, 61 (1), pp.289-98. ⟨10.1016/j.ijrobp.2004.08.055⟩ Article dans une revue inria-00615664v1
	3-D tomographic reconstruction of coronary arteries using a precomputed 4-D motion field Christophe Blondel , Régis Vaillant , Grégoire Malandain , Nicholas Ayache Physics in Medicine and Biology, 2004, 49 (11), pp.2197--2208. ⟨10.1088/0031-9155/49/11/006⟩ Article dans une revue inria-00615654v1
	The use of superresolution techniques to reduce slice thickness in functional MRI R.R. Peeters , Pierre Kornprobst , M. Nikolova , S. Sunaert , Thierry Viéville International Journal of Imaging Systems and Technology, 2004, 14 (3), pp.131--138. ⟨10.1002/ima.20016⟩ Article dans une revue inria-00615643v1
	3-D chamfer distances and norms in anisotropic grids Céline Fouard , Grégoire Malandain Image and Vision Computing, 2004, 23 (2), pp.143-158. ⟨10.1016/j.imavis.2004.06.009⟩ Article dans une revue hal-00308886v1
	The contribution of automatic anatomical matching of sequential brain MRI scans in the monitoring of multiple sclerosis lesions Christine Lebrun , David Rey , Stéphane Chanalet , Véronique Bourg , Caroline Bensa Revue Neurologique, 2004, 160 (8-9), pp.805-10 Article dans une revue inria-00615655v1
	Fusion of autoradiographs with an MR volume using 2-D and 3-D linear transformations Grégoire Malandain , Eric Bardinet , Koen Nelissen , Wim Vanduffel NeuroImage, 2004, 23 (1), pp.111--127. ⟨10.1016/j.neuroimage.2004.04.038⟩ Article dans une revue inria-00615651v1
	Traitement des images et radiothérapie Pierre-Yves Bondiau , Grégoire Malandain , Stéphane Chanalet , Pierre-Yves Marcy , C. Foa Cancer/Radiothérapie, 2004, 8 (2), pp.120--129 Article dans une revue inria-00615641v1
	Anisotropic Filtering for Model Based Segmentation of 4D Cylindrical Echocardiographic Images Johan Montagnat , Maxime Sermesant , Hervé Delingette , Grégoire Malandain , Nicholas Ayache Pattern Recognition Letters, 2003, 24 (4-5), pp.815-828. ⟨10.1016/S0167-8655(02)00184-8⟩ Article dans une revue inria-00615640v2
	Retrospective evaluation of intersubject brain registration Pierre Hellier , Christian Barillot , Isabelle Corouge , Bernard Gibaud , G. Le Goualher IEEE Transactions on Medical Imaging, 2003, 22 (9), pp.1120 - 1130. ⟨10.1109/TMI.2003.816961⟩ Article dans une revue inria-00536383v1
	Automatic three-dimensional model for protontherapy of the eye: Preliminary results Pierre-Yves Bondiau , Grégoire Malandain , Pierre Chauvel , Frédérique Peyrade , Adel Courdi Medical Physics, 2003, 30 (6), pp.1013-1020 Article dans une revue inria-00615638v1
	Computing the Diameter of a Point Set Grégoire Malandain , Jean-Daniel Boissonnat International Journal of Computational Geometry and Applications, 2002, 12 (6), pp.489--510 Article dans une revue inria-00615026v1
	Fully automatic anatomical, pathological, and functional segmentation from CT scans for hepatic surgery Luc Soler , Hervé Delingette , Grégoire Malandain , Johan Montagnat , Nicholas Ayache Computer Aided Surgery, 2001, 6 (3), pp.131-42 Article dans une revue inria-00615108v1
	Perfusion brain SPECT and Statistical Parametric Mapping analysis indicate that apathy is a cingulate syndrome: a study in Alzheimer's disease and non-demented patients Octave Migneco , M. Benoit , Pierre Malick Koulibaly , I. Dygai , Christelle Bertogliati NeuroImage, 2001, 13 (5), pp.896--902. ⟨10.1006/nimg.2000.0741⟩ Article dans une revue inria-00615625v1
	Rigid registration of 3-D ultrasound with MR images: a new approach combining intensity and gradient information. Alexis Roche , Xavier Pennec , Grégoire Malandain , Nicholas Ayache IEEE Transactions on Medical Imaging, 2001, 20 (10), pp.1038-49. ⟨10.1109/42.959301⟩ Article dans une revue cea-00333699v1
	Model-Based Detection of Tubular Structures in 3D Images Karl Krissian , Grégoire Malandain , Nicholas Ayache , Régis Vaillant , Yves Trousset Computer Vision and Image Understanding, 2000, 80 (2), pp.130--171 Article dans une revue inria-00615029v1
	An automatic virtual patient reconstruction from CT-scans for hepatic surgical planning Luc Soler , Hervé Delingette , Grégoire Malandain , Nicholas Ayache , Christophe Koehl Studies in Health Technology and Informatics, 2000, 70, pp.316-22 Article dans une revue inria-00615103v1
	Unifying maximum likelihood approaches in medical image registration Alexis Roche , Grégoire Malandain , Nicholas Ayache International Journal of Imaging Systems and Technology, 2000, 11 (1), pp.71-80 Article dans une revue cea-00333642v1
	Euclidean Skeletons Grégoire Malandain , Sara Fernández-Vidal Image and Vision Computing, 1998, 16 (5), pp.317--327 Article dans une revue inria-00615037v1
	Segmentation automatique : application aux angioscanners 3D du foie Luc Soler , Grégoire Malandain , Hervé Delingette Traitement du Signal, 1998, 15 (5), pp.411-431 Article dans une revue inria-00615033v1
	Fast Binary Image Processing Using Binary Decision Diagrams Luc Robert , Grégoire Malandain Computer Vision and Image Understanding, 1998, 72 (1), pp.1--9 Article dans une revue inria-00615038v1
	Extension of the ICP Algorithm to Nonrigid Intensity-Based Registration of 3D Volumes Jacques Feldmar , Jérôme Declerck , Grégoire Malandain , Nicholas Ayache Computer Vision and Image Understanding, 1997, 66 (2), pp.193--206. ⟨10.1006/cviu.1997.0606⟩ Article dans une revue inria-00615066v1
	X-ray angiography in stereotactic conditions: techniques and interest for interventional neuroradiology L. Picard , Eric Maurincomme , M. Soderman , Jacques Feldmar , René Anxionnat Stereotactic and Functional Neurosurgery, 1997, 68 (1-4 Pt 1), pp.117-20. ⟨10.1159/000099912⟩ Article dans une revue inria-00615078v1
	Clinical and technical requirements for proton treatment planning of ocular diseases. The SERAG (South Europe Radiotherapy Group) Pierre Chauvel , W. Sauerwein , N. Bornfeld , W. Friedrichs , N. Brassart Frontiers of Radiation Therapy and Oncology, 1997, 30, pp.133-42 Article dans une revue inria-00615067v1
	Comparison and evaluation of retrospective intermodality brain image registration techniques J. West , J.M. Fitzpatrick , M.Y. Wang , B.M. Dawant , C.R. Maurer Journal of Computer Assisted Tomography, 1997, 21 (4), pp.554-566 Article dans une revue inria-00615072v1
	A note on ''Building skeleton models via 3D medial surface-axis thinning algorithms'' Gilles Bertrand , Grégoire Malandain Graphical Models and Image Processing, 1995, 57 (6), pp.537--538 Article dans une revue inria-00615053v1
	A note on "Building skeleton models via 3-D medial surface/axis thinning algorithms" Gilles Bertrand , Grégoire Malandain Graphical Models and Image Processing, 1995, 57 (6), pp.537-538 Article dans une revue hal-00622007v1
	Mise en correspondance d'objets 3D par une approche mécanique : application aux images médicales multimodales Grégoire Malandain , Sara Fernández-Vidal , Jean-Marie Rocchisani Traitement du Signal, 1994, 11 (6), pp.541--558 Article dans une revue inria-00615052v1
	A new characterization of three-dimensional simple points Gilles Bertrand , Grégoire Malandain Pattern Recognition Letters, 1994, 15 (2), pp.169--175 Article dans une revue inria-00615050v1
	Topological segmentation of discrete surfaces Grégoire Malandain , Gilles Bertrand , Nicholas Ayache International Journal of Computer Vision, 1993, 10 (2), pp.183-197. ⟨10.1007/BF01420736⟩ Article dans une revue inria-00615046v1
	Topological segmentation of discrete surfaces Grégoire Malandain , Gilles Bertrand , Nicholas Ayache International Journal of Computer Vision, 1993, 10 2 (1), pp.183-197 Article dans une revue hal-00622102v1
	Recursive filtering and edge tracking: two primary tools for 3-D edge detection Olivier Monga , Rachid Deriche , Grégoire Malandain , Jean-Pierre Cocquerez Image and Vision Computing, 1991, 9 (4), pp.203--214. ⟨10.1016/0262-8856(91)90025-K⟩ Article dans une revue inria-00615536v1
	Automatic multidimensional segmentation of nuclear medicine images using fast recursive filters Jean-Marie Rocchisani , Olivier Monga , Rachid Deriche , Grégoire Malandain European Journal of Nuclear Medicine, 1990, 16, pp.419 Article dans une revue inria-00615535v1

	Robust Plant Cell Tracking in Fluorescence Microscopy 3D+T Series Manuel Petit , Guillaume Cerutti , Christophe Godin , Grégoire Malandain ISBI 2022 - IEEE 19th International Symposium on Biomedical Imaging, Mar 2022, Kolkata, India. pp.1-4, ⟨10.1109/ISBI52829.2022.9761521⟩ Communication dans un congrès hal-03683119v1
	3D Coronary Vessel Tree Tracking in X-Ray Projections Emmanuelle Poulain , Grégoire Malandain , Régis Vaillant FIMH 2019 - 10th Functional Imaging and Modeling of the Heart, Jun 2019, Bordeaux, France. pp.388-396, ⟨10.1007/978-3-030-21949-9_42⟩ Communication dans un congrès hal-02153710v1
	Intensity-based matching and registration for 3D correlative microscopy with large discrepancies Bertha Mayela Toledo Acosta , Xavier Heiligenstein , Grégoire Malandain , Patrick Bouthemy ISBI 2018 - IEEE 15th International Symposium on Biomedical Imaging, Apr 2018, Washington, United States. pp.493-496, ⟨10.1109/ISBI.2018.8363623⟩ Communication dans un congrès hal-01930740v1
	Coherent temporal extrapolation of labeled images Grégoire Malandain , Gaël Michelin ISBI 2017 - International Symposium on Biomedical Imaging, Apr 2017, Melbourne, Australia. pp.433 - 436, ⟨10.1109/ISBI.2017.7950554⟩ Communication dans un congrès hal-01574698v1
	Suivi temporel 3D de vaisseaux coronaires dans les projections rayons X Emmanuelle Poulain , Grégoire Malandain , Régis Vaillant GRETSI, Sep 2017, Juan-Les-Pins, France Communication dans un congrès hal-01544989v1
	3D Coronary vessel tracking in x-ray projections Emmanuelle Poulain , Grégoire Malandain , Régis Vaillant International Conference on Functional Imaging and Modeling of the Heart (FIMH), Jun 2017, Toronto, Canada. pp.204-215, ⟨10.1007/978-3-319-59448-4_20⟩ Communication dans un congrès hal-01502128v1
	Modeling collective axon growth from in vivo data reveals the importance of physical axon-axon interactions Agustina Razetti , Caroline Medioni , Grégoire Malandain , Florence Besse , Xavier Descombes Cell biology of the neuron: Polarity, plasticity and regeneration, EMBO, May 2017, Heraklion, Greece Communication dans un congrès hal-01483505v1
	Modelling collective axon growth from in vivo data reveals the importance of physical axon-axon interactions Agustina Razetti , Caroline Medioni , Grégoire Malandain , Florence Besse , Xavier Descombes Rencontre C@UCA 2017, Jun 2017, Fréjus, France Communication dans un congrès hal-01643226v1
	Spatio-temporal registration of 3D microscopy image sequences of Arabidopsis floral meristems Gaël Michelin , Yassin Refahi , Raymond Wightman , Henrik Jönsson , Jan J. Traas ISBI - International Symposium on Biomedical Imaging, Apr 2016, Prague, Czech Republic. pp.4, ⟨10.1109/ISBI.2015.7163872⟩ Communication dans un congrès hal-01606687v2
	Cell Pairings for Ascidian Embryo Registration Gaël Michelin , Léo Guignard , Ulla-Maj Fiuza , Patrick Lemaire , Christophe Godin ISBI - International Symposium on Biomedical Imaging, Institute of Electrical and Electronics Engineers (IEEE). USA., Apr 2015, New York, United States. ⟨10.1109/ISBI.2015.7163872⟩ Communication dans un congrès hal-01113166v1
	A framework for creating population specific multimodal brain atlas using clinical T1 and diffusion tensor images Vikash Gupta , Grégoire Malandain , Nicholas Ayache , Xavier Pennec MICCAI 2015 Workshop on Computational Diffusion MRI (CDMRI'15), Oct 2015, Munich, Germany. pp.99-108, ⟨10.1007/978-3-319-28588-7_9⟩ Communication dans un congrès hal-01261115v1
	Motion compensation in two-photon microscopy temporal series Caroline Medioni , Florence Besse , Xavier Descombes , Grégoire Malandain International Symposium on Biomedical Imaging (ISBI), Apr 2015, Brooklyn, United States. pp.4, ⟨10.1109/ISBI.2015.7164182⟩ Communication dans un congrès hal-01311755v1
	Quantitative comparison of micro-vasculatures Manon Linder , Cecile Duplaa , Thierry Couffinhal , Grégoire Malandain ISBI 2015 - International Symposium on Biomedical Imaging, Apr 2015, Brooklyn, United States Communication dans un congrès hal-01145908v1
	A Recursive Approach For Multiclass Support Vector Machine: Application to Automatic Classification of Endomicroscopic Videos Alexis Zubiolo , Barbara André , Eric Debreuve , Grégoire Malandain VISAPP - International Conference on Computer Vision Theory and Applications, Jan 2014, Lisbon, Portugal Communication dans un congrès hal-00905382v1
	Spatio-temporal registration of embryo images Léo Guignard , Christophe Godin , Ulla-Maj Fiuza , Lars Hufnagel , Patrick Lemaire ISBI - International Symposium on Biomedical Imaging, Apr 2014, Pekin, China Communication dans un congrès hal-00919142v1
	Head Tracking and Flagellum Tracing for Sperm Motility Analysis Huei-Fang Yang , Xavier Descombes , Sylvain Prigent , Grégoire Malandain , Xavier Druart ISBI - International Symposium on Biomedical Imaging, Apr 2014, Beijing, China. ⟨10.1109/ISBI.2014.6867871⟩ Communication dans un congrès hal-00909868v2
	Embryo Cell Membranes Reconstruction by Tensor Voting Gaël Michelin , Léo Guignard , Ulla-Maj Fiuza , Grégoire Malandain ISBI - International Symposium on Biomedical Imaging, Apr 2014, Beijing, China. ⟨10.1109/ISBI.2014.6868105⟩ Communication dans un congrès hal-00915000v2
	Iterative Closest Curve: a Framework for Curvilinear Structure Registration Application to 2D/3D Coronary Arteries Registration Thomas Benseghir , Grégoire Malandain , Régis Vaillant MICCAI - Medical Image Computing and Computer Assisted Intervention, Sep 2013, Nagoya, Japan. pp.179-186, ⟨10.1007/978-3-642-40811-3_23⟩ Communication dans un congrès hal-00833196v1
	Image-based motion detection in 4D images and application to respiratory motion suppression Marine Breuilly , Grégoire Malandain , Nicholas Ayache , Julien Guglielmi , Thierry Pourcher ISBI - International Symposium on Biomedical Imaging, Apr 2013, San Francisco, United States. pp.792-795, ⟨10.1109/ISBI.2013.6556597⟩ Communication dans un congrès hal-00799368v1
	Automatic dendrite spines detection from X-ray tomography volumes Xavier Descombes , Grégoire Malandain , Caroline Fonta , Lazlo Negyessy , Rajmund Mosko ISBI - International Symposium on Biomedical Imaging, Apr 2013, San fancisco, United States. ⟨10.1109/ISBI.2013.6556505⟩ Communication dans un congrès hal-00793573v1
	Modeling cell sheet wound closure Abderrahmane Habbal , Hélène Barelli , Grégoire Malandain Applied Mathematics, Modeling and Computational Science (AMMCS), Wilfrid Laurier University with AIMS and SIAM, Aug 2013, Waterloo, Ontario, Canada Communication dans un congrès hal-00923626v1
	Mechanical properties of the plasma membrane of micropatterned cells incubated with mono or polyunsaturated fatty acids Hélène Barelli , M. Pinot , Thierry Ferreira , Grégoire Malandain , Xavier Descombes American Society for Cell Biology (ASCB) Annual Meeting, Dec 2013, New Orleans, United States Communication dans un congrès hal-00909849v1
	Prise en compte du mouvement respiratoire du petit animal pour la reconstruction 3D TEMP synchronisée : application aux métastases péritonéales Marine Breuilly , Grégoire Malandain , Jacques Darcourt , Thierry Pourcher , Philippe R. Franken 50ème Colloque de Médecine Nucléaire de Langue Française, Apr 2012, Montpellier, France. pp.188-189, ⟨10.1016/j.mednuc.2012.02.108⟩ Communication dans un congrès hal-00759954v1
	Modeling Cell-Sheets Wound Closure Abderrahmane Habbal , Hélène Barelli , Grégoire Malandain 3rd International Conference of the Moroccan Society of Applied Mathematics (SM2A), Sep 2012, Marrakesh, Morocco Communication dans un congrès hal-00923616v1
	Simulated breath-hold reconstruction in micro-SPECT: application to peritoneal metastases expressing NIS as reporter gene Marine Breuilly , Grégoire Malandain , Nicholas Ayache , Jacques Darcourt , Thierry Pourcher MIBO - second Molecular Imaging in Biology and Oncology workshop - 2012, Jan 2012, Nice, France Communication dans un congrès hal-00759929v1
	A federated system for sharing and reuse of images and image processing tools in neuroimaging Bernard Gibaud , Farooq Ahmad , Christian Barillot , Franck Michel , Bacem Wali Computer Assisted Radiology and Surgery (CARS'11), Jun 2011, Berlin, Germany Communication dans un congrès hal-00690921v1
	NeuroLOG: A framework for the sharing and reuse of distributed tools and data in neuroimaging Michel Dojat , Mélanie Pélégrini-Issac , Farooq Ahmad , Christian Barillot , Bénédicte Batrancourt Organization for Human Brain Mapping (HBM'11), Jun 2011, Quebec, Canada Communication dans un congrès hal-00813796v1
	Diffeomorphic demons and the EMPIRE10 challenge Vincent Garcia , Tom Vercauteren , Grégoire Malandain , Nicholas Ayache Grand Challenges in Medical Image Analysis (MICCAI workshop), 2010, Beijing, China, China Communication dans un congrès inria-00616149v1
	Construction of patient specific atlases from locally most similar anatomical pieces. Liliane Ramus , Olivier Commowick , Grégoire Malandain Med Image Comput Comput Assist Interv (MICCAI), Sep 2010, China. pp.155-162 Communication dans un congrès inserm-00550024v1
	A Robust and Efficient Block Matching Framework for Non Linear Registration of Thoracic CT Images Vincent Garcia , Olivier Commowick , Grégoire Malandain Grand Challenges in Medical Image Analysis (MICCAI workshop), 2010, Beijing, China, China. pp.1-10 Communication dans un congrès inria-00616148v1
	Multi-atlas based segmentation: Application to the head and neck region for radiotherapy planning Liliane Ramus , Grégoire Malandain MICCAI Workshop Medical Image Analysis for the Clinic - A Grand Challenge, 2010, Beijing, China, China Communication dans un congrès inria-00616150v1
	Grid-wide neuroimaging data federation in the context of the NeuroLOG project. Franck Michel , Alban Gaignard , Farooq Ahmad , Christian Barillot , Bénédicte Batrancourt HealthGrid'10, Jun 2010, Paris, France. pp.112-123, ⟨10.3233/978-1-60750-583-9-112⟩ Communication dans un congrès inserm-00512799v1
	Design and use of patient-specific atlases for radiotherapy planning of the head and neck region Liliane Ramus , Souha Aouadi , Yoann Pointreau , Guillaume Bera , Yungan Tao ESTRO - 29th European Society for Therapeutic Radiology and Oncology, Sep 2010, Barcelona, Spain Communication dans un congrès hal-00813778v1
	Assessing Selection Methods in the Context of Multi-atlas Based Segmentation Liliane Ramus , Grégoire Malandain Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging 2010 (ISBI'10), 2010, Rotterdam, The Netherlands, Netherlands Communication dans un congrès inria-00616167v1
	Using Frankenstein's Creature Paradigm to Build a Patient Specific Atlas Olivier Commowick , Simon K. K. Warfield , Grégoire Malandain Medical Image Computing and Computer-Assisted Intervention (MICCAI'09), Part II, 2009, London, UK, United States. pp.993--1000, ⟨10.1007/978-3-642-04271-3_120⟩ Communication dans un congrès inria-00616133v1
	Using consensus measures for atlas construction Liliane Ramus , Grégoire Malandain Proceedings of the Sixth IEEE International Symposium on Biomedical Imaging 2009 (ISBI'09), 2009, Boston, MA, United States Communication dans un congrès inria-00616142v1
	Computational models of flow in cerebral aneurisms Marc Thiriet , Serge Piperno , Grégoire Malandain , Pascal Frey , Jacques Bittoun 11th Conference of the European Society of Biomechanics, Aug 2008, Toulouse, France. pp.273-282, ⟨10.1145/1400751.1400788⟩ Communication dans un congrès inria-00615800v1
	An Automatic Segmentation of T2-FLAIR Multiple Sclerosis Lesions Jean-Christophe Souplet , Christine Lebrun , Nicholas Ayache , Grégoire Malandain MICCAI-Multiple Sclerosis Lesion Segmentation Challenge Workshop, 2008, New York, NY, USA, United States Communication dans un congrès inria-00616119v1
	A New Evaluation Of The Brain Parenchymal Fraction: Application In Multiple Sclerosis Longitudinal Studies Jean-Christophe Souplet , Christine Lebrun , Nicholas Ayache , Grégoire Malandain Proceedings of the IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), 2008, Paris, France, France. pp.65-68 Communication dans un congrès inria-00616128v1
	Efficient Selection of the Most Similar Image in a Database for Critical Structures Segmentation Olivier Commowick , Grégoire Malandain Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI'07), Part II, 2007, Brisbane, Australia, Australia. pp.203--210 Communication dans un congrès inria-00616045v1
	An Efficient Locally Affine Framework for the Registration of Anatomical Structures Olivier Commowick , Vincent Arsigny , Jimena Costa , Nicholas Ayache , Grégoire Malandain Proceedings of the Third IEEE International Symposium on Biomedical Imaging (ISBI 2006), 2006, Crystal Gateway Marriott, Arlington, Virginia, USA, United States. pp.478-481 Communication dans un congrès inria-00615606v1
	Processing and Mosaicing of Fibered Confocal Images Nicholas Ayache , Tom Vercauteren , Grégoire Malandain , Fabien Oberrietter , Nicolas Savoire MICCAI Workshop on Microscopic Image Analysis with Applications in Biology (MIAAB'06), 2006, no address, Denmark Communication dans un congrès inria-00615589v1
	Evaluation of Atlas Construction Strategies in the Context of Radiotherapy Planning Olivier Commowick , Grégoire Malandain Proceedings of the SA2PM Workshop (From Statistical Atlases to Personalized Models), 2006, Copenhagen, Denmark Communication dans un congrès inria-00615605v1
	Respiratory Motion Correction in Emission Tomography Image Reconstruction Mauricio Antonio Reyes Aguirre , Grégoire Malandain , Pierre Malick Koulibaly , Miguel Ángel González Ballester , Jacques Darcourt Proceedings of MICCAI'05, Part II, 2005, Palm Springs, California, United States. pp.369--376, ⟨10.1007/11566489₄6⟩ Communication dans un congrès inria-00616009v1
	Respiratory Motion Correction in Emission Tomography Imaging Mauricio Antonio Reyes Aguirre , Grégoire Malandain , Jacques Darcourt , Pierre Malick Koulibaly Fully Three-Dimensional Image Reconstruction Meeting in Radiology and Nuclear Medicine, 2005, Salt Lake City, Utah, USA, United States Communication dans un congrès inria-00615995v1
	Retrospective cross-evaluation of an histological and deformable 3D atlas of the basal ganglia on series of Parkinsonian patients treated by deep brain stimulation (DBS) Eric Bardinet , Didier Dormont , Grégoire Malandain , Manik Bhattacharjee , Bernard Pidoux Proceedings of MICCAI'05, 2005, Palm Springs, California, United States. pp.385--393, ⟨10.1007/11566489₄8⟩ Communication dans un congrès inria-00616005v1
	Liver registration for the follow-up of hepatic tumors Arnaud Charnoz , Vincent Agnus , Grégoire Malandain , Clément Forest , Mohamed Tajine Proceedings of MICCAI'05, 2005, Palm Springs, California, United States. pp.155--162, ⟨10.1007/11566489₂0⟩ Communication dans un congrès inria-00616006v1
	Incorporating statistical measures of anatomical variability in atlas-to-subject registration for conformal brain radiotherapy. Olivier Commowick , Radu Stefanescu , Pierre Fillard , Vincent Arsigny , Nicholas Ayache Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005, Oct 2005, Palm Springs, CA, United States. pp.927-34, ⟨10.1007/11566489_114⟩ Communication dans un congrès inria-00502673v1
	Non-Linear 2D and 3D Registration Using Block-Matching and B-Splines Heike Hufnagel , Xavier Pennec , Grégoire Malandain , Hans Handels , Nicholas Ayache Bildverarbeitung fuer die Medizin 2005, Deutsches Krebsforschungszentrum, 2005, Heidelberg, Germany, Germany. pp.325-329, ⟨10.1007/3-540-26431-0_67⟩ Communication dans un congrès inria-00615991v1
	Tree Matching Applied to Vascular System Arnaud Charnoz , Vincent Agnus , Grégoire Malandain , Luc Soler , Mohamed Tajine Graph-Based Representations in Pattern Recognition, 2005, no address, France. pp.183--192, ⟨10.1007/b107037⟩ Communication dans un congrès inria-00615996v1
	Vascular system matching validated on the liver Arnaud Charnoz , Vincent Agnus , Grégoire Malandain , Luc Soler , Mohamed Tajine Information Processing in Medical Imaging 2005 (IPMI'05), 2005, Glenwood springs, Colorado, USA, United States. pp.443--455, ⟨10.1007/11505730_37⟩ Communication dans un congrès inria-00616002v1
	Measuring Blood Cells Velocity In Microvessels From a Single Image: Application To In Vivo and In Situ Confocal Microscopy Nicolas Savoire , Georges Le Goualher , Aymeric Perchant , François Lacombe , Grégoire Malandain Proc. ISBI'04, 2004, Arlington (USA), United States. pp.456--459 Communication dans un congrès inria-00615976v1
	Automatic Classification of SPECT Images of Alzheimer's Disease Patients and Control Subjects Jonathan Stoeckel , Nicholas Ayache , Grégoire Malandain , Pierre Malick Koulibaly , Klaus P. Ebmeier Proc. of MICCAI'04, 2004, Saint-Malo, France, France. pp.654--662 Communication dans un congrès inria-00615982v1
	Skeletonization by blocks for large datasets: application to brain microcirculation Céline Fouard , Grégoire Malandain , Stefen Prohaska , Malte Westerhoff , Francis Cassot International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04), IEEE, 2004, Arlington, VA, USA, United States Communication dans un congrès inria-00615970v1
	In Silico Tumor Growth: Application to Glioblastomas Olivier Clatz , Pierre Yves Bondiau , Hervé Delingette , Grégoire Malandain , Maxime Sermesant Proc. of the 7th Int. Conf on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2004 (2), 2004, Saint-Malo, France, France. pp.337--345 Communication dans un congrès inria-00615984v1
	Hierarchical Segmentation of Multiple Sclerosis Lesions in Multi-Sequence MRI Guillaume Dugas-Phocion , Miguel Ángel González Ballester , Christine Lebrun , Stéphane Chanalet , Caroline Bensa International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04), IEEE, 2004, Arlington, VA, USA, United States Communication dans un congrès inria-00615969v1
	Non-Rigid Atlas to Subject Registration with Pathologies for Conformal Brain Radiotherapy Radu Stefanescu , Olivier Commowick , Grégoire Malandain , Pierre-Yves Bondiau , Nicholas Ayache MICCAI 2004 - 7th International Conference on Medical Image Computing and Computer-Assisted Intervention, Sep 2004, Saint-Malo, France. pp.704-711, ⟨10.1007/978-3-540-30135-6_86⟩ Communication dans un congrès hal-03989487v1
	Squelettisation par blocs pour des grands volumes de données 3D: application à la microcirculation cérébrale Céline Fouard , Grégoire Malandain , Stefen Prohaska , Malte Westerhoff , Francis Cassot Proc. of RFIA'04, 2004, Toulouse, France, France Communication dans un congrès inria-00615983v1
	3D tomographic reconstruction of coronary arteries using a precomputed 4D motion field Christophe Blondel , Régis Vaillant , Grégoire Malandain , Nicholas Ayache Proceedings of the VIIth International Conference on Fully 3D Reconstruction In Radiology and Nuclear Medicine, 2003, Saint-Malo, France, France Communication dans un congrès inria-00615958v1
	4-D Tomographic Representation of Coronary Arteries from One Rotational X-Ray Sequence Christophe Blondel , Grégoire Malandain , Régis Vaillant , Frédéric Devernay , Ève Coste-Manière Medical Image Computing and Computer-Assisted Intervention, Nov 2003, Montreal, Canada. ⟨10.1007/978-3-540-39899-8_52⟩ Communication dans un congrès inria-00262367v1
	Intensity compensation within series of images Grégoire Malandain , Eric Bardinet Medical image computing and computer-assisted intervention (MICCAI 2003), 2003, Montreal, Canada, Canada. pp.41--49 Communication dans un congrès inria-00615950v1
	Piecewise Affine Registration of Biological Images Alain Pitiot , Grégoire Malandain , Eric Bardinet , Paul Thompson Second International Workshop on Biomedical Image Registration WBIR'03, 2003, Philadelphia, PA, USA, United States. pp.91--101 Communication dans un congrès inria-00615673v1
	4D deformation field of coronary arteries from monoplane rotational X-ray angiography Christophe Blondel , Grégoire Malandain , Régis Vaillant , Nicholas Ayache Computer Assisted Radiology and Surgery 2003 Proceedings, 2003, Londres, United Kingdom, United Kingdom. ⟨10.1016/S0531-5131(03)00256-5⟩ Communication dans un congrès inria-00615935v1
	2D to 3D Refinement of Post Mortem Optical and MRI Co-Registration C. Kenwright , Eric Bardinet , S.A. Hojjat , Grégoire Malandain , Nicholas Ayache Medical image computing and computer-assisted intervention (MICCAI 2003), 2003, Montreal, Canada, Canada. pp.935--944 Communication dans un congrès inria-00615949v1
	Delineation of the basal ganglia in MR images of patients by automatic registration of a multimodal atlas based on histological and MR data Jérôme Yelnik , Eric Bardinet , Didier Dormont , Chantal François , Dominique Tandé NeuroImage (HBM'03), 2003, New York, USA, United States Communication dans un congrès inria-00615954v1
	Fusion of autoradiographies with an MR volume using 2-D and 3-D linear transformations Grégoire Malandain , Eric Bardinet Proceedings of Information Processing in Medical Imaging (IPMI'03), 2003, no address, United Kingdom. pp.487--498 Communication dans un congrès inria-00615674v1
	Systematized calculation of optimal coefficients of 3-D chamfer norms Céline Fouard , Grégoire Malandain Discrete Geometry for Computer Imagery, 2003, Napoli, Italy. pp.214--223, ⟨10.1007/b94107⟩ Communication dans un congrès hal-00308962v1
	Automatic trinocular 3D reconstruction of coronary artery centerlines from rotational X-ray angiography Christophe Blondel , Régis Vaillant , Frédéric Devernay , Grégoire Malandain , Nicholas Ayache Computer Assisted Radiology Surgery, 2002, Paris, France Communication dans un congrès inria-00262383v1
	Improved Detection Sensitivity in Functional MRI Data using a Brain Parcelling Technique Guillaume Flandin , Ferath Kherif , Xavier Pennec , Grégoire Malandain , Nicholas Ayache Medical Image Computing and Computer-Assisted Intervention (MICCAI'02), 2002, Tokyo, Japan. pp.467--474, ⟨10.1007/3-540-45786-0_58⟩ Communication dans un congrès inria-00615921v1
	Co-registration of histological, optical and MR data of the human brain Eric Bardinet , Sébastien Ourselin , Didier Dormont , Grégoire Malandain , Dominique Tandé Medical Image Computing and Computer-Assisted Intervention (MICCAI'02), 2002, Tokyo, Japan. pp.548--555 Communication dans un congrès inria-00615920v1
	From medical images to computational meshes Jean-Daniel Boissonnat , Raphaelle Chaine , P. Frey , Grégoire Malandain , F. Nicoud Conference on Modelling and Simulation for Computer-aided Medicine and Surgery (MS4CMS'02), 2002, no address, France. pp.1--7 Communication dans un congrès inria-00615907v1
	Elaboration of a three-dimensional, functional and registrable atlas of the human basal ganglia Jérôme Yelnik , Eric Bardinet , Didier Dormont , Chantal François , Dominique Tandé 3rd Forum of European Neuroscience, The Federation of European Neuroscience Societies (FENS), 2002, Paris, France Communication dans un congrès inria-00615904v1
	Computing the Diameter of a Point Set Grégoire Malandain , Jean-Daniel Boissonnat Discrete Geometry for Computer Imagery (DGCI 2002), 2002, Bordeaux, France, France Communication dans un congrès inria-00615676v1
	Three dimensional functional cartography of the human basal ganglia by registration of optical and histological serial sections Eric Bardinet , Sébastien Ourselin , Grégoire Malandain , Dominique Tandé , Karine Parain IEEE International Symposium on Biomedical Imaging, 2002, Washington, USA, United States. pp.329--332 Communication dans un congrès inria-00615915v1
	Evaluation of an automatic classifier for SPECT Alzheimer's disease diagnosis Octave Migneco , Grégoire Malandain , Pierre Malick Koulibaly , Philippe Robert , Nicholas Ayache European Association of Nuclear Medicine Meeting, 2001, Napoli, Italy, Italy Communication dans un congrès inria-00615884v1
	Modélisation 3D+t de l'arbre coronaire à partir de séquences angiographiques Fabien Mourgues , Frédéric Devernay , Grégoire Malandain , Ève Coste-Manière Journées ORASIS - 2001, 2001, Obernai, France Communication dans un congrès hal-00821478v1
	Using SPM to Detect Evolving MS Lesions David Rey , Jonathan Stoeckel , Grégoire Malandain , Nicholas Ayache 4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01), 2001, Utrecht, The Netherlands, Netherlands. pp.1232--1234 Communication dans un congrès inria-00615874v1
	Retrospective Evaluation of Inter-subject Brain registration Pierre Hellier , Christian Barillot , Isabelle Corouge , B. Giraud , Georges Le Goualher 4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01), 2001, Utrecht, The Netherlands, Netherlands. pp.258--265 Communication dans un congrès inria-00615678v1
	Classification of SPECT Images of Normal Subjects versus Images of Alzheimer's Disease Patients Jonathan Stoeckel , Grégoire Malandain , Octave Migneco , Pierre Malick Koulibaly , Philippe Robert 4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01), 2001, Utrecht, The Netherlands, Netherlands. pp.666--674 Communication dans un congrès inria-00615876v1
	3D+t Modeling of Coronary Artery Tree from Standard Non Simultaneous Angiograms Fabien Mourgues , Frédéric Devernay , Grégoire Malandain , Ève Coste-Manière Medical Image Computing and Computer-Assisted Intervention - MICCAI 2001, Oct 2001, Utrecht, Netherlands. pp.1320-1322, ⟨10.1007/3-540-45468-3_213⟩ Communication dans un congrès inria-00267253v1
	Smoothness and degrees of freedom restrictions when using SPM 99 Jonathan Stoeckel , Jean-Baptiste Poline , Grégoire Malandain , Nicholas Ayache , Jacques Darcourt Human Brain Mapping HBM'01, 2001, Brighton, United Kingdom Communication dans un congrès inria-00615888v1
	A Spatio-temporal Model-based Statistical Approach to Detect Evolving Multiple Sclerosis Lesions David Rey , Jonathan Stoeckel , Grégoire Malandain , Nicholas Ayache IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, MMBIA'01, 2001, Kauia, Hawai, USA, United States Communication dans un congrès inria-00615890v1
	Fusion of histological sections and MR images: towards the construction of an atlas of the human basal ganglia Sébastien Ourselin , Eric Bardinet , Didier Dormont , Grégoire Malandain , Alexis Roche 4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01), 2001, Utrecht, The Netherlands, Netherlands. pp.743--751 Communication dans un congrès inria-00615872v1
	Generalized Correlation Ratio for Rigid Registration of 3D Ultrasound with MR Images Alexis Roche , Xavier Pennec , M. Rudolph , D.P. Auer , Grégoire Malandain Proc. of the 3rd Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'00), 2000, Pittsburgh, Pennsylvanie, USA, United States. pp.567--577, ⟨10.1007/978-3-540-40899-4_58⟩ Communication dans un congrès inria-00615680v1
	Object Representation and Comparison Inferred from Its Medial Axis Eric Bardinet , Grégoire Malandain , S. Damas , N. Perez de La Blanca Capilla International Conference on Pattern Recognition (ICPR 2000), 2000, Barcelone, Espagne, Spain. pp.1712--1715 Communication dans un congrès inria-00615849v1
	A new 3D segmentation of liver neoplasm, portal venous system and parenchymal contours Luc Soler , Olivier Dourthe , Grégoire Malandain , Johan Montagnat , Hervé Delingette European Congress of Radiology, 2000, Vienne (Autriche), Austria Communication dans un congrès inria-00615847v1
	An Automatic Virtual Patient Reconstruction from CT-Scans for Hepatic Surgical Planning Luc Soler , Jean-Marie Clément , Christophe Koehl , Hervé Delingette , Grégoire Malandain Medicine Meets Virtual Reality (MMVR'2000), 2000, Los Angeles, United States Communication dans un congrès inria-00615853v1
	Planification Chirurgicale Hépatique Assistée par Ordinateur Luc Soler , Christophe Koehl , Hervé Delingette , Grégoire Malandain , Nicholas Ayache 11ème Journées de printemps de l'ACHBT, 2000, Paris (France), France Communication dans un congrès inria-00615839v1
	Structural Object Matching Eric Bardinet , Sara Fernández-Vidal , S. Damas , Grégoire Malandain , N. Perez de La Blanca Capilla Advanced Concepts for Intelligent Vision Systems (ACIVS 2000), 2000, Baden-Baden, Allemagne, Germany Communication dans un congrès inria-00615842v1
	SPM Analysis Applied to MIBI-SPECT for the Diagnosis of Recurrent Oligodendrogliomas I. Dygai , Jonathan Stoeckel , Octave Migneco , P. Desvignes , Grégoire Malandain European Association of Nuclear Medicine Meeting, 2000, Paris, France, France Communication dans un congrès inria-00615844v1
	Absolute calibration of HMPAO SPECT using Xenon-133 Octave Migneco , Grégoire Malandain , Alexis Roche , I. Dygai , F. Bussière European Association of Nuclear Medicine Meeting, 2000, Paris, France, France Communication dans un congrès inria-00615845v1
	A Fully Automatic Anatomical, Pathological and Fonctionnal Segmentation from CT-scans for Hepatic Surgery Luc Soler , Hervé Delingette , Grégoire Malandain , Johan Montagnat , Nicholas Ayache Medical Imaging 2000, SPIE, 2000, San Diego, United States. pp.246--255 Communication dans un congrès inria-00615852v1
	Fusion Scanner / IRM entièrement automatique : perspective d'utilisation pour la radiothérapie Pierre-Yves Bondiau , Grégoire Malandain , Karen Bénézery , Alexis Roche , R. Ferrand Proc. du XIX Forum de Cancérologie, 1999, Paris, France Communication dans un congrès inria-00615830v1
	Cylindrical Echocardiographic Image Segmentation Based on 3D Deformable Models Johan Montagnat , Hervé Delingette , Grégoire Malandain Medical Image Computing and Computer-Assisted Intervention - MICCAI'99, Sep 1999, Cambridge, United Kingdom. pp.168-175, ⟨10.1007/10704282_18⟩ Communication dans un congrès hal-00691700v1
	Planification Chirurgicale Hépatique Assistée par Ordinateur Luc Soler , Jean-Marie Clément , Christophe Koehl , Hervé Delingette , Grégoire Malandain Journées de la société française de Chirurgie Digestive, 1999, Paris, France Communication dans un congrès inria-00615826v1
	Towards a Better Comprehension of Similarity Measures used in Medical Image Registration Alexis Roche , Grégoire Malandain , Nicholas Ayache , Sylvain Prima Proc. of 2nd Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'99), 1999, Cambridge, UK, United Kingdom. pp.555-566 Communication dans un congrès inria-00615832v1
	Model-Based Multiscale Detection of 3D Vessels Karl Krissian , Grégoire Malandain , Nicholas Ayache , Régis Vaillant , Yves Trousset Proc. of Worshop on Biomedical Image Analysis WBIA'98, 1998, Santa Barbara, United States. pp.202-208 Communication dans un congrès inria-00615688v1
	Model-Based Multiscale Detection of 3D Vessels Karl Krissian , Grégoire Malandain , Nicholas Ayache , Régis Vaillant , Yves Trousset Proc. of the IEEE Conf. on Computer Vision and Pattern Recognition, CVPR'98, 1998, Santa Barbara, United States. pp.722-727 Communication dans un congrès inria-00615687v1
	Modélisation numérique de l'écoulement dans les anévrismes cérébraux Marc Thiriet , Grégoire Malandain XXIIIème congrès de la société de Biomécanique, 1998, Lyon, France, France Communication dans un congrès inria-00615816v1
	The Correlation Ratio as a New Similarity Measure for Multimodal Image Registration Alexis Roche , Grégoire Malandain , Xavier Pennec , Nicholas Ayache Medical Image Computing and Computer-Assisted Interventation, 1998, France. pp.1115-1124, ⟨10.1007/BFb0056181⟩ Communication dans un congrès cea-00333675v1
	L'oeil virtuel Pierre-Yves Bondiau , Grégoire Malandain , Nicholas Ayache , C. Zur , Pierre Chauvel 103ème Congrès de la société française d'ophtalmologie, 1997, Paris, France, France Communication dans un congrès inria-00615775v1
	Directional Anisotropic Diffusion Applied to Segmentation of Vessels in 3D Images Karl Krissian , Grégoire Malandain , Nicholas Ayache Scale-Space Theory in Computer Vision (Scale-Space'97), 1997, Utrecht, The Netherlands, Netherlands. pp.345--348 Communication dans un congrès inria-00615689v1
	Fast Binary Image Processing Using Binary Decision Diagrams Luc Robert , Grégoire Malandain Computer Vision and Pattern Recognition, IEEE, 1997, Puerto Rico, Puerto Rico. pp.97--102 Communication dans un congrès inria-00615692v1
	Matching 3D MR Angiography Data and 2D X-ray Angiograms Jacques Feldmar , Grégoire Malandain , Nicholas Ayache , Sara Fernández-Vidal , Eric Maurincomme First Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine and Medical Robotics and Computer-Assisted Surgery - CVRMed-MRCAS'97, Mar 1997, Grenoble, France. pp.129--138, ⟨10.1007/BFb0029232⟩ Communication dans un congrès inria-00615779v1
	Eye Reconstruction and CT-Retinography Fusion for Proton Treatment Planning of Ocular Diseases Pierre-Yves Bondiau , Grégoire Malandain CVRMed-MRCAS'97, 1997, Grenoble, France, France. pp.705--714 Communication dans un congrès inria-00615778v1
	Automatic eye reconstruction for radiotherapy Pierre-Yves Bondiau , Grégoire Malandain , Pierre Chauvel , Frédérique Peyrade , J.N. Bruneton 1st Joint Annual Conference of the International Society for Computer Aided Surgery, 1997, Berlin, Germany, Germany Communication dans un congrès inria-00615776v1
	Activation mnésique en TEMP Octave Migneco , Jacques Darcourt , M. Benoit , Grégoire Malandain , Jean-Philippe Thirion 36eme Colloque de médecine nucléaire 1997, 1997, Rennes, France, France Communication dans un congrès inria-00615777v1
	Segmentation automatique : application aux angioscanners 3D du foie Luc Soler , Grégoire Malandain , Hervé Delingette Proceedings of Sixth Orasis conference (ORASIS'97), 1997, La Colle-sur-Loup, France, France Communication dans un congrès inria-00615690v1
	SPECT memory activation studies thanks to non-rigid automated 3D image registration Octave Migneco , Jean-Philippe Thirion , M. Benoit , Grégoire Malandain , Philippe Robert CVRMed-MRCAS'97, 1997, Grenoble, France, France. pp.487--490 Communication dans un congrès inria-00615780v1
	SPECT memory activation thanks to non-rigid coregistration Octave Migneco , M. Benoit , Grégoire Malandain , Jean-Philippe Thirion , Philippe Robert European Association of Nuclear Medecine Meeting, 1997, Glasgow, Scotland, United Kingdom Communication dans un congrès inria-00615784v1
	Automatic Segmentation of Portal Vein in CT-Scans of the Liver Luc Soler , Grégoire Malandain , Johan Montagnat , Hervé Delingette , Nicholas Ayache Proceedings of World Congress on Medical Physics and Biomedical Engineering, 1997, Nice, France, France. pp.788 Communication dans un congrès inria-00615793v1
	Comparison and evaluation of retrospective intermodality image registration techniques Jay B. West , Michael J. Fitzpatrick , Matthew Y. Wang , Benoit M. Dawant , Calvin R. Maurer Medical Imaging 1996: Image Processing, Apr 1996, Newport Beach, California, USA, United States. ⟨10.1117/12.237936⟩ Communication dans un congrès inria-00615767v1
	Extension of the ICP Algorithm to Non-Rigid Intensity-Based Registration of 3D Volumes Jacques Feldmar , Grégoire Malandain , Jérôme Declerck , Nicholas Ayache Mathematical Methods in Biomedical Image Analysis, 1996, San Francisco, California, USA, United States Communication dans un congrès inria-00615765v1
	Projet de reconstruction tridimensionnelle de l'oeil à partir des images scanneurs, IRM et de fundographie. Utilisation pour la protonthérapie des tumeurs oculaires Pierre-Yves Bondiau , Grégoire Malandain , Pierre Chauvel 35eme Congrès de la société française des physiciens d'hôpital, 1996, Toulouse, France, France Communication dans un congrès inria-00615755v1
	Une étude TEMP d'activation mnésique réalisée grâce à des recalages d'images 3D Octave Migneco , Jean-Philippe Thirion , M. Benoit , Grégoire Malandain , Philippe Robert Actes du congrès sur la Méthodologie en imagerie fonctionnelle cérébrale, 1996, Lyon, France, France Communication dans un congrès inria-00615758v1
	Clinical and Technical Requirements for Proton Treatment Planning of Ocular Diseases Pierre Chauvel , W. Sauerwein , N. Bornfeld , W. Friedrichs , N. Brassart First International Symposium on Special Aspects of Radiotherapy, 1996, Berlin (Germany), Germany Communication dans un congrès inria-00615761v1
	Squelettes euclidiens d'objets n-dimensionnels Sara Fernández-Vidal , Grégoire Malandain 10ème Congrès Reconnaissance des Formes et Intelligence Artificielle (RFIA'96), AFCET - AFIA, 1996, Rennes, France, France Communication dans un congrès inria-00615940v1
	Recalage sans cadre stéréotaxique d'images volumiques et projectives en radiologie interventionnelle Nicholas Ayache , Jacques Feldmar , Grégoire Malandain , Eric Maurincomme , C. Picard Mini colloque INSERM de radiologie interventionnelle, 1995, Paris, France Communication dans un congrès inria-00615747v1
	Topologically correct skeleton in n-D Grégoire Malandain , Sara Fernández-Vidal 5th Discrete Geometry for Computer Imagery (DGCI'95), 1995, Clermont-Ferrand, France, France. pp.199--208 Communication dans un congrès inria-00615739v1
	Automatic registration of Myocardial Perfusion study using a Potential Based Rigid Transformation M.L. Goris , Grégoire Malandain , I. Marque 2nd International Conference of Nuclear Cardiology, 1995, Cannes France, France Communication dans un congrès inria-00615738v1
	Digital Euclidean skeleton in n-D Sara Fernández-Vidal , Grégoire Malandain 9th Scandinavian Conference on Image Analysis (SCIA'95), IAPR, 1995, Uppsala, Sweden, Sweden. pp.517--524 Communication dans un congrès inria-00615740v1
	Improving Registration of 3-D Medical Images Using a Mechanical Based Method Grégoire Malandain , Sara Fernández-Vidal , Jean-Marie Rocchisani 3rd European Conference on Computer Vision (ECCV'94), 1994, Stockholm, Sweden, Sweden. pp.131--136 Communication dans un congrès inria-00615727v1
	Rigid Registration of 3-D Objects by Motion Analysis Grégoire Malandain , Sara Fernández-Vidal , Jean-Marie Rocchisani 12th International Conference on Pattern Recognition (ICPR'94), IAPR, 1994, Jérusalem, Israël, Israel. pp.579--581 Communication dans un congrès inria-00615725v1
	Fast characterization of 3D simple points Grégoire Malandain , Gilles Bertrand IAPR 11th International Conference on Pattern Recognition, 1992, The Hague, The Netherlands, Netherlands Communication dans un congrès inria-00615565v1
	Registration of 3D medical images using a mechanical based method Grégoire Malandain , Jean-Marie Rocchisani IEEE EMBS satellite symposium on 3D advanced image processing in medicine, 1992, Rennes, France, France Communication dans un congrès inria-00615570v1
	A new topological segmentation of discrete surfaces Gilles Bertrand , Grégoire Malandain 2nd European Conference on Computer Vision (ECCV 92), 1992, no address, Italy. pp.710--71 Communication dans un congrès inria-00615560v1
	3D superimposition of CT and SPECT images of the brain by a mechanical based method Grégoire Malandain , Jean-Marie Rocchisani European Association of Nuclear Medicine Congress, 1992, Lisbon, Portugal, Portugal Communication dans un congrès inria-00615564v1
	Topological classification in digital space Grégoire Malandain , Gilles Bertrand , Nicholas Ayache XIIth international conference on Information Processing in Medical Imaging (IPMI), 1991, Wye, Kent, England, United Kingdom. pp.300--313 Communication dans un congrès inria-00615558v1
	Topological segmentation of discrete surfaces Grégoire Malandain , Gilles Bertrand , Nicholas Ayache Proceedings of the conference on Computer Vision and Pattern Recognition, IEEE, 1991, Lahaina, Maui, Hawaii, United States. pp.444--449 Communication dans un congrès inria-00615557v1
	Recursive filtering and edge closing: two primary tools for 3-D edge detection Olivier Monga , Rachid Deriche , Grégoire Malandain , Jean-Pierre Cocquerez 1st European Conference on Computer Vision (ECCV'90), 1990, Nice, France, France Communication dans un congrès inria-00615549v1
	3-D edge detection by recursive filtering and edge tracking Olivier Monga , Rachid Deriche , Grégoire Malandain , Jean-Pierre Cocquerez 10th International Conference on Pattern Recognition, 1990, Atlantic City, USA, United States Communication dans un congrès inria-00615550v1

	Asclepios: a Research Project-Team at INRIA for the Analysis and Simulation of Biomedical Images Nicholas Ayache , Olivier Clatz , Hervé Delingette , Grégoire Malandain , Xavier Pennec Bertot, Y. and Huet, G. and Lévy, J.-J. and Plotkin, G. From semantics to computer science: essays in honor of Gilles Kahn, Cambridge University Press, pp.415-436, 2009, ⟨10.1017/CBO9780511770524.019⟩ Chapitre d'ouvrage inria-00616094v1
	Processing of In Vivo Fibered Confocal Microscopy Video Sequences Tom Vercauteren , Nicholas Ayache , Nicolas Savoire , Grégoire Malandain , Aymeric Perchant Rittscher, Jens and Machiraju, Raghu and Wong, Stephen T.C. Microscopic Image Analysis for Life Science Applications, Artech House, pp.441--463, 2008 Chapitre d'ouvrage inria-00616083v1
	Applications de la géométrie discrète en imagerie médicale Grégoire Malandain Coeurjolly, David and Montanvert, Annick and Chassery, Jean-Marc. Géométrie discrète et images numériques, Hermès, pp.371--379, 2007, Traités IC2 Chapitre d'ouvrage inria-00616032v1

	Robust Mosaicing Method with Correction of Motion Distorsions and Tissue Deformations for In Vivo Fibered Microscopy Tom Vercauteren , Aymeric Perchant , Nicholas Ayache , Xavier Pennec , Grégoire Malandain United States, Patent n° : US Patent US20090041314. 2007 Brevet hal-00875647v1
	Electronic device for automatic registration of images Alexis Roche , Grégoire Malandain , Nicholas Ayache , Xavier Pennec United States, Patent n° : US patent No US 6,539,127 B1, Mars 25, 2003. 2003 Brevet hal-00875677v1
	Dispositif électronique de recalage automatique d'images Alexis Roche , Grégoire Malandain , Nicholas Ayache , Xavier Pennec France, Patent n° : Brevet numéro No FR 98 09649. European extension EP0977148. 1999 Brevet hal-00875674v1

	Contact-dependent cell communications drive morphological invariance during ascidian embryogenesis Léo Guignard , Ulla-Maj Fiuza , Bruno Leggio , Emmanuel Faure , Julien Laussu 2017, ⟨10.1101/238741⟩ Autre publication scientifique hal-01938126v2
	Construction of a dental atlas for automatic teeth segmentation to improve post-irradiation dental care management Juliette Thariat , Liliane Ramus , Philippe Maingon , Vincent Grégoire , Serge Marcie 2010 Autre publication scientifique hal-00813782v1
	Atlas de contourage automatique des dents pour l'optimisation des soins dentaires Juliette Thariat , Liliane Ramus , Philippe Maingon , Vincent Grégoire , Vincent Darcourt 2010 Autre publication scientifique hal-00813781v1
	Longitudinal MRI assessment of quality of life and disability in early treated relapsing remitting multiple sclerosis Mikael Cohen , Christine Lebrun , Dominique Aufauvre , Stéphane Chanalet , Christelle Filleau 2010 Autre publication scientifique hal-00813768v1
	Neurobase: gestion de données et de connaissances distribuées en neuroimagerie Christian Barillot , Laurent Amsaleg , Florent Aubry , Jean Pierre Bazin , Yann Cointepas 2005 Autre publication scientifique inserm-00139814v1

	From extraction of physiological features with dynamic µ-SPECT imaging to modelling of iodide biodistribution in stomach Marine Breuilly , Kaouthar Chatti , Jacques Darcourt , Philippe Franken , Julien Guglielmi [Research Report] Inria Sophia Antipolis. 2015 Rapport hal-01186222v2
	On optimal chamfer masks and coefficients Grégoire Malandain , Céline Fouard [Research Report] RR-5566, INRIA. 2005, pp.36 Rapport inria-00070440v1
	Blockwise processing applied to brain micro-vascular network study Céline Fouard , Grégoire Malandain , Steffen Prohaska , Malte Westerhoff [Research Report] RR-5581, INRIA. 2005, pp.27 Rapport inria-00070426v1
	Reconstruction of Coronary Arteries from One Rotational X-Ray Projection Sequence Christophe Blondel , Grégoire Malandain , Régis Vaillant , Nicholas Ayache [Research Report] RR-5214, INRIA. 2004, pp.43 Rapport inria-00077050v1
	Respiratory Movement Correction in Emission Tomography Mauricio Reyes Aguirre , Grégoire Malandain , Jacques Darcourt RR-5279, INRIA. 2004, pp.47 Rapport inria-00070721v1
	Brain Tumor Growth Simulation Olivier Clatz , Pierre-Yves Bondiau , Hervé Delingette , Maxime Sermesant , Simon K. Warfield [Research Report] RR-5187, INRIA. 2004 Rapport inria-00071401v1
	Fusion of autoradiographies with an MR volume using 2-D and 3-D linear transformations Éric Bardinet , Grégoire Malandain RR-4791, INRIA. 2003 Rapport inria-00071795v1
	Automated Piecewise Affine Registration of Biological Images Alain Pitiot , Éric Bardinet , Paul M. Thompson , Grégoire Malandain RR-4866, INRIA. 2003 Rapport inria-00071717v1
	Automatic calculation of chamfer mask coefficients for large masks and anisotropic images Céline Fouard , Grégoire Malandain RR-4792, INRIA. 2003 Rapport inria-00071794v1
	Superresolution in MRI and its influence in statistical analysis Pierre Kornprobst , Grégoire Malandain , Olivier Faugeras , R. Peeters , Thierry Viéville [Research Report] RR-4513, INRIA. 2002 Rapport inria-00072075v1
	Computing the Diameter of a Point Set Grégoire Malandain , Jean-Daniel Boissonnat RR-4233, INRIA. 2001 Rapport inria-00072354v1
	Robust Registration of Multi-Modal Medical Images: Towards Real-Time Clinical Applications Sébastien Ourselin , Xavier Pennec , Radu Stefanescu , Grégoire Malandain , Nicholas Ayache RR-4333, INRIA. 2001 Rapport inria-00072254v1
	Generalized Correlation Ratio for Rigid Registration of 3D Ultrasound with MR Images Alexis Roche , Xavier Pennec , Grégoire Malandain , Nicholas Ayache , Sébastien Ourselin [Research Report] RR-3980, INRIA. 2000, pp.24 Rapport inria-00072667v1
	Model Based Detection of Tubular Structures in 3D Images Karl Krissian , Grégoire Malandain , Nicholas Ayache , Régis Vaillant , Yves Trousset RR-3736, INRIA. 1999 Rapport inria-00072929v1
	Analyse statistique d'images médicales : étude et utilisation du logiciel SPM Marie-Laure Tabary , Nicholas Ayache , Jacques Darcourt , Grégoire Malandain RR-3802, INRIA. 1999 Rapport inria-00072857v1
	Unifying Maximum Likelihood Approaches in Medical Image Registration Alexis Roche , Grégoire Malandain , Nicholas Ayache RR-3741, INRIA. 1999 Rapport inria-00072923v1
	Segmentation automatique : application aux angioscanners 3D du foie Luc Soler , Grégoire Malandain , Hervé Delingette RR-3496, INRIA. 1998 Rapport inria-00073190v1
	Multimodal Image Registration by Maximization of the Correlation Ratio Alexis Roche , Grégoire Malandain , Nicholas Ayache , Xavier Pennec RR-3378, INRIA. 1998 Rapport inria-00073311v1
	Model Based Multiscale Detection and Reconstruction of 3D Vessels Karl Krissian , Grégoire Malandain , Nicholas Ayache RR-3442, INRIA. 1998 Rapport inria-00073248v1
	Directional Anisotropic Diffusion Applied to Segmentation of Vessels in 3D Images Karl Krissian , Grégoire Malandain , Nicholas Ayache RR-3064, INRIA. 1996 Rapport inria-00073628v1
	Squelettes euclidiens d'objets discrets n-dimensionnels Sara Fernández-Vidal , Grégoire Malandain RR-2771, INRIA. 1996 Rapport inria-00073921v1
	Fast Binary Image Processing Using Binary Decision Diagrams Luc Robert , Grégoire Malandain RR-3001, INRIA. 1996 Rapport inria-00073695v1
	Physically Based Rigid Registration of 3-D Free-Form Objects : application to Medical Imaging Grégoire Malandain , Sara Fernandez-Vidal , Jean-Marie Rocchisani [Research Report] RR-2453, INRIA. 1994 Rapport inria-00074222v1
	On topology in multidimensional discrete Grégoire Malandain RR-2098, INRIA. 1993 Rapport inria-00074574v1
	Matching of 3D medical images with a potential based method Grégoire Malandain , Jean-Marie Rocchisani [Research Report] RR-1890, INRIA. 1993 Rapport inria-00074781v1
	Segmentation topologique des surfaces discretes Grégoire Malandain , Gilles Bertrand , Nicholas Ayache [Rapport de recherche] RR-1357, INRIA. 1990 Rapport inria-00075202v1
	Recursive filtering and edge closing : two primary tools for 3d edge detection Olivier Monga , Rachid Deriche , Grégoire Malandain , J.P. Cocquerez RR-1103, INRIA. 1989 Rapport inria-00075456v1

	Definition of motionless phases for monitoring gated reconstruction of SPECT images in alive mice Marine Breuilly , Grégoire Malandain , Nicholas Ayache , Jacques Darcourt , Thierry Pourcher ICVSS - International Computer Vision Summer School, Jul 2010, Punta Sampieri, 97010 Scicli, Sicile, Italy. 2010 Document associé à des manifestations scientifiques hal-00759962v1

Gregoire Malandain

Publications

Embryo-scale epithelial buckling forms a propagating furrow that initiates gastrulation

A multiscale analysis of early flower development in Arabidopsis provides an integrated view of molecular regulation and growth control

Contact area-dependent cell communication and the morphological invariance of ascidian embryogenesis

In Toto Imaging and Reconstruction of Post-Implantation Mouse Development at the Single-Cell Level

A stochastic framework to model axon interactions within growing neuronal populations

A stochastic framework to model axon interactions within growing neuronal populations

Planar cell polarity genes frizzled4 and frizzled6 exert patterning influence on arterial vessel morphogenesis

Temporal epilepsy lesions may be detected by the voxel-based quantitative analysis of brain FDG-PET images using an original block-matching normalization software

Age-related changes in FDG brain uptake are more accurately assessed when applying an adaptive template to the SPM method of voxel-based quantitative analysis

A tree-topology preserving pairing for 3D/2D registration

Assessing the ability of the 2D Fisher-KPP equation to model cell-sheet wound closure

Amplitude-based data selection for optimal retrospective reconstruction in micro-SPECT

Voxel-based quantitative analysis of brain images from F-18 Fluorodeoxyglucose Positron Emission Tomography with a Block-Matching algorithm for spatial normalization

Radiotherapy and radiology: joint efforts for modern radiation planning and practice

DENTALMAPS: Automatic Dental Delineation for Radiotherapy Planning in Head and Neck Cancer

Vers un patient numérique personnalisé pour le diagnostic et la thérapie guidés par l'image [Towards a personalized digital patient for diagnosis and therapy guided by image].

Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge.

Les mathématiques cachées de la médecine

[Longitudinal study of health related quality of life in multiple sclerosis: correlation with MRI parameters]

Outils de contourage, utilisation et construction d'atlas anatomiques : exemples des cancers de la tete et du cou

Imaging plant growth in 4D : robust tissue reconstruction and lineaging at cell resolution.

A pre-clinical assessment of an atlas-based automatic segmentation tool for the head and neck

Revue des approches de segmentation des lésions de sclérose en plaques dans les séquences conventionnelles IRM

A three-dimensional histological atlas of the human basal ganglia. II. Atlas deformation strategy and evaluation in deep brain stimulation for Parkinson disease.

An efficient locally affine framework for the smooth registration of anatomical structures

Atlas-Based Delineation of Lymph Node Levels in Head and Neck Computed Tomography Images

Evaluation of an atlas-based automatic segmentation software for the delineation of brain organs at risk in a radiation therapy clinical context

A phantom study of the accuracy of CT, MR and PET image registrations with a block matching-based algorithm

A three-dimensional, histological and deformable atlas of the human basal ganglia. I. Atlas construction based on immunohistochemical and MRI data

Model-based respiratory motion compensation for emission tomography image reconstruction

Robust Mosaicing with Correction of Motion Distortions and Tissue Deformation for In Vivo Fibered Microscopy

Blockwise processing applied to brain microvascular network study

Early detection of cognitive impairment in relapsing-remitting multiple sclerosis: functional-anatomical correlations and longitudinal follow-up

A low temperature embedding and section registration strategy for 3D image reconstruction of the rat brain from autoradiographic sections.

Reconstruction of Coronary Arteries from a Single Rotational X-Ray Projection Sequence

Piecewise Affine Registration of Biological Images for Volume Reconstruction

Realistic Simulation of the 3D Growth of Brain Tumors in MR Images Coupling Diffusion with Mass Effect

La tomographie en mouvement

From arteriographies to computational flow in saccular aneurisms: the INRIA experience

Atlas-based automatic segmentation of MR images: validation study on the brainstem in radiotherapy context

3-D tomographic reconstruction of coronary arteries using a precomputed 4-D motion field

The use of superresolution techniques to reduce slice thickness in functional MRI

3-D chamfer distances and norms in anisotropic grids

The contribution of automatic anatomical matching of sequential brain MRI scans in the monitoring of multiple sclerosis lesions

Fusion of autoradiographs with an MR volume using 2-D and 3-D linear transformations

Traitement des images et radiothérapie

Anisotropic Filtering for Model Based Segmentation of 4D Cylindrical Echocardiographic Images

Retrospective evaluation of intersubject brain registration

Automatic three-dimensional model for protontherapy of the eye: Preliminary results

Computing the Diameter of a Point Set

Fully automatic anatomical, pathological, and functional segmentation from CT scans for hepatic surgery

Perfusion brain SPECT and Statistical Parametric Mapping analysis indicate that apathy is a cingulate syndrome: a study in Alzheimer's disease and non-demented patients

Rigid registration of 3-D ultrasound with MR images: a new approach combining intensity and gradient information.

Model-Based Detection of Tubular Structures in 3D Images

An automatic virtual patient reconstruction from CT-scans for hepatic surgical planning

Unifying maximum likelihood approaches in medical image registration

Euclidean Skeletons

Segmentation automatique : application aux angioscanners 3D du foie

Fast Binary Image Processing Using Binary Decision Diagrams

Extension of the ICP Algorithm to Nonrigid Intensity-Based Registration of 3D Volumes

X-ray angiography in stereotactic conditions: techniques and interest for interventional neuroradiology

Clinical and technical requirements for proton treatment planning of ocular diseases. The SERAG (South Europe Radiotherapy Group)

Comparison and evaluation of retrospective intermodality brain image registration techniques

A note on ''Building skeleton models via 3D medial surface-axis thinning algorithms''

A note on "Building skeleton models via 3-D medial surface/axis thinning algorithms"

Mise en correspondance d'objets 3D par une approche mécanique : application aux images médicales multimodales

A new characterization of three-dimensional simple points

Topological segmentation of discrete surfaces

Topological segmentation of discrete surfaces

Recursive filtering and edge tracking: two primary tools for 3-D edge detection

Automatic multidimensional segmentation of nuclear medicine images using fast recursive filters

Robust Plant Cell Tracking in Fluorescence Microscopy 3D+T Series

3D Coronary Vessel Tree Tracking in X-Ray Projections

Intensity-based matching and registration for 3D correlative microscopy with large discrepancies

Coherent temporal extrapolation of labeled images

Suivi temporel 3D de vaisseaux coronaires dans les projections rayons X

3D Coronary vessel tracking in x-ray projections

Modeling collective axon growth from in vivo data reveals the importance of physical axon-axon interactions