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Suggesting disease associations for overlooked metabolites using literature from metabolic neighbors

Maxime Delmas , Olivier Filangi , Christophe Duperier , Nils Paulhe , Florence Vinson , et al.
GigaScience, 2022, 12, pp.giad065. ⟨10.1093/gigascience/giad065⟩
Article dans une revue hal-04223426v1
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Untargeted metabolomic approach by GC-QTOF : From low to high resolution

Carole Migné , Nils Paulhe , Yann Guitton , Franck Giacomoni , Mélanie Pétéra , et al.
SMMAP 2017 (Spectrométrie de Masse, Métabolomique et Analyse Protéomique), Oct 2017, Marne-La-Vallée, France. , pp.476, 2017, SMMAP 2017-Livre des résumés
Poster de conférence hal-01674479v1

The FoodBAll online resources to support discovery of novel dietary biomarkers with metabolomics

Jarlei Fiamoncini , C. Weinert , L.O Dragsted , Franck Giacomoni , C Knox , et al.
Phenotypes and Prevention, NuGOweek 2016, Sep 2015, Copenhagen, Denmark. 111 p
Communication dans un congrès hal-02743308v1
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FoodComEx: une chimiothèque internationale pour les composés dérivés de l’alimentation

D. Wishart , C. Weinert , Estelle Pujos-Guillot , M. Ulaszewska , Franck Giacomoni , et al.
8. Journée Scientifique du CRNH Auvergne, Nov 2015, Clermont-Ferrand, France. 2015, 8ème Journée Scientifique du CRNH Auvergne
Poster de conférence hal-02742076v1
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Sequence analyses of Megabase-sized contigs of the wheat genome

Frédéric Choulet , Philippe Leroy , Franck Giacomoni , Jerome J. Salse , Etienne Paux , et al.
2. Workshop on TritiGEN. COST Action FA604, Apr 2008, Albena, Bulgaria
Communication dans un congrès hal-02818229v1
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Create, run, share, publish, and reference your LC-MS, FIA-MS, GC-MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics

Yann Guitton , Marie Tremblay-Franco , Gildas A Le Corguillé , Jean-Francois Martin , Mélanie Pétéra , et al.
International Journal of Biochemistry and Cell Biology, 2017, 93, pp.89-101. ⟨10.1016/j.biocel.2017.07.002⟩
Article dans une revue hal-01574351v1
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Towards a cyber Galaxy ?

Christophe C. Caron , Wilfried Carre , Alexandre Cormier , Sandra S. Derozier , Franck Giacomoni , et al.
JOBIM 2013, Jul 2013, Toulouse, France. pp.246, 2013, JOBIM TOULOUSE 2013 - RÉSUMÉS COURTS (affiches)
Poster de conférence hal-02748994v1

Metabolomics as a new key actor in systems biology for better understanding nutrition-health relationship

Estelle Pujos-Guillot , Mélanie Pétéra , Marion Brandolini-Bunlon , Yunfei Liu , Franck Giacomoni , et al.
1. Conference of the European Association of Systems Medicine (EASyM), Oct 2016, Berlin, Germany. 223 p., 2016, First Conference of the European Association of Systems Medicine-conference programme
Poster de conférence hal-01595134v1
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A project-scale map of metadata to improve future data management

Mélanie Pétéra , Cecile Cabasson , Blandine Comte , Christophe Duperier , Olivier Filangi , et al.
Analytics 2022, Sep 2022, Nantes, France.
Poster de conférence hal-03776494v1
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Interagir avec ses données de spectrométrie de masse sous Galaxy

Julien Saint-Vanne , Lain Pavot , Ronan Cariou , Sébastien Hutinet , Farid Ichou , et al.
15émes journées scientifiques du RFMF, May 2023, Perpignan, France. 2023
Poster de conférence hal-04321401v1

Suggesting disease associations for overlooked metabolites using literature from metabolic neighbours

M. Delmas , O. Filangi , C. Duperier , N. Paulhe , F. Vinson , et al.
2023
Pré-publication, Document de travail hal-04188519v1
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PeakForest: a spectral database and its toolbox, dedicated to the Metabolomics’ community

Nils Paulhe , Christophe Duperier , Marie Lefebvre , Pierrick Roger-Mele , Christophe Junot , et al.
12. annual conference of the Metabolomics Society, Jun 2016, Dublin, United Kingdom. 2016
Poster de conférence hal-02744357v1
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MS2Snoop: an R package for automatic extraction and curation of MS/MS spectra in metabolomics

Kevin Wagner , Lain Pavot , Franck Giacomoni , Guillaume Marti , Yann Guitton , et al.
Analytics 2022, Sep 2022, Nantes, France. 2022
Poster de conférence hal-04001175v1
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Chimiométrie et Métabolomique

Jean-Michel Roger , Rémi Servien , Jean-Claude Boulet , Marie Tremblay-Franco , Benoit Jaillais , et al.
Annales des falsifications, de l'expertise chimique et toxicologique, 2021, Eco-chimie pour des produits durables. Filières durables, procédés éco-respectueux, impact santé environnement, pp.80-84
Article dans une revue hal-03642211v1

Metabolomics resources in interoperability and Open-Science

Pablo Rodriguez-Mier , Dorrain Low Yanwen , Claudine Manach , Estelle Pujos-Guillot , Franck Giacomoni
MetaboMeeting, Dec 2017, Birmingham, United Kingdom. 116 p., 2017, MetaboMeeting Conference Proceedings
Poster de conférence hal-01722035v1
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PhytoHub V1.4: A new release for the online database dedicated to food phytochemicals and their human metabolites

Andreia Bento da Silva , Franck Giacomoni , Balthazar Pavot , Yoann Fillatre , Joseph Rothwell , et al.
The 1. International Conference on Food Bioactives & Health, Sep 2016, Norwich, United Kingdom. 2016
Poster de conférence hal-01607427v1
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A computational solution to automatically map metabolite libraries in the context of genome scale metabolic networks

Benjamin Merlet , Nils Paulhe , Florence Vinson , Clément Frainay , Maxime Chazalviel , et al.
Frontiers in Molecular Biosciences, 2016, 3, ⟨10.3389/fmolb.2016.00002⟩
Article dans une revue hal-02631089v1

PeakForest: a spectral reference database made from metabolomic experts for metabolomic analyses

Nils Paulhe , Pierrick Roger , Marie-Françoise Olivier , Marie Lefebvre , Christophe Duperier , et al.
9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015
Poster de conférence hal-02742964v1

Can we Trust Untargeted Metabolomics: Results of the Metabo-ring Initiative, a Large-scale Multi-instruments Inter-laboratoire Study

Jean-Charles Martin , Mathieu Maillot , Gerard Mazerolles , Alexandre Verdu , Bernard Lyan , et al.
9. Annual Conference of the Metabolomics Society, Jul 2013, Glasgow, United Kingdom. 2013, 9th Annual Conference of the Metabolomics Society
Poster de conférence hal-01123136v1
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The future of metabolomics in ELIXIR

M. van Rijswijk , C. Beirnaert , C. Caron , M. Cascante , V. Dominguez , et al.
F1000Research, 2017, 6 (Version 2), ⟨10.12688/f1000research.12342.2⟩
Article dans une revue hal-01630635v1

Vers une "Galaxy" Métabolomique?

Pierre Pericard , Gildas Le Corguillé , Ursula Czerwinska , Marion Landi , Franck Giacomoni , et al.
7. Journées scientifiques du Réseau Français de Métabolomique et de Fluxomique (RFMF), Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., Jun 2013, Amiens, France
Communication dans un congrès hal-02748261v1
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Workflow4Metabolomics:Towards an international computing infrastructure and a tools showcase for Metabolomics

Gildas Le Corguillé , Franck Giacomoni , Christophe Caron
GCC2017 Galaxy Community Conferences, Jun 2017, Montpellier, France. 2017
Poster de conférence hal-01604843v1
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A new chemical library of food compounds and food-derived metabolites developed in FOODBALL

Claudine Manach , C. Weinert , Estelle Pujos-Guillot , M. Ulaszewska , L.O Dragsted , et al.
12. Conference on Mechanisms of a Long-Llife Health, 2015, Barcelone, Spain. 2015, NuGOweek 2015. 12th Edition. Mechanisms of a Long-Llife Health
Poster de conférence hal-02742114v1

PeakForest: a spectral reference database made from metabolomic experts for metabolomic analyses

Nils Paulhe , Pierrick Roger , Marie-Françoise Olivier , Marie Lefebvre , Christophe Duperier , et al.
9. Journées scientifiques du RFMF, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., Jun 2015, Lille, France
Communication dans un congrès hal-02742965v1
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Can we Trust Untargeted Metabolomics: Results of the Metabo-ring Initiative, a Large-scale Multi-instruments Inter-laboratoire Study

Jean-Charles Martin , Mathieu Maillot , Gerard Mazerolles , Alexandre Verdu , Bernard Lyan , et al.
Metabolomics, 2015, 11 (4), pp.807-821. ⟨10.1007/s11306-014-0740-0⟩
Article dans une revue hal-01123343v1

Métabolomique appliquée à la nutrition humaine

Stéphanie Durand , Corinne Pouyet , Mélanie Petera , Franck Giacomoni , Blandine Comte , et al.
Bioprocédés et bioproductions, 2022, ⟨10.51257/a-v1-re296⟩
Article dans une revue hal-03920718v1
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Machine learning-based classification to improve Gas Chromatography-Mass spectrometry data processing.

Yoann Gloaguen , Nico Borgsmüller , Tobias Opialla , Eric Blanc , Emilie Sicard , et al.
European RFMF Metabomeeting 2020, Jan 2020, Toulouse, France. 263 p., 2020, Oral and poster abstracts European RFMF Metabomeeting 2020
Poster de conférence hal-02505901v1
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Spectral Database: from data model to web interface

Nils Paulhe , Christophe Duperier , Daniel Jacob , Etienne Thévenot , Jean-Francois Martin , et al.
8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 2014
Poster de conférence hal-02742064v1
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Metabolite reporting within large-scale studies: where do we stand?

Ghina Hajjar , Franck Giacomoni , Blandine Comte , Estelle Pujos-Guillot
Metabolomics, Jun 2022, Valencia, Spain
Poster de conférence hal-03775496v1

FORUM: Building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases

Maxime Delmas , Olivier Filangi , Nils Paulhe , Florence Vinson , Christophe Duperier , et al.
2021
Pré-publication, Document de travail hal-03318295v1