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Chromatin and epigenetics in development: blending cellular memory with cell fate plasticity

 Giacomo Cavalli
Development (Cambridge, England), 2006, 133, pp.2089-2094. ⟨10.1242/dev.02402⟩
Article dans une revue hal-00069805v1

Uncovering a tumor-suppressor function for Drosophila polycomb group genes.

 Am Martinez , Giacomo Cavalli
Cell Cycle, 2010, 9, pp.2. ⟨10.4161/cc.9.2.10518⟩
Article dans une revue hal-00450667v1

PRC2 Controls Drosophila Oocyte Cell Fate by Repressing Cell Cycle Genes

 N. Iovino , F. Ciabrelli , Giacomo Cavalli
Developmental Cell, 2013, 26 (4), pp.431-439. ⟨10.1016/j.devcel.2013.06.021⟩
Article dans une revue hal-00875218v1
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Modeling epigenome folding: formation and dynamics of topologically associated chromatin domains

 Daniel Jost , Pascal Carrivain , Giacomo Cavalli , Cédric Vaillant
Nucleic Acids Research, 2014, 42 (15), pp.9556-9561. ⟨10.1093/nar/gku698⟩
Article dans une revue hal-01064092v1

Polycomb group-dependent Cyclin A repression in Drosophila.

 Am Martinez , S. Colomb , S. Dejardin , Frederic Bantignies , Giacomo Cavalli
Genes and Development, 2006, 20, pp.501-513. ⟨10.1101/gad.357106⟩
Article dans une revue hal-00069818v1

Topological organization of Drosophila hox genes using DNA fluorescent in situ hybridization

 Frederic Bantignies , Giacomo Cavalli
Methods in Molecular Biology, 2014, 1196, pp.130-120. ⟨10.1007/978-1-4939-1242-1_7⟩
Article dans une revue hal-01059176v1

Identification of Regulators of the Three-Dimensional Polycomb Organization by a Microscopy-Based Genome-wide RNAi Screen

 I. Gonzalez , J. Mateos-Langerak , Aubin Thomas , T. Cheutin , Giacomo Cavalli
Molecular Cell, 2014, 54 (3), pp.485-499. ⟨10.1016/j.molcel.2014.03.004⟩
Article dans une revue hal-01002712v1
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Regulation of single-cell genome organization into TADs and chromatin nanodomains

 Quentin Szabo , Axelle Donjon , Ivana Jerković , Giorgio Papadopoulos , Thierry Cheutin , et al.
Nature Genetics, 2020, 52 (11), pp.1151-1157. ⟨10.1038/s41588-020-00716-8⟩
Article dans une revue hal-02991051v2
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Polycomb controls gliogenesis by regulating the transient expression of the gcm/glide fate determinant

 A. Popkova , R. Bernardoni , C. Diebold , V. van de Bor , B. Schuettengruber , et al.
PLoS Genetics, 2012, 8 (12), pp.e1003159. ⟨10.1371/journal.pgen.1003159⟩
Article dans une revue hal-00773681v1

Technical Review: A Hitchhiker's Guide to Chromosome Conformation Capture.

 Stefan Grob , Giacomo Cavalli
Methods in Molecular Biology, 2018, pp.233-246. ⟨10.1007/978-1-4939-7318-7_14⟩
Article dans une revue hal-01630877v1
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Higher-Order Chromosomal Structures Mediate Genome Function

 Ivana Jerković , Quentin Szabo , Frédéric Bantignies , Giacomo Cavalli
Journal of Molecular Biology, 2020, 432 (3), pp.676-681. ⟨10.1016/j.jmb.2019.10.014⟩
Article dans une revue hal-02990848v1

Polyhomeotic has a tumor suppressor activity mediated by repression of Notch signaling

 Am Martinez , B. Schuettengruber , S. Sakr , A. Janic , C. Gonzalez , et al.
Nature Genetics, 2009, 41 (10), pp.1076-1082. ⟨10.1038/ng.414⟩
Article dans une revue hal-00429476v1

Three-Dimensional Genome Organization and Function in Drosophila

 Yb Schwartz , Giacomo Cavalli
Genetics, 2017, 205 (1), pp.5-24. ⟨10.1534/genetics.115.185132⟩
Article dans une revue hal-01427837v1

The 3D Genome Shapes Up For Pluripotency

 T. Sexton , Giacomo Cavalli
Cell Stem Cell, 2013, 13 (1), pp.3-4. ⟨10.1016/j.stem.2013.06.013⟩
Article dans une revue hal-00852770v1
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Integrative studies of 3D genome organization and chromatin structure

 Marco Di Stefano , Giacomo Cavalli
Current Opinion in Structural Biology, 2022, 77, pp.102493. ⟨10.1016/j.sbi.2022.102493⟩
Article dans une revue hal-04114081v1
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Epigenetic inheritance in adaptive evolution

 Gonzalo Sabarís , Maximilian Fitz-James , Giacomo Cavalli
Annals of the New York Academy of Sciences, 2023, ⟨10.1111/nyas.14992⟩
Article dans une revue hal-04114105v1
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Topological screen identifies hundreds of Cp190-and CTCF-dependent Drosophila chromatin insulator elements

 Tatyana G Kahn , Mikhail Savitsky , Chikuan Kuong , Caroline Jacquier , Giacomo Cavalli , et al.
Science Advances , 2023, 9 (5), pp.eade0090. ⟨10.1126/sciadv.ade0090⟩
Article dans une revue hal-04114124v1
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SETDB1/NSD-dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers

 Amandine Barral , Gabrielle Pozo , Lucas Ducrot , Giorgio L Papadopoulos , Sandrine Sauzet , et al.
Molecular Cell, 2022, 82 (4), pp.816 - 832.e12. ⟨10.1016/j.molcel.2021.12.037⟩
Article dans une revue hal-03748434v1
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Principles of genome folding into topologically associating domains

 Quentin Szabo , Frederic Bantignies , Giacomo Cavalli
Science Advances , 2019, 5 (4), pp.eaaw1668. ⟨10.1126/sciadv.aaw1668⟩
Article dans une revue hal-02990881v1

Multiscale 3D Genome Rewiring during Mouse Neural Development.

 B Bonev , N Mendelson Cohen , Q Szabo , L Fritsch , Gl Papadopoulos , et al.
Cell, 2017, ⟨10.1016/j.cell.2017.09.043⟩
Article dans une revue hal-01623646v1

Functional implications of genome topology

 Giacomo Cavalli , T. Mistelli
Nature Structural and Molecular Biology, 2013, 20 (3), pp.290-299. ⟨10.1038/nsmb.2474⟩
Article dans une revue hal-00797832v1

Coordinate redeployment of PRC1 proteins suppresses tumor formation during Drosophila development

 V Loubiere , A Delest , Aubin Thomas , B Bonev , B Schuettengruber , et al.
Nature Genetics, 2016, 48 (11), pp.1436-1442. ⟨10.1038/ng.3671⟩
Article dans une revue hal-01393390v1
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Histone H3 Serine 28 Is Essential for Efficient Polycomb-Mediated Gene Repression in Drosophila

 Philip Yuk Kwong , Alexandra Stuetzer , Wolfgang Fischle , Anne-Marie Martinez , Giacomo Cavalli
Cell Reports, 2015, 11 (9), pp.1437-1445. ⟨10.1016/j.celrep.2015.04.055⟩
Article dans une revue hal-01363389v1

A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber.

 I. Comet , B. Schuttengruber , T. Sexton , Giacomo Cavalli
Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (6), pp.2294-2299. ⟨10.1073/pnas.1002059108⟩
Article dans une revue hal-00575106v1

A RING to Rule Them All: RING1 as Silencer and Activator

 Giacomo Cavalli
Developmental Cell, 2014, 28 (1), pp.1-2. ⟨10.1016/j.devcel.2013.12.015⟩
Article dans une revue hal-00933302v1
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Pericentromeric heterochromatin is hierarchically organized and spatially contacts H3K9me2 islands in euchromatin

 Yuh Chwen G. Lee , Yuki Ogiyama , Nuno Martins , Brian Beliveau , David Acevedo , et al.
PLoS Genetics, 2020, 16 (3), pp.e1008673. ⟨10.1371/journal.pgen.1008673⟩
Article dans une revue hal-02999355v1

PRE-Mediated Bypass of Two Su(Hw) Insulators Targets PcG Proteins to a Downstream Promoter.

 I. Comet , E. Savitskaya , B. Schuettengruber , N. Negre , S. Lavrov , et al.
Developmental Cell, 2006, 11, pp.117-124. ⟨10.1016/j.devcel.2006.05.009⟩
Article dans une revue hal-00086918v1

Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions.

 C. Lanctot , T. Cheutin , M. Cremer , Giacomo Cavalli , T. Cremer
Nature Reviews Genetics, 2007, 8 (2), pp.104-112. ⟨10.1038/nrg2041⟩
Article dans une revue hal-00137143v1
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Transient loss of Polycomb components induces an epigenetic cancer fate

 Victoria Parreno , Vincent Loubiere , Bernd Schuettengruber , Maksim Erokhin , Balázs Győrffy , et al.
2023
Pré-publication, Document de travail hal-04252107v1
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Global chromatin conformation differences in the Drosophila dosage compensated chromosome X

 Koustav Pal , Mattia Forcato , Daniel Jost , Thomas Sexton , Cédric Vaillant , et al.
Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-019-13350-8⟩
Article dans une revue hal-02386022v1
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