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  • IdHAL : gabriel-paes
Number of documents

61

Gabriel Paës - List of Publications


Journal articles39 documents

  • Claire Mayer-Laigle, Laurence Foulon, Clément Denoual, Miguel Pernes, Eric Rondet, et al.. Flax shives-PBAT processing into 3D printed fluorescent materials with potential sensor functionalities. Industrial Crops and Products, Elsevier, 2021, 167, pp.1-11. ⟨10.1016/j.indcrop.2021.113482⟩. ⟨hal-03212290⟩
  • Aya Zoghlami, Yassin Refahi, Christine Terryn, Gabriel Paës. Three-Dimensional Imaging of Plant Cell Wall Deconstruction Using Fluorescence Confocal Microscopy. Green and Sustainable Chemistry, Scientific Research, 2020, 1 (2), pp.75-85. ⟨10.3390/suschem1020007⟩. ⟨hal-02980589⟩
  • Claire Bourlieu, Thierry Astruc, Sophie Barbe, Jean-Guy Berrin, Estelle Bonnin, et al.. Enzymes to unravel bioproducts architecture. Biotechnology Advances, Elsevier, 2020, 41, pp.107546. ⟨10.1016/j.biotechadv.2020.107546⟩. ⟨hal-02553024⟩
  • Christine Terryn, Anouck Habrant, Gabriel Paës, Corentin Spriet. Measuring Interactions between Fluorescent Probes and Lignin in Plant Sections by sFLIM Based on Native Autofluorescence. Journal of visualized experiments : JoVE, JoVE, 2020, ⟨10.3791/59925⟩. ⟨hal-02949283⟩
  • Florent Allais, Xavier Coqueret, Thomas Farmer, Warwick Raverty, Caroline Rémond, et al.. Editorial: From Biomass to Advanced Bio-Based Chemicals & Materials: A Multidisciplinary Perspective. Frontiers in Chemistry, Frontiers Media, 2020, 8, ⟨10.3389/fchem.2020.00131⟩. ⟨hal-02919858⟩
  • Aya Zoghlami, Yassin Refahi, Christine Terryn, Gabriel Paës. Multimodal characterization of acid-pretreated poplar reveals spectral and structural parameters strongly correlate with saccharification. Bioresource Technology, Elsevier, 2019, 293, ⟨10.1016/j.biortech.2019.122015⟩. ⟨hal-02623521⟩
  • Aya Zoghlami, Gabriel Paës. Lignocellulosic Biomass: Understanding Recalcitrance and Predicting Hydrolysis. Frontiers in Chemistry, Frontiers Media, 2019, 7, pp.1-11. ⟨10.3389/fchem.2019.00874⟩. ⟨hal-03016183⟩
  • Céline Badouard, Fanny Traon, Clément Denoual, Claire Mayer-Laigle, Gabriel Paës, et al.. Exploring mechanical properties of fully compostable flax reinforced composite filaments for 3D printing applications. Industrial Crops and Products, Elsevier, 2019, 135, pp.246-250. ⟨10.1016/j.indcrop.2019.04.049⟩. ⟨hal-02154573⟩
  • Gabriel Paës, David Navarro, Yves Benoit, Senta Blanquet, Brigitte Chabbert, et al.. Tracking of enzymatic biomass deconstruction by fungal secretomes highlights markers of lignocellulose recalcitrance. Biotechnology for Biofuels, BioMed Central, 2019, 12 (1), ⟨10.1186/s13068-019-1417-8⟩. ⟨hal-02152203⟩
  • Samir Kasmi, Antoine Gallos, Johnny Beaugrand, Gabriel Paës, Florent Allais. Ferulic acid derivatives used as biobased powders for a convenient plasticization of polylactic acid in continuous hot-melt process. European Polymer Journal, Elsevier, 2019, 110, pp.293-300. ⟨10.1016/j.eurpolymj.2018.11.036⟩. ⟨hal-02154507⟩
  • Eléonore Lambert, Delphine Dessaint, Laurence Foulon, Brigitte Chabbert, Gabriel Paës, et al.. Real Time and Quantitative Imaging of Lignocellulosic Films Hydrolysis by Atomic Force Microscopy Reveals Lignin Recalcitrance at Nanoscale. Biomacromolecules, American Chemical Society, In press, 20 (1), pp.515-527. ⟨10.1021/acs.biomac.8b01539⟩. ⟨hal-02510434⟩
  • Brigitte Chabbert, Christine Terryn, Mickaël Herbaut, Alankar Vaidya, Anouck Habrant, et al.. Fluorescence techniques can reveal cell wall organization and predict saccharification in pretreated wood biomass. Industrial Crops and Products, Elsevier, 2018, 123, pp.84-92. ⟨10.1016/j.indcrop.2018.06.058⟩. ⟨hal-01854614⟩
  • Gabriel Paës, Anouck Habrant, Christine Terryn. Fluorescent Nano-Probes to Image Plant Cell Walls by Super-Resolution STED Microscopy. Plants, MDPI, 2018, 7 (1), ⟨10.3390/plants7010011⟩. ⟨hal-02154463⟩
  • Mickaël Herbaut, Aya Zoghlami, Anouck Habrant, Xavier Falourd, Loic Foucat, et al.. Multimodal analysis of pretreated biomass species highlights generic markers of lignocellulose recalcitrance. Biotechnology for Biofuels, BioMed Central, 2018, 11 (1), pp.1-17. ⟨10.1186/s13068-018-1053-8⟩. ⟨hal-02625480⟩
  • Mickaël Herbaut, Aya Zoghlami, Gabriel Paës. Dynamical assessment of fluorescent probes mobility in poplar cell walls reveals nanopores govern saccharification. Biotechnology for Biofuels, BioMed Central, 2018, 11, pp.1-13. ⟨10.1186/s13068-018-1267-9⟩. ⟨hal-02623630⟩
  • Christine Terryn, Gabriel Paës, Corentin Spriet. FRET-SLiM on native autofluorescence: A fast and reliable method to study interactions between fluorescent probes and lignin in plant cell wall. Plant Methods, BioMed Central, 2018, 14 (1), ⟨10.1186/s13007-018-0342-3⟩. ⟨hal-01898827⟩
  • Thomas Auxenfans, Christine Terryn, Gabriel Paës. Seeing biomass recalcitrance through fluorescence. Scientific Reports, Nature Publishing Group, 2017, 7 (1), ⟨10.1038/s41598-017-08740-1⟩. ⟨hal-01602695⟩
  • Kamal Kansou, Caroline Rémond, Gabriel Paës, Estelle Bonnin, Jean Tayeb, et al.. Testing scientific models using qualitative reasoning: Application to cellulose hydrolysis. Scientific Reports, Nature Publishing Group, 2017, 7, ⟨10.1038/s41598-017-14281-4⟩. ⟨hal-02625445⟩
  • Brigitte Chabbert, Anouck Habrant, Mickaël Herbaut, Laurence Foulon, Véronique Aguié-Béghin, et al.. Action of lytic polysaccharide monooxygenase on plant tissue is governed by cellular type. Scientific Reports, Nature Publishing Group, 2017, 7 (1), pp.17792 - 17792. ⟨10.1038/s41598-017-17938-2⟩. ⟨hal-01701160⟩
  • Antoine Gallos, Gabriel Paës, David Legland, Florent Allais, Johnny Beaugrand. Exploring the microstructure of natural fibre composites by confocal Raman imaging and image analysis. Composites Part A: Applied Science and Manufacturing, Elsevier, 2017, 94, pp.32-40. ⟨10.1016/j.compositesa.2016.12.005⟩. ⟨hal-01607502⟩
  • Antoine Gallos, Gabriel Paës, David Legland, Johnny Beaugrand, Florent Allais. Microstructural and Chemical Approach To Highlight How a Simple Methyl Group Affects the Mechanical Properties of a Natural Fibers Composite. ACS Sustainable Chemistry & Engineering, American Chemical Society, 2017, 5 (11), pp.10352-10360. ⟨10.1021/acssuschemeng.7b02399⟩. ⟨hal-02629208⟩
  • Gabriel Paës, Anouck Habrant, Jordane Ossemond, Brigitte Chabbert. Exploring accessibility of pretreated poplar cell walls by measuring dynamics of fluorescent probes. Biotechnology for Biofuels, BioMed Central, 2017, 10, ⟨10.1186/s13068-017-0704-5⟩. ⟨hal-01603940⟩
  • Antoine Gallos, Gabriel Paës, Florent Allais, Johnny Beaugrand. Lignocellulosic fibers: a critical review of the extrusion process for enhancement of the properties of natural fiber composites. RSC Advances, Royal Society of Chemistry, 2017, 7 (55), pp.34638-34654. ⟨10.1039/C7RA05240E⟩. ⟨hal-01607627⟩
  • Thomas Auxenfans, David Crônier, Brigitte Chabbert, Gabriel Paës. Understanding the structural and chemical changes of plant biomass following steam explosion pretreatment. Biotechnology for Biofuels, BioMed Central, 2017, 10, pp.1-16. ⟨10.1186/s13068-017-0718-z⟩. ⟨hal-01602522⟩
  • Fong M, Berrin Jg, Gabriel Paës. Investigation of the binding properties of a multi-modular GH45 cellulase using bioinspired model assemblies. Biotechnology for Biofuels, BioMed Central, 2016, 9, ⟨10.1186/s13068-016-0428-y⟩. ⟨hal-01450838⟩
  • Gabriel Paës, Laura von Schantz, Mats Ohlin. Bioinspired assemblies of plant cell wall polymers unravel the affinity properties of carbohydrate-binding modules. Soft Matter, Royal Society of Chemistry, 2015, 11 (33), pp.6586-6594. ⟨10.1039/C5SM01157D⟩. ⟨hal-01269367⟩
  • Gabriel Paës. Fluorescent probes for exploring plant cell wall deconstruction: a review. Molecules, MDPI, 2014, 19 (7), pp.9380-9402. ⟨10.3390/molecules19079380⟩. ⟨hal-01268930⟩
  • Gabriel Paës, Sally Burr, Marie-Belle Saab, Michaël Molinarie, Véronique Aguié-Béghin, et al.. Modeling progression of fluorescent probes in bioinspired lignocellulosic assemblies. Biomacromolecules, American Chemical Society, 2013, 14, pp.2196-2205. ⟨10.1021/bm400338b⟩. ⟨hal-02643671⟩
  • Gabriel Paës, Juan Cortés, Thierry Simeon, Michael O'Donohue, Vinh Tran. Thumb-loops up for catalysis: a structure/function investigation of a functional loop movement in a GH11 xylanase. Computational and Structural Biotechnology Journal, Elsevier, 2012, 1 (2), pp.e201207001. ⟨10.5936/csbj.201207001⟩. ⟨hal-01267831⟩
  • Gabriel Paës, Jean-Guy Berrin, Johnny Beaugrand. GH11 xylanases: structure/function/properties relationships and applications. Biotechnology Advances, Elsevier, 2012, 30 (3), pp.564-592. ⟨10.1016/j.biotechadv.2011.10.003⟩. ⟨hal-01267767⟩
  • Gabriel Paës, Brigitte Chabbert. Characterization of Arabinoxylan/Cellulose Nanocrystals Gels to Investigate Fluorescent Probes Mobility in Bioinspired Models of Plant Secondary Cell Wall. Biomacromolecules, American Chemical Society, 2012, 13 (1), pp.206-214. ⟨10.1021/bm201475a⟩. ⟨hal-01267781⟩
  • Laetitia Poidevin, Anthony Levasseur, Gabriel Paës, David Navarro, S. Heiss-Blanquet, et al.. Heterologous production of the Piromyces equi cinnamoyl esterase in Trichoderma reesei for biotechnological applications. Letters in Applied Microbiology, Wiley, 2009, 49 (6), pp.673-678. ⟨10.1111/j.1472-765X.2009.02734.x⟩. ⟨hal-02668642⟩
  • Gabriel Paës, Lars Skov, Michael O Donohue, Caroline Rémond, Jette Kastrup, et al.. The Structure of the Complex between a Branched Pentasaccharide and Thermobacillus xylanilyticus GH-51 Arabinofuranosidase Reveals Xylan-Binding Determinants and Induced Fit. Biochemistry, American Chemical Society, 2008, 47 (28), pp.7441-7451. ⟨10.1021/bi800424e⟩. ⟨hal-02668354⟩
  • Gabriel Paës, Vinh Tran, Masayuki Takahashi, Imen Boukari, Michael O Donohue. New insights into the role of the thumb-like loop in GH-11 xylanases. Protein Engineering, Design and Selection, Oxford University Press (OUP), 2007, 20 (1), pp.15-23. ⟨10.1093/protein/gzl049⟩. ⟨hal-02659467⟩
  • Gabriel Paës, Michael O Donohue. Engineering increased thermostability in the thermostable GH-11 xylanase from Thermobacillus xylanilyticus. Journal of Biotechnology, Elsevier, 2006, 125 (3), pp.338-350. ⟨10.1016/j.jbiotec.2006.03.025⟩. ⟨hal-02660155⟩
  • Johnny Beaugrand, Gabriel Paës, Danièle Reis, Masayuki Takahashi, Philippe Debeire, et al.. Probing the cell-wall heterogeneity of micro-dissected wheat caryopsis using well-characterized active and non-active GH11 xylanases. Planta, Springer Verlag, 2005, 222 (2), pp.246-257. ⟨10.1007/s00425-005-1538-0⟩. ⟨hal-02675507⟩
  • Kristian Sass Bak-Jensen, Gwenaelle Andre-Leroux, Tine E. Gottschalk, Gabriel Paës, Vinh Tran, et al.. Tyrosine 105 and Threonine 212 at Outermost Substrate Binding Subsites –6 and +4 Control Substrate Specificity, Oligosaccharide Cleavage Patterns, and Multiple Binding Modes of Barley α-Amylase. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2004, 279 (11), pp.10093-10102. ⟨10.1074/jbc.M312825200⟩. ⟨hal-01607712⟩
  • Johnny Beaugrand, Gérard Chambat, Vicky W.K. Wong, Florence Goubet, Caroline Rémond, et al.. Impact and efficiency of GH10 and GH11 thermostable endoxylanases on wheat bran and alkali-extractable arabinoxylans. Carbohydrate Research, Elsevier, 2004, 339 (15), pp.2529-2540. ⟨10.1016/j.carres.2004.08.012⟩. ⟨hal-02681326⟩
  • J. Beaugrand, G. Chambat, V.W.K. Wong, F. Goubet, C. Remond, et al.. Impact and efficiency of GH10 and GH11 thermostable endoxylanases on wheat bran and alkali-extractable arabinoxylans. Carbohydrate Research, Elsevier, 2004, pp.2529-2540. ⟨hal-00306773⟩

Conference papers22 documents

  • Aya Zoghlami, Christine Terryn, Yassin Refahi, Gabriel Paës. Raman spectroscopy as a predictor of poplar enzymatic hydrolysis. ACS spring 2021, Apr 2021, Virtual, United States. ⟨hal-03212314⟩
  • Amandine Leroy, Xavier Falourd, Loïc Foucat, Valérie Méchin, Fabienne Guillon, et al.. Multiscale analysis of the influence of hot water pretreatment: consequences on lignocellulosic biomass recalcitrance. 29th EUBCE, Apr 2021, Marseille, France. ⟨hal-03212353⟩
  • Gabriel Paës. Predicting lignocellulosic recalcitrance to optimise biofuel production. 29th EUBCE, Apr 2021, Marseille, France. ⟨hal-03212305⟩
  • Gabriel Paës. Modélisation de la progression d’enzymes dans des assemblages et parois lignocellulosiques. Colloque Arbre, Bois, Forêt et Sociétés, Mar 2021, Bordeaux, France. ⟨hal-03212363⟩
  • Claire Mayer-Laigle, Eric Rondet, Cecile Barron, Alain Bourmaud, Gabriel Paës. 3D printing of flax shives conjugated to fluorophores to design 4D pH-responsive biobased materials. ACS spring meeting, Apr 2021, Virtual, United States. ⟨hal-03212337⟩
  • Yassin Refahi, Gabriel Paës. Image-based computational approach to optimize lignocellulosic biomass conversion. ACS spring meeting, American Chemical Society, Apr 2021, Virtual, United States. ⟨hal-03212327⟩
  • Gabriel Paës. Fluorescence as a versatile method to characterize lignocellulose. National Meeting of the American-Chemical-Society (ACS), Mar 2019, Orlando, United States. ⟨hal-02788516⟩
  • Stéphanie Baumberger, Jean-Guy Berrin, Cesar Arturo Aceves-Lara, Violaine Athes, J. Beaugrand, et al.. Towards an optimized deconstruction of lignocellulosic biomass: from cell wall characterization to process modeling (présentation orale). EWLP - 13th European Workshop on Lignocellulosics and Pulp, 2014, Seville, Spain. ⟨hal-01598168⟩
  • Gabriel Paës, Laura von Schantz, Mats Ohlin. New insights into mobility and affinity of engineered family 4 CBMs in bioinspired lignocellulosic assemblies. 247. ACS National Meeting - Chemistry & Materials for Energy, Mar 2014, Dallas, United States. ⟨hal-01268552⟩
  • Gabriel Paës, Brigitte Chabbert. Les F-techniques révèlent la progression de sondes fluorescentes dans les parois lignocellulosiques. Journées du Réseau Français des Parois, 2014, Amiens, France. ⟨hal-01269097⟩
  • Alexis Rebeyrol, Amadou Ndiaye, Patrice Buche, Abdellatif Barakat, Cédric Baudrit, et al.. Knowledge book on lignocellulose deconstruction: an INRA project to identify key actions in research on biorefineries. 3. Symposium on Biotechnology Applied to Lignocellulose, Oct 2014, Concepcion, Chile. ⟨10.13140/2.1.1299.3607⟩. ⟨hal-01195521⟩
  • Gabriel Paës, Hassen Douzane, Jordane Ossemond, Véronique Tabone, Caroline Rémond, et al.. Tracking fluorescent enzymes to unravel limitations to lignocellulosic biomass degradation. 247. ACS National Meeting - Chemistry & Materials for Energy, Mar 2014, Dallas, United States. ⟨hal-01268551⟩
  • Gabriel Paës, Sally Burr, Marie-Belle Saab, Michaël Molinari, Véronique Aguié-Béghin, et al.. Modelling progression of fluorescent probes in bioinspired lignocellulosic assemblies. 3. EPNOE International Polysaccharide Conference, Oct 2013, Nice, France. ⟨hal-01268550⟩
  • Gabriel Paës, Sally Burr, Michaël Molinari, Véronique Aguié-Béghin, Brigitte Chabbert. Bioinspired lignocellulosic polymers assemblies to unravel features determining mobility of fluorescent probes. 21. Bio-Environmental Polymer Society (BEPS) Annual Meeting, Sep 2013, warwick, United Kingdom. ⟨hal-01268170⟩
  • Gabriel Paës, Sally Burr, Brigitte Chabbert. Oxidative enzymes as essential tools for preparing bio-inspired models of plant secondary cell walls. Oxizymes, Sep 2012, Marseille, France. ⟨hal-01268171⟩
  • Gabriel Paës, Brigitte Chabbert. Fluorescent probes as tools to investigate plant cell wall architecture by FRAP. Focus on Microscopy, Apr 2011, Constance, Germany. ⟨hal-02802821⟩
  • Gabriel Paës, Brigitte Chabbert. Fluorescent probes as tools to investigate plant cell wall architecture by FRAP in bioinspored lignocellulosic systems. EPNOE 2011: 2. International Polysaccharide Conference, Wageningen University and Research Centre (WUR). Wageningen, NLD., Aug 2011, Wageningen, Netherlands. ⟨hal-02808316⟩
  • Gabriel Paës, Véronique Aguié-Béghin, Brigitte Chabbert. Fluorescent probes as tools to investigate secondary plant cell wall architecture by FRAP in arabinoxylan gels. 6. European Symposium on Enzymes in Grain Processing (ESEGP 2011), Nov 2011, Copenhague, Denmark. 1 p. ⟨hal-02744580⟩
  • Brigitte Chabbert, Gabriel Paës, Véronique Aguié-Béghin. Designing bio-inspired polymer assemblies to unravel lignocelluloses properties. 19. Annual Meeting of the Bioenvironmental Polymer Society- BEPS., Sep 2011, Vienne, Austria. ⟨hal-02745651⟩
  • Gabriel Paës, Anouck Habrant, Brigitte Chabbert. Use of fluorescent FITC-labelled dextran for investigating diffusion in arabinoxylan gels by confocal laser scanning microscopy. IMC17: International Microscopy Congress 2010, Pontificia Universidade Católica do Rio de Janeiro. Department of Materials Science and Metallurgy, Rio de Janeiro, BRA., Sep 2010, Rio de Janeiro, Brazil. ⟨hal-02813133⟩
  • Gabriel Paës, Juan Cortés, Thierry Simeon, Michael O'Donohue, Vinh Tran. Coupling robotics and molecular modelling techniques to understand putative functional motion of the thumb-loop in GH-11 xylanase from Thermobacillus xylanilyticus. Lignobiotech One - 2010: 1. Symposium on Biotechnology Applied to Lignocelluloses (Lignobiotech One), Institut National de Recherche Agronomique (INRA). UMR Fractionnement des AgroRessources et Environnement (0614)., Mar 2010, Reims, France. ⟨hal-02815698⟩
  • Gabriel Paës, Juan Cortés, Thierry Simeon, Michael O'Donohue, Vinh Tran. Thumb-loops up for catalysis: a structure/function investigation of a functional loop movement in a GH-11 xylanase. Biomass-derived Pentoses : from Biotechnology to Fine Chemistry 2010, Nov 2010, Reims, France. ⟨hal-02822653⟩