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52

Frédéric de Lamotte - Data Scientist


Journal articles32 documents

  • Cécile Fleury, Jérôme Gracy, Marie-Françoise Gautier, Jean-Luc Pons, Jean-François Dufayard, et al.. Comprehensive classification of the plant non-specific lipid transfer protein superfamily towards its Sequence -Structure -Function analysis. PeerJ, PeerJ, 2019, 7, pp.e7504. ⟨10.7287/peerj.preprints.27687v1⟩. ⟨hal-02112505⟩
  • Cécile Fleury, Jérôme Gracy, Marie-Françoise Gautier, Jean-Luc Pons, Jean-François Dufayard, et al.. Comprehensive classification of the plant non-specific lipid transfer protein superfamily towards its sequence–structure–function analysis. PeerJ, PeerJ, 2019, 7, pp.e7504. ⟨10.7717/peerj.7504⟩. ⟨hal-02266388⟩
  • Floréal Cabanettes, Jean-François Dufayard, Vincent Berry, Vincent Lefort, Frederic de Lamotte Guéry, et al.. CompPhy2: a flexible and real time collaborative web platform for editing and comparing phylogenies. Bioinformatics, Oxford University Press (OUP), In press, In Press, pp.1-3. ⟨hal-01885401⟩
  • Jean-François Dufayard, Delphine Larivière, Manuel Ruiz, Frederic de Lamotte Guéry. RapGreen, a Java package to analyse, display and explore interactively phylogenetic trees. Bioinformatics, Oxford University Press (OUP), 2018, In Press. ⟨hal-01885400⟩
  • Valentin Guignon, Yann Hueber, Mathieu Rouard, Stéphanie Bocs, David Couvin, et al.. The South Green portal: a comprehensive resource for tropical and Mediterranean crop genomics. Current Plant Biology, Elsevier, 2016, 7-8, pp.6-9. ⟨10.1016/j.cpb.2016.12.002⟩. ⟨hal-02631148⟩
  • Julien Frouin, Denis Filloux, James Taillebois, Cecile Grenier, Fabienne Montes, et al.. Positional cloning of the rice male sterility gene ms-IR36, widely used in the inter-crossing phase of recurrent selection schemes. Molecular Breeding, Springer Verlag, 2014, 33 (3), pp.555-567. ⟨10.1007/s11032-013-9972-3⟩. ⟨hal-02635292⟩
  • Michelle G. Cotta, Leila M. G. Barros, Juliana D. de Almeida, Frederic de Lamotte Guéry, Eder A. Barbosa, et al.. Lipid transfer proteins in coffee: isolation of Coffea orthologs, Coffea arabica homeologs, expression during coffee fruit development and promoter analysis in transgenic tobacco plants. Plant Molecular Biology, Springer Verlag (Germany), 2014, 85 (1-2), pp.11 - 31. ⟨10.1007/s11103-013-0166-5⟩. ⟨hal-01268596⟩
  • Soaharin'Ny Ony Raoseta Rakotondralambo, Marguerite Rodier-Goud, Ronan Rivallan, Alexandra Lussert, Pascal Danthu, et al.. Insight into the biology, genetics and evolution of the Centella asiatica polyploid complex in Madagascar. Industrial Crops and Products, Elsevier, 2013, 47, pp.118 - 125. ⟨10.1016/j.indcrop.2013.02.022⟩. ⟨hal-01268112⟩
  • Julien Wollbrett, Pierre Larmande, Frederic de Lamotte Guéry, Manuel Ruiz. Clever generation of rich SPARQL queries from annotated relational schema: application to Semantic Web Service creation for biological databases. BMC Bioinformatics, BioMed Central, 2013, 14, ⟨10.1186/1471-2105-14-126⟩. ⟨hal-01268129⟩
  • Marine Deon, Yanice Bourré, Stéphanie Gimenez, Angélique Berger, Daniel Bieysse, et al.. Characterization of a cassiicolin-encoding gene from Corynespora cassiicola, pathogen of rubber tree (Hevea brasiliensis). Plant Science, Elsevier, 2012, 185, pp.227-237. ⟨10.1016/j.plantsci.2011.10.017⟩. ⟨hal-00964742⟩
  • Elumalai Sunderasan, Rusni A. Kadir, Valérie Pujade-Renaud, Frédéric de Lamotte, Hoong Yeet Yeang, et al.. Single-chain variable fragments antibody specific to Corynespora cassiicola toxin, cassiicolin, reduces necrotic lesion formation in Hevea brasiliensis. Journal of General Plant Pathology, Springer Verlag, 2009, 15 (1), pp.19-26. ⟨10.1007/s10327-008-0137-x⟩. ⟨hal-02668957⟩
  • Frederic de Lamotte Guéry. 11. International Symposium on BioChromatography and Nanoseparation preface. Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, Elsevier, 2009, 877 (24), pp.2419-2419. ⟨10.1016/j.jchromb.2009.01.029⟩. ⟨hal-02657183⟩
  • Frédéric de Lamotte, Marie-Pierre Duviau, Christine Sanier, Robert Thai, Joël Poncet, et al.. Purification and characterization of cassiicolin, the toxin produced by Corynespora cassiicola, causal agent of the leaf fall disease of rubber tree. Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, Elsevier, 2007, 849 (1-2), pp.357-362. ⟨10.1016/j.jchromb.2006.10.051⟩. ⟨hal-02668494⟩
  • Philippe Barthe, Valérie Pujade-Renaud, Frédéric Breton, Daniel Gargani, Robert Thai, et al.. Structural analysis of cassiicolin, a host-selective protein toxin from Corynespora cassiicola. Journal of Molecular Biology, Elsevier, 2007, 367 (1), pp.89-101. ⟨10.1016/j.jmb.2006.11.086⟩. ⟨hal-02665937⟩
  • Philippe Barthe, Valérie Pujade-Renaud, Frédéric Breton, Daniel Gargani, Robert Thai, et al.. Structural Analysis of Cassiicolin, a Host-selective Protein Toxin from Corynespora cassiicola. Journal of Molecular Biology, Elsevier, 2007, 367 (1), pp.89-101. ⟨10.1016/j.jmb.2006.11.086⟩. ⟨cea-02000233⟩
  • Arnaud Dupuy d'Angeac, Ilias Stefas, Hubert Graafland, Frédéric de Lamotte, Marcel Rucheton, et al.. Biotinylation of glycan chains in beta2 glycoprotein I induces dimerization of the molecule and its detection by the human autoimmune anti-cardiolipin antibody EY2C9. Biochemical Journal, Portland Press, 2006, 393 (1), pp.117-127. ⟨10.1042/BJ20050932⟩. ⟨hal-02659024⟩
  • F. Hoh, J.L. Pons, M.F. Gautier, Frédéric de Lamotte, C. Dumas. Structure of a liganded type 2 non-specific lipid-transfer protein from wheat and the molecular basis of lipid binding. Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2005, 61, pp.397-406. ⟨hal-02674377⟩
  • Philippe Joudrier, Marie Francoise Gautier, Frédéric de Lamotte, Karoly Kobrehel. The thioredoxin h system: potential applications. Biotechnology Advances, Elsevier, 2005, 23 (1), pp.81-85. ⟨10.1016/j.biotechadv.2004.09.003⟩. ⟨hal-02683364⟩
  • Frédéric de Lamotte. Single step purification of a series of wheat recombinant proteins with expanded bed absorption chromatography. Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, Elsevier, 2005, 818, pp.29-33. ⟨hal-02676488⟩
  • François Hoh, Jean-Luc Pons, Marie-Françoise Gautier, Frédéric de Lamotte, Christian Dumas. Structure of a liganded type 2 non-specific lipid-transfer protein from wheat and the molecular basis of lipid binding. Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2005, 61 (4), pp.397-406. ⟨10.1107/S0907444905000417⟩. ⟨hal-02359483⟩
  • Jean-Luc Pons, Frédéric de Lamotte, Marie Francoise Gautier, Marc-André Delsuc. Refined solution structure of a liganded type 2 wheat nonspecific lipid transfer protein. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2003, 278 (16), pp.14249-14256. ⟨10.1074/jbc.M211683200⟩. ⟨hal-02675602⟩
  • A.T. Setterdahl, P.T. Chivers, M. Hirasawa, S.D. Lemaire, E. Keryer, et al.. Effect of pH on the oxidation-reduction properties of thioredoxins. Biochemistry, American Chemical Society, 2003, 42, pp.14877-14884. ⟨hal-02676480⟩
  • Frédéric de Lamotte, Hélène Boze, C. Blanchard, C. Klein, Gabrielle Moulin, et al.. NMR monitoring of accumulation and folding of 15N-labeled protein overexpressed in Pichia pastoris. Protein Expression and Purification, Elsevier, 2001, 22, pp.318-324. ⟨hal-02681588⟩
  • Frédéric de Lamotte, F. Vagner, J.L. Pons, M.F. Gautier, C. Roumestand, et al.. Protein dynamics studies on wheat type 2 lipid transfer protein. Comptes rendus de l’Académie des sciences. Série IIc, Chimie, Elsevier, 2001, 4, pp.839-843. ⟨hal-02674275⟩
  • Frédéric de Lamotte, N. Vianey-Liaud, M.P. Duviau, Karoly Kobrehel. Glutathione reductase in wheat grain. 1. Isolation and characterization. Journal of Agricultural and Food Chemistry, American Chemical Society, 2000, 48, pp.4978-4983. ⟨hal-02698329⟩
  • Frédéric de Lamotte, C. Klein, N. Issaly, M.F. Gautier, Hélène Boze. Single step purification of a wheat 9kDa lipid transfer protein secreted by Pichia pastoris. Biotechnology Techniques, Springer Verlag, 1999, 13, pp.351-354. ⟨hal-02694660⟩
  • M.F. Gautier, Valerie Lullien Pellerin, F. de Lamotte-Guery, Anne-Laure Guirao, Philippe Joudrier. Characterization of wheat thioredoxin h cDNA and production of an active Triticum aestivum protein in Escherichia coli. European Journal of Biochemistry, Wiley, 1998, 252, pp.314-324. ⟨hal-02692932⟩
  • Philippe Joudrier, Remi Alary, Valerie Lullien Pellerin, Frédéric de Lamotte, Karoly Kobrehel, et al.. Apports potentiels de la transgénèse pour l'amélioration de la qualité des blés. Industries des Céréales, 1998, pp.10-14. ⟨hal-02695368⟩
  • C. Klein, F. de Lamotte-Guery, F. Gautier, Gabrielle Moulin, Hélène Boze, et al.. High-level secretion of a wheat lipid transfer protein in Pichia pastoris. Protein Expression and Purification, Elsevier, 1998, 13, pp.73-82. ⟨hal-02692748⟩
  • F. de Lamotte-Guery, Clotilde Pruvost, P. Minard, M.A. Delsuc, M. Miginiac-Maslow, et al.. Structural anf functional roles of a conserved proline residue in the alpha2 helix of Escherichia coli thioredoxin. Protein Engineering, 1997, 10 (12), pp.1425-1432. ⟨hal-02689362⟩
  • Frédéric de Lamotte-Guery, Christian Pruvost, Philippe Minard, Marc-André Delsuc, Myroslawa Miginiac-Maslow, et al.. Structural and functional roles of a conserved proline residue in the alpha2 helix of Escherichia coli thioredoxin.. Protein Engineering, 1997, 10 (12), pp.1425-32. ⟨10.1093/protein/10.12.1425⟩. ⟨hal-00788517⟩
  • F. de Lamotte-Guery, Clotilde Pruvost, P. Minard, M.A. Delsuc, M. Miginiac-Maslow, et al.. Structural and functional roles of a conserved proline residue in the alpha2 helix of Escherichia coli thioredoxin. Protein Engineering, 1997, 10 (12), pp.1425-1432. ⟨hal-02692166⟩

Conference papers14 documents

  • Marine Deon, Dinh Minh Tran, Boris Fumanal, Stéphanie Gimenez, Daniel Bieysse, et al.. Diversité du gène de cassiicoline en lien avec le pouvoir pathogène de C. cassiicola et mise en oeuvre d'un test toxinique pour la sélection d'individus tolérants chez Hevea brasiliensis.. 10. Rencontres de Phytopathologie - Journées Jean Chevaugeon, Societe Francaise de Phytopathologie (SFP). FRA., 2014. ⟨hal-02793856⟩
  • Manuel Ruiz, Cécile Fleury, Frederic de Lamotte Guéry, Marie Francoise Gautier, François Dufayard, et al.. MS-DMind: Multi scale data “minding” for molecular process related to biotic and abiotic stresses: pilot study with the nsLTP superfamily of proteins. Colloque Plant Genomics 2012, Apr 2012, Pont-Royal en Provence, France. ⟨hal-01267785⟩
  • Sophie Charton, Julien Serret, Nathalie Geneix, Brigitte Bouchet, Marie Francoise Gautier, et al.. Rôle de l’amidon synthase IV chez le riz. Colloque Graines 2011, Oct 2011, Nantes, France. ⟨hal-02747010⟩
  • Cécile Fleury, Marie Francoise Gautier, Jean-François Dufayard, Franck Molina, Manuel Ruiz, et al.. Structure-based classification of the plant non-specific lipid transfer protein superfamily towards its functional characterization. ECCB 2011, Jul 2011, Vienna, Austria. ⟨hal-02745958⟩
  • Cécile Fleury, Marie Francoise Gautier, Franck Molina, Manuel Ruiz, Frederic de Lamotte Guéry. Structure-based classification of the plant non-specific lipid transfer protein superfamily towards its functional characterization. JOBIM 2011, Jun 2011, Paris, France. ⟨hal-02748623⟩
  • Cécile Fleury, Marie Francoise Gautier, Jean-François Dufayard, Franck Molina, Manuel Ruiz, et al.. Structure-based classification of the plant non-specific lipid transfer protein superfamily towards its functional characterization. ISMB 2011, Jul 2011, Vienna, Austria. ⟨hal-02746029⟩
  • Cécile Fleury, Marie Francoise Gautier, Pierre Larmande, Sabine Pérès, Frederic de Lamotte Guéry, et al.. Towards a multi-scale and formalized representation of protein sequence-structure-function relationships : the nsLTP family as a case of study. JOBIM2010, Sep 2010, Montpellier, France. ⟨hal-02753839⟩
  • Cécile Fleury, Marie Francoise Gautier, Pierre Larmande, Sabine Pérès, Frederic de Lamotte Guéry, et al.. Towards a multi-scale and formalized representation of protein sequence-structure-function relationships : the nsLTP family as a case of study. Séminaire Génomique Végétale, Mar 2010, Pont-Royal en Provence, France. ⟨hal-02752562⟩
  • Cécile Fleury, Marie Francoise Gautier, Pierre Larmande, Sabine Pérès, Frederic de Lamotte Guéry, et al.. Towards a multi-scale and formalized representation of protein sequence-structure-function relationships : the nsLTP family as a case of study. 18. Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Jul 2010, Boston, United States. ⟨hal-02753301⟩
  • Valérie Pujade-Renaud, Y. Bourre, Frederic de Lamotte Guéry, Joël Poncet, Daniel Bieysse. Comparative analysis of cassiicolin structure and production in four strains of Corynespora cassiicola. International Natural Rubber Conference and Annual Meetings IRRDB, Oct 2008, Kuala Lumpur, Malaysia. n.p. ⟨hal-01189588⟩
  • Frederic de Lamotte Guéry. 11. International Symposium on BioChromatography and Nanoseparation preface. 11. International Symposium on BioChromatography and Nanoseparation preface, Oct 2008, Montpellier, France. ⟨hal-02820189⟩
  • Valérie Pujade-Renaud, Frederic de Lamotte Guéry, Philippe Barthe, Christian Roumestand. Fungal phytotoxins; story-case of cassiicolin, a new proteinaceous host-selective toxin from Corynespora cassiicola. Brazilian Phytopathological Society Meeting, Aug 2007, Paranà, Brazil. n.p. ⟨hal-01189575⟩
  • Philippe Barthe, Valérie Pujade-Renaud, Marie-Pierre Duviau, Frederic de Lamotte Guéry, Christian Roumestand. Détermination structurale de la cassiicoline, la toxine glycosylée de Corynespora cassiicola. Congrès du GERM (Groupe d’Étude de Résonance Magnétique), Mar 2007, Alénya, France. n.p. ⟨hal-01189598⟩
  • M.F. Gautier, Valerie Lullien Pellerin, W. Dieryck, Frédéric de Lamotte, T. Ihorai, et al.. Molecular studies of cysteine-rich proteins from wheat. International Meeting, Sep 1994, Viterbo, Italy. ⟨hal-02773738⟩

Poster communications2 documents

  • Floréal Cabanettes, Marc Chakiachvili, Vincent Lefort, Jean-François Dufayard, Frederic de Lamotte Guéry, et al.. CompPhy v2 : une plate-forme collaborative pour visualiser et comparer des phylogénies. JOBIM: Journées ouvertes de biologie informatique et mathématiques, Jun 2016, Lyon, France. 437 p., 2016, JOBIM 2016. ⟨hal-01594479⟩
  • A. Armero, Franc-Christophe Baurens, Stephanie Bocs, A. Breil, Frederic de Lamotte Guéry, et al.. South Green bioinformatics platform: Update 2015. 3. Plant Genomics Congress, May 2015, Londres, United Kingdom. Global Engage, 2015, Plant Genomics Congress. ⟨hal-02739966⟩

Books1 document

  • Philippe Joudrier, Valerie Lullien Pellerin, Frédéric de Lamotte, Remi Alary, M. Labhilili, et al.. Molecular studies of genes involved in quality and drought tolerance: development of probes. 8 p., 1998. ⟨hal-02842467⟩

Book sections1 document

  • Christian Kohler, Raphaël Recht, Marc Quinternet, Frédéric de Lamotte, Marc-André Delsuc, et al.. Accurate protein-peptide titration experiments by nuclear magnetic resonance using low-volume samples. Affinity Chromatography : Methods and Protocols, 1286, Humana Press, 341 p., 2015, Methods in Molecular Biology, 978-1-4939-2447-9. ⟨10.1007/978-1-4939-2447-9_22⟩. ⟨hal-02801062⟩

Other publications1 document

  • Laurent Bruckler, Ange Balboa, Frederic de Lamotte Guéry, Gabrielle Daudin, Jean Paul Mazauric, et al.. Plan d'action Assurance Qualité du centre de Montpellier "Juillet 2013 - juillet 2015". 2013. ⟨hal-01606211⟩

Habilitation à diriger des recherches1 document

  • Frédéric de Lamotte. Étude des relations structure - fonction des protéines végétales. Biochimie [q-bio.BM]. Université Montpellier II - Sciences et Techniques du Languedoc, 2006. ⟨tel-00375496⟩