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Chromatin folding : from linear chromosomes to the 4D nucleus

 T. Cheutin , Frederic Bantignies , B. Leblanc , Giacomo Cavalli
Cold Spring Harbor Symposia on Quantitative Biology, 2011, 75, pp.461-473. ⟨10.1101/sqb.2010.75.029⟩
Article dans une revue hal-00615521v1
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Principles of genome folding into topologically associating domains

 Quentin Szabo , Frederic Bantignies , Giacomo Cavalli
Science Advances , 2019, 5 (4), pp.eaaw1668. ⟨10.1126/sciadv.aaw1668⟩
Article dans une revue hal-02990881v1
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Higher-Order Chromosomal Structures Mediate Genome Function

 Ivana Jerković , Quentin Szabo , Frédéric Bantignies , Giacomo Cavalli
Journal of Molecular Biology, 2020, 432 (3), pp.676-681. ⟨10.1016/j.jmb.2019.10.014⟩
Article dans une revue hal-02990848v1

The C-terminus of the HTLV-1 Tax oncoprotein mediates interaction with the PDZ domain of cellular proteins

 Raphaël Rousset , Stéphane Fabre , Christelle Desbois , Frederic Bantignies , Pierre Jalinot
Oncogene, 1998, 16 (5), pp.643-654. ⟨10.1038/sj.onc.1201567⟩
Article dans une revue hal-03137455v1

Polycomb group-dependent Cyclin A repression in Drosophila.

 Am Martinez , S. Colomb , S. Dejardin , Frederic Bantignies , Giacomo Cavalli
Genes and Development, 2006, 20, pp.501-513. ⟨10.1101/gad.357106⟩
Article dans une revue hal-00069818v1

Topological organization of Drosophila hox genes using DNA fluorescent in situ hybridization

 Frederic Bantignies , Giacomo Cavalli
Methods in Molecular Biology, 2014, 1196, pp.130-120. ⟨10.1007/978-1-4939-1242-1_7⟩
Article dans une revue hal-01059176v1
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Regulation of single-cell genome organization into TADs and chromatin nanodomains

 Quentin Szabo , Axelle Donjon , Ivana Jerković , Giorgio Papadopoulos , Thierry Cheutin , et al.
Nature Genetics, 2020, 52 (11), pp.1151-1157. ⟨10.1038/s41588-020-00716-8⟩
Article dans une revue hal-02991051v2
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Single-cell absolute contact probability detection reveals chromosomes are organized by multiple low-frequency yet specific interactions

 Diego Cattoni , Andrés M Cardozo Gizzi , Mariya Georgieva , Marco Di Stefano , Alessandro Valeri , et al.
Nature Communications, 2017, 8 (1), pp.1753. ⟨10.1038/s41467-017-01962-x⟩
Article dans une revue hal-01652403v1
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Stable Polycomb-dependent transgenerational inheritance of chromatin states in Drosophila

 Filippo Ciabrelli , Federico Comoglio , Simon Fellous , Boyan Bonev , Maria Ninova , et al.
Nature Genetics, 2017, 49 (6), pp.876-886. ⟨10.1038/ng.3848⟩
Article dans une revue hal-01529240v1
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A shared ancient enhancer element differentially regulates the bric-a-brac tandem gene duplicates in the developing Drosophila leg

 Henri-Marc Bourbon , Mikhail Benetah , Emmanuelle Guillou , Luis Humberto Mojica-Vazquez , Aissette Baanannou , et al.
PLoS Genetics, 2022, 18 (3), pp.e1010083. ⟨10.1371/journal.pgen.1010083⟩
Article dans une revue hal-03761668v1

Genomic interactions: Chromatin loops and gene meeting points in transcriptional regulation.

 T. Sexton , Frederic Bantignies , Giacomo Cavalli
Seminars in Cell and Developmental Biology, 2009, 20 (7), pp.849-855. ⟨10.1016/j.semcdb.2009.06.004⟩
Article dans une revue istex hal-00430769v1

Three-dimensional genome organization: a lesson from the Polycomb-Group proteins

 Frederic Bantignies
Biologie Aujourd'hui, 2013, 207 (1), pp.19-31. ⟨10.1051/jbio/2013002⟩
Article dans une revue hal-00881529v1
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Multiplexed chromatin imaging reveals predominantly pairwise long-range coordination between Drosophila Polycomb genes

 Julian Gurgo , Jean-Charles Walter , Jean-Bernard Fiche , Christophe Houbron , Marie Schaeffer , et al.
2022
Pré-publication, Document de travail hal-03707233v1
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Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes

 Alessa R Ringel , Quentin Szabo , Andrea M Chiariello , Konrad Chudzik , Robert Schöpflin , et al.
Cell, 2022, 185 (20), pp.3689-3704.e21. ⟨10.1016/j.cell.2022.09.006⟩
Article dans une revue hal-03795681v1

Cellular memory and dynamic regulation of polycomb group proteins

 Frederic Bantignies , Giacomo Cavalli
Current Opinion in Cell Biology, 2006, 18, pp.275-283. ⟨10.1016/j.ceb.2006.04.003⟩
Article dans une revue istex hal-00069807v1

Chromosome Conformation Capture on Chip (4C): Data Processing

 B Leblanc , I Comet , Frederic Bantignies , Giacomo Cavalli
Methods in Molecular Biology, 2016, 1480, pp.243-261. ⟨10.1007/978-1-4939-6380-5_21⟩
Article dans une revue hal-01377541v1
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4D Genome Rewiring during Oncogene-Induced and Replicative Senescence

 Satish Sati , Boyan Bonev , Quentin Szabo , Daniel Jost , Paul Bensadoun , et al.
Molecular Cell, 2020, 78 (3), pp.522-538.e9. ⟨10.1016/j.molcel.2020.03.007⟩
Article dans une revue hal-02990970v1

Polycomb-dependent Regulatory Contacts between Distant Hox Loci in Drosophila

 Frederic Bantignies , Virginie Roure , Itys Comet , Benjamin Leblanc , Bernd Schuettengruber , et al.
Cell, 2011, 144 (2), pp.214-226. ⟨10.1016/j.cell.2010.12.026⟩
Article dans une revue hal-00575083v1
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TADs are 3D structural units of higher-order chromosome organization in Drosophila

 Quentin Szabo , Daniel Jost , Jia-Ming Chang , Diego Cattoni , Giorgio Papadopoulos , et al.
Science Advances , 2018, 4 (2), pp.eaar8082. ⟨10.1126/sciadv.aar8082⟩
Article dans une revue hal-01726709v1
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Higher-Order Chromatin Organization Using 3D DNA Fluorescent In Situ Hybridization

 Quentin Szabo , Giacomo Cavalli , Frederic Bantignies
Beatrice Bodega; Chiara Lanzuolo. Capturing Chromosome Conformation - Methods and Protocols, 2157, Humana New York, pp.221-237, 2021, Methods in Molecular Biology, 978-1-0716-0664-3. ⟨10.1007/978-1-0716-0664-3_13⟩
Chapitre d'ouvrage hal-02991010v1
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Interchromosomal contacts between regulatory regions trigger stable transgenerational epigenetic inheritance in Drosophila

 Maximilian Fitz-James , Gonzalo Sabarís , Peter Sarkies , Frédéric Bantignies , Giacomo Cavalli
2023
Pré-publication, Document de travail hal-04252150v1

Polycomb group proteins: repression in 3D

 Frederic Bantignies , Giacomo Cavalli
Trends in Genetics, 2011, 27 (11), pp.454-464. ⟨10.1016/j.tig.2011.06.008⟩
Article dans une revue istex hal-00635925v1
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