FB
Frédéric Boudon
109
Documents
Présentation
Researcher in Plant Modelling and Computer Science
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> 
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> ### Position
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> #####
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> [CIRAD](https://www.cirad.fr) researcher, Phenomen team, [UMR AGAP](https://umr-agap.cirad.fr).
> Associated Researcher INRIA, [Mosaic Team](https://team.inria.fr/mosaic/fr/). > ### Areas of interest
> >
> > - Geometrical modelling of plant structures (Turtle geometry, Scene graph, Combinatorial map)
> > - Rewriting systems, L-systems
> > - Multi-scale structures and algorithms
> > - Fractal geometry applied to plants
> > - Reconstruction methods from laser data, images and video.
> > - Functional Structural Plant Models (FSPMs)
> >
> > ### Softwares
> >
> > - L-Py: an L-system framework in Python
> > - PlantGL: a Python based software for 3D plant modelling
> > - PlantScan3D: an open-source editor for reconstructing 3D plant architecture from laser scans.
> > - OpenALEA: a scalable, modular and open software platform for plant modeling and simulation
Publications
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Representation and functions of shoot apical meristems in FSPMsFSPM2023, Mar 2023, Berlin, Germany
Communication dans un congrès
hal-04098500v1
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MaCS4Plants: A Mathematic & Computer Science Network for FSPMFSPM 2023, Mar 2023, Berlin (DE), Germany
Communication dans un congrès
hal-04399157v1
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Analysing the architecture of Corylus avellana and parametrizing L-HAZELNUT FSPMFSPM 2023 - 10th International Conference on Functional-Structural Plant Models, Dr. Susann Müller, Mar 2023, Berlin, Germany. pp.1-2
Communication dans un congrès
hal-04142608v1
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Architecture and yield relationship in hazelnut treeXXXI International Horticultural Congress (IHC2022): International Symposium on Innovative Perennial Crops Management, Aug 2022, Angers, France. pp.331-336, ⟨10.17660/ActaHortic.2023.1366.40⟩
Communication dans un congrès
hal-04137945v2
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3D Plant Phenotyping: All You Need is Labelled Point Cloud DataCVPPP-ECCV 2020 - Workshop on Computer Vision Problems in Plant Phenotyping, Aug 2020, Glasgow, United Kingdom. pp.1-17
Communication dans un congrès
hal-03030004v1
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Toward a functional-structural model of oil palm accounting for architectural plasticity in response to planting density.FSPM 2020 : Towards Computable Plants. 9th International Conference on Functional-Structural Plant models, Oct 2020, Hanovre, Germany
Communication dans un congrès
hal-03053584v1
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Genome-wide association study based on highthroughput phenotyping reveals genomic regions invovlved in the control of architectural and physiological traits in Apple tree10th ROSACEAE GENOMICS CONFERENCE RGC10 (virtual), Centre for Research in Agriculture Genomics (CRAG), Dec 2020, Barcelona, Spain. pp.Abstract C0195
Communication dans un congrès
hal-03086941v1
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Modelling of the mango tree -blossom gall midge system: in silico assessment of its functioning.The Second International Crop Modelling Symposium, Feb 2020, Montpellier, France
Communication dans un congrès
hal-04161752v1
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Toward Virtual Modelling Environments using Notebooks for Phenotyping and Simulation of Plant DevelopmentFSPM 2020 - 9th International Conference on Functional-Structural Plant Models, Hochschule Geisenheim University; University of Hannover, Oct 2020, Hanovre / Virtua, Germany. pp.99-100
Communication dans un congrès
hal-03059535v1
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The mango tree – blossom gall midge system: in-silico assessment of its functioning and managementBiennial conference of the international society for ecological modelling (ISEM)., Oct 2019, Salzburg, Austria
Communication dans un congrès
hal-04154493v1
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Modeling branching under different light intensity regimes: integrating the role of hormones and sugars.International symposium on advanced technologies and management for innovative greenhouses (GreenSys), Jun 2019, Angers, France
Communication dans un congrès
hal-02950625v1
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Assessing the role of ageing and light availability in leaf mortality in the mango treeXXX International Horticultural Congress IHC2018: International Symposium on Cultivars, Rootstocks and Management Systems of Deciduous Fruit and Fruit Tree Behaviour in Dynamic Environments, International Society for Horticultural Science, Aug 2018, Istanbul, Turkey. pp.601-608, ⟨10.17660/ActaHortic.2020.1281.79⟩
Communication dans un congrès
hal-02911777v1
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Assessing T-LiDAR technology for high throughput phenotyping apple tree topological and architectural traits.30. International Horticultural Congress IHC2018, Aug 2018, Istanbul, Turkey
Communication dans un congrès
hal-02738414v1
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Multi-scale high-throughput phenotyping of an apple tree core collection under water stress condition30. International Horticultural Congress IHC2018, Aug 2018, Istanbul, Turkey
Communication dans un congrès
hal-02738372v1
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T-Lidar as a new high-throughput methodology for studying the genetic determinisms of apple tree architecture9. International Rosaceae Genomics Conference, Jun 2018, Nanjing, China
Communication dans un congrès
hal-02736858v1
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Using T-Lidar scans for high-throughput phenotyping of genotypic variability of apple tree architecture6. International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications - PMA2018, Nov 2018, Hefei, China
Communication dans un congrès
hal-02737993v1
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Toward the inter-comparison of radiation transfert model for plant modelling applicationFSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, FSPMA 2016., Nov 2016, Qingdao, China
Communication dans un congrès
hal-01543439v1
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Sucrose interacts with auxin in the burst of axillary buds11e colloque National de la Société Française de Biologie Végétale, Jul 2016, Angers, France
Communication dans un congrès
hal-01400014v1
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Reducing algorithm complexity in treesFSPMA 2016 - IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, Nov 2016, Qingdao, China
Communication dans un congrès
hal-01398289v1
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Toward a mechanical model of 3D fruit developmentInternational Symposium on Modelling in Fruit Research and Orchard Management, Jun 2015, Montpellier, France. 1 p
Communication dans un congrès
hal-01237387v1
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Exploring root development and architecture in one of the most heat and drought tolerant cereals, pearl milletPlant Phenotyping Symposium, Nov 2015, Barcelone, Spain
Communication dans un congrès
hal-01237385v1
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The Role of Structural and Temporal Factors in the Architectural Development of the Mango Tree: Evidences from SimulationInternational Symposium on Modelling in Fruit Research and Orchard Management, Jun 2015, Montpellier, France
Communication dans un congrès
hal-01237402v1
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A crop simulation model to predict fruit yield and quality on mango tree: overview, progresses and perspectivesInternational Mango Symposium, Sep 2015, Darwin, Australia
Communication dans un congrès
hal-01237410v1
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Quantitative assessment of automatic reconstructions of branching systems7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.64-66
Communication dans un congrès
hal-00850796v1
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OpenAlea 2.0: Architecture of an integrated modeling environment on the web7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.213
Communication dans un congrès
hal-00850931v1
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Integrating architecture and physiological perspectives in fruit development7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.127-130
Communication dans un congrès
hal-00850801v1
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An automated image-processing pipeline for high-throughput analysis of root architecture in OpenAlea7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.85-87
Communication dans un congrès
hal-00850814v1
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Optimal 3D reconstruction of plants canopy from terrestrial laser scanner data by fusion of the 3D point information and the intensity value7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.58-60
Communication dans un congrès
hal-00850793v1
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Investigating the Influence of Geometrical Traits on Light Interception Efficiency of Apple Trees: a Modelling Study with MAppleTInternational Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Oct 2012, Shangai, China. pp.152-159
Communication dans un congrès
hal-00790650v1
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TreeSketch: Interactive Procedural Modeling of Trees on a TabletEUROGRAPHICS Symposium on Sketch-Based Interfaces and Modeling, 2012, Cagliari, Italy
Communication dans un congrès
hal-00828850v1
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Characterization of whole plant leaf area properties using laser scanner point cloudsFourth International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, 2012, Shanghai, China
Communication dans un congrès
hal-00828841v1
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Characterization of whole plant leaf area properties using laser scanner point clouds4. International Symposium on Plant growth Modeling, Simulation, Visualization and Applications, Oct 2012, Shangai, China. 472 p
Communication dans un congrès
hal-01190460v1
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Generating 3D volumetric meshes of internal and external fruit structureHortiModel2012 -- Models for Plant Growth, Environmental Control and Farm Management in Protected Cultivation. Acta Horticulturae., 2012, Nanjing, China
Communication dans un congrès
hal-00828843v1
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Realistic Plant Modeling from Images Based on Analysis-by-Synthesis8th International Conference on Mathematical Methods for Curves and Surfaces (MMCS 2012), Jun 2012, Oslo, Norway. pp.213-229, ⟨10.1007/978-3-642-54382-1_12⟩
Communication dans un congrès
hal-01148822v2
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Reconstruction de modèles virtuels de vignes à partir d'imagesORASIS - Congrès des jeunes chercheurs en vision par ordinateur, INRIA Grenoble Rhône-Alpes, Jun 2011, Praz-sur-Arly, France
Communication dans un congrès
inria-00595483v1
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Sensitivity Analysis of Light Interception to Geometrical Traits of Apple Trees: an in silico Study based on MAppleT model9th International Symposium on Modelling in Fruit Research and Orchard Management, 2011, Saint-Jean-sur-Richelieu, Canada
Communication dans un congrès
hal-00828858v1
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L-Py: L-Systems in PythonEuroSciPy 2011, 2011, Paris, France
Communication dans un congrès
hal-00828857v1
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Sensitivity analysis of light interception to geometrical traits of Apple trees: an in silico study based on MAppleT Model9. International Symposium on modelling in Fruit Research and Orchard management, International Society for Horticultural Science (ISHS). Louvain, INT., Jun 2011, Saint-Jean-Sur-Richelieu, Canada
Communication dans un congrès
hal-01269213v1
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Building modular FSPM under OpenAlea: concepts and applications6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.109-112
Communication dans un congrès
hal-01192232v2
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L-Py, an open L-systems framework in Python6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.116-119
Communication dans un congrès
hal-00831780v1
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Lossy compression of tree architectures6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.12-15
Communication dans un congrès
hal-00831783v1
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Modélisation de vignes à partir d'une séquence d'images23èmes journées de l'Association Francophone d'Informatique Graphique, 2010, Dijon, France
Communication dans un congrès
hal-00831787v1
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Reconstructing Plant Architecture from 3D Laser scanner data6th International Workshop on Functional-Structural Plant Models, Sep 2010, Davis, United States. pp.12--17
Communication dans un congrès
hal-00490064v1
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Lossy compression of plant architectures6th International Workshop on Functional-Structural Plant Models, Sep 2010, Davis, United States. pp.10--13
Communication dans un congrès
hal-00490061v1
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Efficient and robust reconstruction of botanical branching structure from laser scanned pointsCAD/Graphics 2009, Aug 2009, Yellow Mountain City, China. pp.572-575
Communication dans un congrès
inria-00436480v1
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Sharing efforts for modelling plant systems: from publications to reusable software componentsComparative Biochemistry and Physiology - Part A: Molecular& Integrative Physiology, 2009, Glasgow, United Kingdom. pp.S222, ⟨10.1016/j.cbpa.2009.04.549⟩
Communication dans un congrès
hal-00831802v1
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A Demonstration of MobiTree: Progressive 3D Tree Models Streaming on Mobile ClientsACM Multimedia 2009, 2009, Beijing, China. pp.955-956, ⟨10.1145/1631272.1631465⟩
Communication dans un congrès
hal-00831796v1
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Streaming of Plants in Distributed Virtual EnvironmentsACM Multimedia 2008 - Systems and Networking Track, 2008, Vancouver, BC, Canada. pp.1-10, ⟨10.1145/1459359.1459361⟩
Communication dans un congrès
hal-00831813v1
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OpenAlea: a visual programming and component-based software platform for plant modelling5th International Workshop on Functional Structural Plant Models, Nov 2007, Napier, New Zealand. pp.751-760, ⟨10.1071/fp08084⟩
Communication dans un congrès
hal-02757859v1
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Modeling of light transmission under heterogeneous forest canopy: model description and validation5th International Workshop on Functional-Structural Plant Models, 2007, Napier, New Zealand. pp.58, 1--4
Communication dans un congrès
hal-00831822v1
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Compression progressive de modèles de plantes à base de cylindres généralisés20eme journées de l'Association Francophone d'Informatique Graphique, 2007, Marne-la-Vallée, France. pp.197-204
Communication dans un congrès
hal-00831815v1
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OpenAlea: An open-source platform for the integration of heterogeneous FSPM componentsFSPM07 - 5th International Workshop on Functional-Structural Plant Models, Nov 2007, Napier, New Zealand. pp.P36:1-2
Communication dans un congrès
hal-00831824v1
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The architecture of OpenAlea: A visual programming and component based software for plant modeling5th International Workshop on Functional-Structural Plant Models, 2007, Napier, New Zealand. pp.25, 1--4
Communication dans un congrès
hal-00831829v1
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OpenAlea : a platform for plant modelling, analysis and simulationPython Conference Europython, 2006, Genève, Switzerland. 16 p
Communication dans un congrès
hal-01189325v1
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Modelling directional anisotropy of thermal infrared measurements over a Pine forest canopy2. International Symposium on Recent Advances in Quantitative Remote Sensing (RAQRS'II), Sep 2006, Torrent, Spain
Communication dans un congrès
hal-02754084v1
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A Critical Appraisal of the Box Counting Method to Assess the Fractal Dimension of Tree CrownsSecond International Symposium, ISVC 2006, 2006, France. pp.751-760
Communication dans un congrès
hal-00120795v1
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Space occupation by tree crowns obeys fractals laws: evidence from 3D digitized plants4th International Workshop on Functional-Structural Plant Models, 2004, Montpellier, France. pp.79-83
Communication dans un congrès
hal-00830081v1
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Space occupation by tree crowns obeys fractals: evidence from 3D digitized plants4. International Workshop on functional-structural plant models, Jun 2004, Montpellier, France
Communication dans un congrès
hal-01190896v1
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ALEA: A software for integrating analysis and simulation tools for 3D architecture and ecophysiology4. International Workshop on Functional-Structural plant model, Jun 2004, Montpellier, France
Communication dans un congrès
hal-01189240v1
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Tackling the 3D root system architecture of grapevines: a new phenotyping pipeline based on photogrammetry2. International Congress on Grapevine and Wine Sciences (2ICGWS), Nov 2023, Logrono, Spain
Poster de conférence
hal-04281662v1
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Genetic analysis of the morphological and ecophysiological responses to water deficit in an apple tree core-collection through a combination of high-throughput and physiological approaches5. AgreenSkills Annual Meeting, Jun 2018, Edinbourg, United Kingdom. 2018
Poster de conférence
hal-02791152v1
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Assessment of the role of ageing and light availability in leaf mortality in mango treeThe 30th International Horticultural Congress, Aug 2018, Istanbul, Turkey. International Society for Horticultural Science (ISHS), 2018, IHC2018
Poster de conférence
hal-01878284v1
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Linking vegetative growth,reproduction and irregular bearing in the mango treeInternational Symposium on Flowering, Fruit set and Alternate Bearing, Jun 2017, Palermo, Italy. University of Palermo, Sicile, p.90, 1diaporama (17vues), 2017, Book of abstracts
Poster de conférence
hal-01606235v1
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Toward the inter-comparison of radiation transfert model for plant modelling applicationIEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, QingDao, China.
Poster de conférence
hal-01400026v1
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Exploring carbon allocation with a multi-scale model: the case of appleInternational Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, Qingdao, China. 2016
Poster de conférence
hal-01602913v1
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An FSPM approach for modeling fruit yield and quality in mango treesIEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, Qingdao, China.
Poster de conférence
hal-01400016v1
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Estimating canopy characteristics from ground-based LiDAR measurement assisted with 3D Adel-Wheat modelFSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, Nov 2016, Qingdao, China. 2016
Poster de conférence
hal-01400001v1
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Modelling physiological regulation of bud burst by sucrose and auxinIEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, QingDao, China.
Poster de conférence
hal-01400025v1
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Modelling fruit yield and quality on the Mango tree: Recent progresses and future stepsInternational Symposium on Modelling in Fruit Research and Orchard Management, Jun 2015, Montpellier, France. , 2015
Poster de conférence
hal-01193184v1
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The role of structural and temporal factors in the architectural development of the mango Tree: evidences from simulationX International Symposium on Modelling in Fruit Research and Orchard Management, Jun 2015, Montpellier, France. International Society for Horticultural Science, Acta Horticulturae, 1160, 430 p., 2017, X International Symposium on Modelling in Fruit Research and Orchard Management. ⟨10.17660/ActaHortic.2017.1160.12⟩
Poster de conférence
hal-01605996v1
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OpenAlea 2.0: Architecture of an integrated modeling environment on the web7. International Conference on Functional Structure Plant Models, Jun 2013, Saariselkä, Finland. Finnish Society of Forest Science, 2013
Poster de conférence
hal-01578851v1
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Reconstructing Plants in 3D from a Single Image Using Analysis-by-SynthesisBebis; George and Boyle; Victor and Klosowski; James and Coquillart; Sabine and Luo; Xun and Chen; Min and Gotz; David; Richard and Parvin; Bahram and Koracin; Darko and Li; Baoxin and Porikli; Fatih and Zordan. Advances in Visual Computing, 8033, Springer Berlin Heidelberg, pp.322--332, 2013, Lecture Notes in Computer Science, 978-3-642-41913-3. ⟨10.1007/978-3-642-41914-0_32⟩
Chapitre d'ouvrage
hal-00931231v1
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A critical appraisal of the box counting method to assess the fractal dimension of tree crownsISVC 2006, 2006
Chapitre d'ouvrage
hal-01189202v1
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Riemannian L-systems: Modeling growing forms in curved spaces2024
Pré-publication, Document de travail
hal-04535182v1
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PlantGL : a Python-based geometric library for 3D plant modelling at different scales[Research Report] RR-6367, INRIA. 2007
Rapport
inria-00191126v3
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Survey on Computer Representations of Trees for Realistic and Efficient Rendering[Research Report] 2301, LIRIS UMR CNRS 5205. 2006
Rapport
hal-00830069v1
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GEOM Module manual: I User guide[Technical Report] 2001
Rapport
hal-00827471v1
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GEOM Module manual: II Developer guide[Technical Report] 2001
Rapport
hal-00827472v1
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Représentation géométrique multi-échelles de l'architecture des plantesModélisation et simulation. Université Montpellier II - Sciences et Techniques du Languedoc, 2004. Français. ⟨NNT : ⟩
Thèse
tel-00552120v1
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OpenAlea2019
Logiciel
hal-02100181v1
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