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Number of documents

100

Frédéric Boudon


Researcher in Plant Modelling and Computer Science

Frédéric Boudon 

Position

 
CIRAD researcher, Phenomen team, UMR AGAP.
Associated Researcher INRIA, Mosaic Team.

Areas of interest

  • Geometrical modelling of plant structures (Turtle geometry, Scene graph, Combinatorial map)
  • Rewriting systems, L-systems
  • Multi-scale structures and algorithms
  • Fractal geometry applied to plants
  • Reconstruction methods from laser data, images and video.
  • Functional Structural Plant Models (FSPMs)

Softwares

  • L-Py: an L-system framework in Python
  • PlantGL: a Python based software for 3D plant modelling
  • PlantScan3D: an open-source editor for reconstructing 3D plant architecture from laser scans.
  • OpenALEA: a scalable, modular and open software platform for plant modeling and simulation


Journal articles24 documents

  • Frédéric Boudon, Séverine Persello, Alexandra Jestin, Anne-Sarah Briand, Isabelle Grechi, et al.. V-Mango: a functional-structural model of mango tree growth, development and fruit production. Annals of Botany, Oxford University Press (OUP), 2020, 126, pp.745 - 763. ⟨10.1093/aob/mcaa089⟩. ⟨hal-02942876⟩
  • Aude Coupel-Ledru, Benoit Pallas, Magalie Delalande, Frédéric Boudon, Emma Carrié, et al.. Multi-scale high-throughput phenotyping of apple architectural and functional traits in orchard reveals genotypic variability under contrasted watering regimes. Horticulture research, Nature Publishing Group, 2019, 6 (1), pp.52. ⟨10.1038/s41438-019-0137-3⟩. ⟨hal-02317154⟩
  • Jessica Bertheloot, Francois Barbier, Fréderic Boudon, Maria Dolores Perez-Garcia, Thomas Peron, et al.. Sugar availability suppresses the auxin-induced strigolactone pathway to promote bud outgrowth. New Phytologist, Wiley, 2019, 225 (2), pp.866-879. ⟨10.1111/nph.16201⟩. ⟨hal-02402977⟩
  • Anne Schneider, Christophe Godin, Frédéric Boudon, Sabine Demotes-Mainard, Soulaiman Sakr, et al.. Light Regulation of Axillary Bud Outgrowth Along Plant Axes: An Overview of the Roles of Sugars and Hormones. Frontiers in Plant Science, Frontiers, 2019, 10, pp.1-17. ⟨10.3389/fpls.2019.01296⟩. ⟨hal-02327576⟩
  • Shouyang Liu, Frédéric Baret, Mariem Abichou, Frédéric Boudon, Samuel Thomas, et al.. Estimating wheat green area index from ground-based LiDAR measurement using a 3D canopy structure model. Agricultural and Forest Meteorology, Elsevier Masson, 2017, 247, pp.12 - 20. ⟨10.1016/j.agrformet.2017.07.007⟩. ⟨hal-01573077⟩
  • Mikolaj Cieslak, Ibrahim Cheddadi, Frédéric Boudon, Valentina Baldazzi, Michel Génard, et al.. Integrating Physiology and Architecture in Models of Fruit Expansion. Frontiers in Plant Science, Frontiers, 2016, 7, pp.19. ⟨10.3389/fpls.2016.01739⟩. ⟨hal-01400062⟩
  • Frédéric Boudon, Jérôme Chopard, Olivier Ali, Benjamin Gilles, Olivier Hamant, et al.. A Computational Framework for 3D Mechanical Modeling of Plant Morphogenesis with Cellular Resolution. PLoS Computational Biology, Public Library of Science, 2015, 11 (1), pp.1-16. ⟨10.1371/journal.pcbi.1003950⟩. ⟨hal-01142486⟩
  • Frédéric Boudon, Chakkrit Preuksakarn, Pascal Ferraro, Julien Diener, Philippe Nacry, et al.. Quantitative assessment of automatic reconstructions of branching systems obtained from laser scanning.. Annals of Botany, Oxford University Press (OUP), 2014, 114 (4), epub ahead of print. ⟨10.1093/aob/mcu062⟩. ⟨hal-01064917⟩
  • Massimiliano Sassi, Olivier Ali, Frédéric Boudon, Gladys Cloarec, Ursula Abad, et al.. An Auxin-Mediated Shift toward Growth Isotropy Promotes Organ Formation at the Shoot Meristem in Arabidopsis. Current Biology - CB, Elsevier, 2014, 24 (19), pp.2335-2342. ⟨10.1016/j.cub.2014.08.036⟩. ⟨hal-01074821⟩
  • Clémence Hatt, François Mankessi, Jean-Baptiste Durand, Frédéric Boudon, Fabienne Montes, et al.. Characteristics of Acacia mangium shoot apical meristems in natural and in vitro conditions in relation to heteroblasty. Trees - Structure and Function, Springer Verlag, 2012, 26 (3), pp.1031-1044. ⟨10.1007/s00468-012-0680-0⟩. ⟨hal-00699815⟩
  • Frédéric Boudon, Christophe Pradal, Thomas Cokelaer, Przemyslaw Prusinkiewicz, Christophe Godin. L-Py: an L-system simulation framework for modeling plant architecture development based on a dynamic language. Frontiers in Plant Science, Frontiers, 2012, 3 (76), doi: 10.3389/fpls.2012.00076. ⟨10.3389/fpls.2012.00076⟩. ⟨cirad-00703085⟩
  • Cédric Gaucherel, Frédéric Boudon, Thomas Houet, Mathieu Castets, Christophe Godin. Understanding patchy landscape dynamics: Towards a landscape language. PLoS ONE, Public Library of Science, 2012, 7 (9), pp.16. ⟨10.1371/journal.pone.0046064⟩. ⟨halshs-00750971⟩
  • David da Silva, Philippe Balandier, Frédéric Boudon, André Marquier, Christophe Godin. Modeling of light transmission under heterogeneous forest canopy: an appraisal of the effect of the precision level of crown description. Annals of Forest Science, Springer Nature (since 2011)/EDP Science (until 2010), 2012, 69 (2), pp.181-193. ⟨10.1007/s13595-011-0139-2⟩. ⟨hal-00828845⟩
  • H. K. Mebatsion, Frédéric Boudon, Christophe Godin, Christophe Pradal, M. Genard, et al.. A novel profile based model for virtual representation of quasi-symmetric plant organs. Computers and Electronics in Agriculture, Elsevier, 2011, 75 (1), pp.113-124. ⟨10.1016/j.compag.2010.10.006⟩. ⟨hal-00657898⟩
  • François Mankessi, Aubin-R. Saya, Frédéric Boudon, Yann Guédon, Fabienne Montes, et al.. Phase change-related variations of dome shape in Eucalyptus urophylla x Eucalyptus grandis shoot apical meristems. Trees - Structure and Function, Springer Verlag, 2010, 24 (4), pp.743-752. ⟨10.1007/s00468-010-0444-7⟩. ⟨hal-00831788⟩
  • Sébastien Mondet, Wei Cheng, Géraldine Morin, Romulus Grigoras, Frédéric Boudon, et al.. Compact and Progressive Plant Models for Streaming in Networked Virtual Environments. ACM Transactions on Multimedia Computing, Communications and Applications, Association for Computing Machinery, 2009, 5 (3), pp.1-22. ⟨10.1145/1556134.1556138⟩. ⟨hal-00831797⟩
  • Christophe Pradal, Frédéric Boudon, Christophe Nouguier, Jérôme Chopard, Christophe Godin. PlantGL: A Python-based geometric library for 3D plant modelling at different scales. Graphical Models, Elsevier, 2009, 71 (1), 1--21, posted-at = 2008-11-04 14:10:07. ⟨10.1016/j.gmod.2008.10.001⟩. ⟨hal-00850782⟩
  • Jamie Wither, Frédéric Boudon, Marie-Paule Cani, Christophe Godin. Structure from silhouettes: a new paradigm for fast sketch-based design of trees. Computer Graphics Forum, Wiley, 2009, 28 (2), pp.541-550. ⟨10.1111/j.1467-8659.2009.01394.x⟩. ⟨hal-00366289⟩
  • Christophe Pradal, Samuel Dufour-Kowalski, Frédéric Boudon, Christian Fournier, Christophe Godin. OpenAlea: A visual programming and component-based software platform for plant modeling. Functional Plant Biology, CSIRO Publishing, 2008, 35 (10), pp.751-760. ⟨10.1071/FP08084⟩. ⟨hal-00831811⟩
  • David da Silva, Frédéric Boudon, Christophe Godin, Hervé Sinoquet. Multiscale Framework for Modeling and Analyzing Light Interception by Trees. Multiscale Modeling and Simulation: A SIAM Interdisciplinary Journal, Society for Industrial and Applied Mathematics, 2008, 7 (2), pp.910-933. ⟨10.1137/08071394X⟩. ⟨hal-00831810⟩
  • Frédéric Boudon, Gilles Le Moguedec. Déformation asymétrique de houppiers pour la génération de représentations paysagères réalistes. Revue Electronique Francophone d'Informatique Graphique, Association Française d'Informatique Graphique, 2007, 1 (1), pp.9-29. ⟨hal-00831816⟩
  • Frédéric Boudon, Christophe Godin, Christophe Pradal, Olivier Puech, Hervé Sinoquet. Estimating the fractal dimension of plants using the two-surface method: An analysis based on 3D-digitized tree foliage. Fractals, World Scientific Publishing, 2006, 14 (3), pp.149-163. ⟨hal-01189287⟩
  • Frédéric Boudon, Christophe Godin, Christophe Pradal, Olivier Puech, Hervé Sinoquet. Estimating the fractal dimension of plants using the two-surface method: An analysis based on 3D-digitized tree foliage. Fractals, World Scientific Publishing, 2006, 14 (3), pp.149-163. ⟨10.1142/S0218348X06003179⟩. ⟨hal-00115450⟩
  • Frédéric Boudon, Premyslaw Prusinkiewicz, Pavol Federl, Christophe Godin, Radoslaw Karwowski. Interactive design of bonsai tree models. Computer Graphics Forum, Wiley, 2003, 22 (3), pp.591-599. ⟨10.1111/1467-8659.t01-2-00707⟩. ⟨hal-00827461⟩

Conference papers55 documents

  • Frédéric Boudon, Jan Vaillant, Christophe Pradal. Toward Virtual Modelling Environments using Notebooks for Phenotyping and Simulation of Plant Development. FSPM 2020 - 9th International Conference on Functional-Structural Plant Models, Hochschule Geisenheim University; University of Hannover, Oct 2020, Hanovre / Virtua, Germany. pp.99-100. ⟨hal-03059535⟩
  • Evelyne Costes, Aude Coupel-Ledru, Benoit Pallas, Magalie Delalande, Baptiste Guitton, et al.. Genome-wide association study based on highthroughput phenotyping reveals genomic regions invovlved in the control of architectural and physiological traits in Apple tree. 10th ROSACEAE GENOMICS CONFERENCE RGC10 (virtual), Centre for Research in Agriculture Genomics (CRAG), Dec 2020, Barcelona, Spain. pp.Abstract C0195. ⟨hal-03086941⟩
  • Raphael Perez, Rémi Vezy, Loïc Brancheriau, Frédéric Boudon, Doni Artanto Raharjo, et al.. Toward a functional-structural model of oil palm accounting for architectural plasticity in response to planting density.. FSPM 2020 : Towards Computable Plants. 9th International Conference on Functional-Structural Plant models, Oct 2020, Hanovre, Germany. ⟨hal-03053584⟩
  • Ayan Chaudhury, Frédéric Boudon, Christophe Godin. 3D Plant Phenotyping: All You Need is Labelled Point Cloud Data. CVPPP-ECCV 2020 - Workshop on Computer Vision Problems in Plant Phenotyping, Aug 2020, Glasgow, United Kingdom. pp.1-17. ⟨hal-03030004⟩
  • Anne Schneider, Frédéric Boudon, Sabine Demotes-Mainard, Lydie Ledroit, Maria Dolores Perez-Garcia, et al.. Modeling branching under different light intensity regimes: integrating the role of hormones and sugars.. International symposium on advanced technologies and management for innovative greenhouses (GreenSys), Jun 2019, Angers, France. ⟨hal-02950625⟩
  • Benoit Pallas, Magalie Delalande, Aude Coupel-Ledru, Frédéric Boudon, Jérome Ngao, et al.. Multi-scale high-throughput phenotyping of an apple tree core collection under water stress condition. 30. International Horticultural Congress IHC2018, Aug 2018, Istanbul, Turkey. ⟨hal-02738372⟩
  • Benoit Pallas, Sébastien Martinez, Olivier Simler, Emma Carrié, Evelyne Costes, et al.. Assessing T-LiDAR technology for high throughput phenotyping apple tree topological and architectural traits.. 30. International Horticultural Congress IHC2018, Aug 2018, Istanbul, Turkey. ⟨hal-02738414⟩
  • Benoit Pallas, Emma Carrié, Sébastien Martinez, Evelyne Costes, Frédéric Boudon. Using T-Lidar scans for high-throughput phenotyping of genotypic variability of apple tree architecture. 6. International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications - PMA2018, Nov 2018, Hefei, China. ⟨hal-02737993⟩
  • Benoit Pallas, Frédéric Boudon, Emma Carrié, Evelyne Costes. T-Lidar as a new high-throughput methodology for studying the genetic determinisms of apple tree architecture. 9. International Rosaceae Genomics Conference, Jun 2018, Nanjing, China. ⟨hal-02736858⟩
  • F. Boudon, S. Persello, I. Grechi, A. Marquier, C. Soria, et al.. Assessing the role of ageing and light availability in leaf mortality in the mango tree. XXX International Horticultural Congress IHC2018: International Symposium on Cultivars, Rootstocks and Management Systems of Deciduous Fruit and Fruit Tree Behaviour in Dynamic Environments, International Society for Horticultural Science, Aug 2018, Istanbul, Turkey. pp.601-608, ⟨10.17660/ActaHortic.2020.1281.79⟩. ⟨hal-02911777⟩
  • Jessica Bertheloot, Francois Barbier, Frédéric Boudon, Maria-Dolores Perez-Garcia, Thomas Péron, et al.. Sucrose interacts with auxin in the burst of axillary buds. 11e colloque National de la Société Française de Biologie Végétale, Jul 2016, Angers, France. ⟨hal-01400014⟩
  • Jessica Bertheloot, François Barbier, Frédéric Boudon, Maria Dolores Perez-Garcia, Thomas Péron, et al.. Sucrose interacts with auxin in the burst of axillary buds. 11e colloque National de la Société Française de Biologie Végétale, Jul 2016, Angers, France. ⟨hal-02740295⟩
  • Christophe Godin, Frédéric Boudon, Christophe Pradal. Reducing algorithm complexity in trees. FSPMA 2016 - IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, Nov 2016, Qingdao, China. ⟨hal-01398289⟩
  • Christian Fournier, Frédéric Boudon, Michaël Chelle, M. Saudreau, Jérome Ngao, et al.. Toward the inter-comparison of radiation transfert model for plant modelling application. FSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, FSPMA 2016., Nov 2016, Qingdao, China. ⟨hal-01543439⟩
  • Isabelle Grechi, Frédéric Boudon, Mathieu Léchaudel, Frédéric Normand. A crop simulation model to predict fruit yield and quality on mango tree: overview, progresses and perspectives. International Mango Symposium, Sep 2015, Darwin, Australia. ⟨hal-01237410⟩
  • Sixtine Passot, Fatoumata Gnacko, Jonathan Atkinson, Brian Atkinson, Mikael Lucas, et al.. Exploring root development and architecture in one of the most heat and drought tolerant cereals, pearl millet. Plant Phenotyping Symposium, Nov 2015, Barcelone, Spain. ⟨hal-01237385⟩
  • Frédéric Boudon, Alexandra Jestin, Anne-Sarah Briand, Pierre Fernique, Pierre-Eric Lauri, et al.. The Role of Structural and Temporal Factors in the Architectural Development of the Mango Tree: Evidences from Simulation. International Symposium on Modelling in Fruit Research and Orchard Management, Jun 2015, Montpellier, France. ⟨hal-01237402⟩
  • Ibrahim Cheddadi, Christophe Godin, Frédéric Boudon, Valentina Baldazzi, Michel Génard, et al.. Toward a mechanical model of 3D fruit development. International Symposium on Modelling in Fruit Research and Orchard Management, Jun 2015, Montpellier, France. 1 p. ⟨hal-01237387⟩
  • Mikolaj Cieslak, Michel Génard, Frédéric Boudon, Valentina Baldazzi, Christophe Godin, et al.. Integrating architecture and physiological perspectives in fruit development. 7th International conference on functional-structural plant models (FSPM 2013),, Jun 2013, Saariselkä, Finland. ⟨hal-02745577⟩
  • Frédéric Boudon, Chakkrit Preuksakarn, Pascal Ferraro, Julien Diener, Ekko Nikinmaa, et al.. Quantitative assessment of automatic reconstructions of branching systems. 7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.64-66. ⟨hal-00850796⟩
  • Christophe Pradal, Julien Coste, Frédéric Boudon, Christian Fournier, Christophe Godin. OpenAlea 2.0: Architecture of an integrated modeling environment on the web. 7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.213. ⟨hal-00850931⟩
  • Julien Diener, Phillipe Nacry, Christophe Périn, Anne Diévart, Xavier Draye, et al.. An automated image-processing pipeline for high-throughput analysis of root architecture in OpenAlea. 7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.85-87. ⟨hal-00850814⟩
  • Mikolaj Cieslak, M. Génard, Frédéric Boudon, Valentina Baldazzi, Christophe Godin, et al.. Integrating architecture and physiological perspectives in fruit development. 7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.127-130. ⟨hal-00850801⟩
  • Mathilde Balduzzi, Frédéric Boudon, Christophe Godin. Optimal 3D reconstruction of plants canopy from terrestrial laser scanner data by fusion of the 3D point information and the intensity value. 7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.58-60. ⟨hal-00850793⟩
  • Steven Longay, Adam Runions, Frédéric Boudon, Premyslaw Prusinkiewicz. TreeSketch: Interactive Procedural Modeling of Trees on a Tablet. EUROGRAPHICS Symposium on Sketch-Based Interfaces and Modeling, 2012, Cagliari, Italy. ⟨hal-00828850⟩
  • Gaëtan Louarn, Serge Carré, Frédéric Boudon, Annie Eprinchard, Didier Combes. Characterization of whole plant leaf area properties using laser scanner point clouds. Fourth International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, 2012, Shanghai, China. ⟨hal-00828841⟩
  • Liqi Han, Evelyne Costes, Frédéric Boudon, Thomas Cokelaer, Christophe Pradal, et al.. Investigating the Influence of Geometrical Traits on Light Interception Efficiency of Apple Trees: a Modelling Study with MAppleT. International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Oct 2012, Shangai, China. pp.152-159. ⟨hal-00790650⟩
  • Gaëtan Louarn, Serge Carre, Frédéric Boudon, Annie Eprinchard, Didier Combes. Characterization of whole plant leaf area properties using laser scanner point clouds. 4. International Symposium on Plant growth Modeling, Simulation, Visualization and Applications, Oct 2012, Shangai, China. 472 p. ⟨hal-01190460⟩
  • Mikolaj Cieslak, Frédéric Boudon, Samir Kenouche, Michel Zanca, Christophe Goze-Bac, et al.. Generating 3D volumetric meshes of internal and external fruit structure. HortiModel2012 -- Models for Plant Growth, Environmental Control and Farm Management in Protected Cultivation. Acta Horticulturae., 2012, Nanjing, China. ⟨hal-00828843⟩
  • Jérôme Guénard, Géraldine Morin, Frédéric Boudon, Vincent Charvillat. Realistic Plant Modeling from Images Based on Analysis-by-Synthesis. 8th International Conference on Mathematical Methods for Curves and Surfaces (MMCS 2012), Jun 2012, Oslo, Norway. pp.213-229, ⟨10.1007/978-3-642-54382-1_12⟩. ⟨hal-01148822v2⟩
  • Frédéric Boudon, Christophe Pradal. L-Py: L-Systems in Python. EuroSciPy 2011, 2011, Paris, France. ⟨hal-00828857⟩
  • Ligi Han, Jean-Christophe Soulié, Frédéric Boudon, David da Silva, Thomas Cokelaer, et al.. Sensitivity Analysis of Light Interception to Geometrical Traits of Apple Trees: an in silico Study based on MAppleT model. 9th International Symposium on Modelling in Fruit Research and Orchard Management, 2011, Saint-Jean-sur-Richelieu, Canada. ⟨hal-00828858⟩
  • Liqi Han, Jean-Christophe Soulie, Frédéric Boudon, David da Silva, Thomas Cokelaer, et al.. Sensitivity analysis of light interception to geometrical traits of Apple trees: an in silico study based on MAppleT Model. 9. International Symposium on modelling in Fruit Research and Orchard management, International Society for Horticultural Science (ISHS). Louvain, INT., Jun 2011, Saint-Jean-Sur-Richelieu, Canada. ⟨hal-01269213⟩
  • Jérôme Guénard, Géraldine Morin, Frédéric Boudon, Pierre Gurdjos, Vincent Charvillat. Reconstruction de modèles virtuels de vignes à partir d'images. ORASIS - Congrès des jeunes chercheurs en vision par ordinateur, INRIA Grenoble Rhône-Alpes, Jun 2011, Praz-sur-Arly, France. ⟨inria-00595483⟩
  • Jérôme Guénard, Charlotte Giron, Géraldine Morin, Pierre Gurdjos, Frédéric Boudon, et al.. Modélisation de vignes à partir d'une séquence d'images. 23èmes journées de l'Association Francophone d'Informatique Graphique, 2010, Dijon, France. ⟨hal-00831787⟩
  • Chakkrit Preuksakarn, Frédéric Boudon, Pascal Ferraro, Jean-Baptiste Durand, Ekko Nikinmaa, et al.. Reconstructing Plant Architecture from 3D Laser scanner data. 6th International Workshop on Functional-Structural Plant Models, Sep 2010, Davis, United States. pp.12--17. ⟨hal-00490064⟩
  • Anne-Laure Gaillard, Pascal Ferraro, Frédéric Boudon, Christophe Godin. Lossy compression of plant architectures. 6th International Workshop on Functional-Structural Plant Models, Sep 2010, Davis, United States. pp.10--13. ⟨hal-00490061⟩
  • Anne-Laure Gaillard, Pascal Ferraro, Frédéric Boudon, Christophe Godin. Lossy compression of tree architectures. 6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.12-15. ⟨hal-00831783⟩
  • Frédéric Boudon, Thomas Cokelaer, Christophe Pradal, Christophe Godin. L-Py, an open L-systems framework in Python. 6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.116-119. ⟨hal-00831780⟩
  • Christian Fournier, Christophe Pradal, Gaëtan Louarn, Didier Combes, Jean-Christophe Soulié, et al.. Building modular FSPM under OpenAlea: concepts and applications. 6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.109-112. ⟨hal-01192232v2⟩
  • Andra Doran, Sébastien Mondet, Romulus Grigoras, Géraldine Morin, Wei Tsang Ooi, et al.. A Demonstration of MobiTree: Progressive 3D Tree Models Streaming on Mobile Clients. ACM Multimedia 2009, 2009, Beijing, China. pp.955-956, ⟨10.1145/1631272.1631465⟩. ⟨hal-00831796⟩
  • Dong-Ming Yan, Julien Wintz, Bernard Mourrain, Wenping Wang, Frédéric Boudon, et al.. Efficient and robust reconstruction of botanical branching structure from laser scanned points. CAD/Graphics 2009, Aug 2009, Yellow Mountain City, China. pp.572-575. ⟨inria-00436480⟩
  • Christian Fournier, Christophe Pradal, Michaël Chelle, Frédéric Boudon, Gaëtan Louarn, et al.. Sharing efforts for modelling plant systems: from publications to reusable software components. Comparative Biochemistry and Physiology - Part A: Molecular& Integrative Physiology, 2009, Glasgow, United Kingdom. pp.S222, ⟨10.1016/j.cbpa.2009.04.549⟩. ⟨hal-00831802⟩
  • Sébastien Mondet, Wei Cheng, Géraldine Morin, Romulus Grigoras, Frédéric Boudon, et al.. Streaming of Plants in Distributed Virtual Environments. ACM Multimedia 2008 - Systems and Networking Track, 2008, Vancouver, BC, Canada. pp.1-10, ⟨10.1145/1459359.1459361⟩. ⟨hal-00831813⟩
  • Christophe Pradal, Samuel Dufour-Kowalski, Frédéric Boudon, Nicolas Donès. The architecture of OpenAlea: A visual programming and component based software for plant modeling. 5th International Workshop on Functional-Structural Plant Models, 2007, Napier, New Zealand. pp.25, 1--4. ⟨hal-00831829⟩
  • Sébastien Mondet, Frédéric Boudon, Jean-Christophe Hoelt, Géraldine Morin, Romulus Grigoras, et al.. Compression progressive de modèles de plantes à base de cylindres généralisés. 20eme journées de l'Association Francophone d'Informatique Graphique, 2007, Marne-la-Vallée, France. pp.197-204. ⟨hal-00831815⟩
  • Christophe Pradal, Samuel Dufour-Kowalski, Frédéric Boudon, Christian Fournier, Christophe Godin. OpenAlea: a visual programming and component-based software platform for plant modelling. 5th International Workshop on Functional Structural Plant Models, Nov 2007, Napier, New Zealand. pp.751-760, ⟨10.1071/fp08084⟩. ⟨hal-02757859⟩
  • David da Silva, Philippe Balandier, Frédéric Boudon, André Marquier, Christophe Pradal, et al.. Modeling of light transmission under heterogeneous forest canopy: model description and validation. 5th International Workshop on Functional-Structural Plant Models, 2007, Napier, New Zealand. pp.58, 1--4. ⟨hal-00831822⟩
  • Samuel Dufour-Kowalski, Christophe Pradal, Nicolas Dones, Pierre Barbier de Reuille, Frédéric Boudon, et al.. OpenAlea: An open-source platform for the integration of heterogeneous FSPM components. FSPM07 - 5th International Workshop on Functional-Structural Plant Models, Nov 2007, Napier, New Zealand. pp.P36:1-2. ⟨hal-00831824⟩
  • Britta Kurz, Jean-Pierre Lagouarde, Patrick Moreau, Dominique Guyon, Isabelle Champion, et al.. Modelling directional anisotropy of thermal infrared measurements over a Pine forest canopy. 2. International Symposium on Recent Advances in Quantitative Remote Sensing (RAQRS'II), Sep 2006, Torrent, Spain. ⟨hal-02754084⟩
  • Christophe Pradal, Frédéric Boudon, Nicolas Dones, Jean-Baptiste Durand, Pierre Barbier de Reuille, et al.. OpenAlea : a platform for plant modelling, analysis and simulation. Python Conference Europython, 2006, Genève, Switzerland. 16 p. ⟨hal-01189325⟩
  • David da Silva, Frédéric Boudon, Christophe Godin, Olivier Puech, Colin Smith, et al.. A Critical Appraisal of the Box Counting Method to Assess the Fractal Dimension of Tree Crowns. Second International Symposium, ISVC 2006, 2006, France. pp.751-760. ⟨hal-00120795⟩
  • Christophe Godin, O. Puech, F. Boudon, Hervé Sinoquet. Space occupation by tree crowns obeys fractals: evidence from 3D digitized plants. 4. International Workshop on functional-structural plant models, Jun 2004, Montpellier, France. ⟨hal-01190896⟩
  • Christophe Godin, Olivier Puech, Frédéric Boudon, Hervé Sinoquet. Space occupation by tree crowns obeys fractals laws: evidence from 3D digitized plants. 4th International Workshop on Functional-Structural Plant Models, 2004, Montpellier, France. pp.79-83. ⟨hal-00830081⟩
  • Christophe Pradal, Nicolas Dones, Christophe Godin, Pierre Barbier de Reuille, Frédéric Boudon, et al.. ALEA: A software for integrating analysis and simulation tools for 3D architecture and ecophysiology. 4. International Workshop on Functional-Structural plant model, Jun 2004, Montpellier, France. ⟨hal-01189240⟩

Poster communications12 documents

  • Aude Coupel-Ledru, Benoit Pallas, Magalie Delalande, Brunella Morandi, Luigi Manfrini, et al.. Genetic analysis of the morphological and ecophysiological responses to water deficit in an apple tree core-collection through a combination of high-throughput and physiological approaches. 5. AgreenSkills Annual Meeting, Jun 2018, Edinbourg, United Kingdom. 2018. ⟨hal-02791152⟩
  • Frédéric Boudon, S. Persello, I. Grechi, André Marquier, C. Soria, et al.. Assessment of the role of ageing and light availability in leaf mortality in mango tree. The 30th International Horticultural Congress, Aug 2018, Istanbul, Turkey. International Society for Horticultural Science (ISHS), 2018, IHC2018. ⟨hal-01878284⟩
  • Frédéric Normand, Frédéric Boudon, Mathilde Capelli, Anaëlle Dambreville, Pierre-Eric Lauri. Linking vegetative growth,reproduction and irregular bearing in the mango tree. International Symposium on Flowering, Fruit set and Alternate Bearing, Jun 2017, Palermo, Italy. University of Palermo, Sicile, p.90, 1diaporama (17vues), 2017, Book of abstracts. ⟨hal-01606235⟩
  • Francesco Reyes, Benoit Pallas, Christophe Pradal, D Zanotelli, Frédéric Boudon, et al.. Exploring carbon allocation with a multi-scale model: the case of apple. International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, Qingdao, China. 2016. ⟨hal-01602913⟩
  • Frédéric Boudon, Severine Persello, Alexandra Jestin, Anne-Sarah Briand, Pierre Fernique, et al.. An FSPM approach for modeling fruit yield and quality in mango trees. IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, Qingdao, China. ⟨hal-01400016⟩
  • Jessica Bertheloot, François Barbier, Frédéric Boudon, Maria-Dolores Perez-Garcia, Thomas Péron, et al.. Modelling physiological regulation of bud burst by sucrose and auxin. IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, QingDao, China. ⟨hal-01400025⟩
  • Shouyang Liu, Frédéric Baret, Frédéric Boudon, Christian Fournier, Bruno Andrieu, et al.. Estimating canopy characteristics from ground-based LiDAR measurement assisted with 3D Adel-Wheat model. FSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, Nov 2016, Qingdao, China. 2016. ⟨hal-01400001⟩
  • Shouyang Liu, Frederic Baret, Frédéric Boudon, Christian Fournier, Bruno Andrieu, et al.. Estimating canopy characteristics from ground-based LiDAR measurement assisted with 3D Adel-Wheat model. FSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, Nov 2016, Qingdao, China. 2016, 2016 IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016). ⟨hal-01438612⟩
  • Christian Fournier, Frédéric Boudon, Michaël Chelle, M. Saudreau, Jérôme Ngao, et al.. Toward the inter-comparison of radiation transfert model for plant modelling application. IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, QingDao, China. ⟨hal-01400026⟩
  • Frederic Boudon, André Jestin, Anne-Sarah Briand, Pierre Fernique, Pierre-Eric Lauri, et al.. The role of structural and temporal factors in the architectural development of the mango Tree: evidences from simulation. X International Symposium on Modelling in Fruit Research and Orchard Management, Jun 2015, Montpellier, France. International Society for Horticultural Science, Acta Horticulturae, 1160, 430 p., 2017, X International Symposium on Modelling in Fruit Research and Orchard Management. ⟨10.17660/ActaHortic.2017.1160.12⟩. ⟨hal-01605996⟩
  • Isabelle Grechi, Frédéric Boudon, Mathieu Léchaudel, Thibault Nordey, Michel Génard, et al.. Modelling fruit yield and quality on the Mango tree: Recent progresses and future steps. International Symposium on Modelling in Fruit Research and Orchard Management, Jun 2015, Montpellier, France. 2015. ⟨hal-01193184⟩
  • Christophe Pradal, Julien Coste, Frédéric Boudon, Christian Fournier, Christophe Godin. OpenAlea 2.0: Architecture of an integrated modeling environment on the web. 7. International Conference on Functional Structure Plant Models, Jun 2013, Saariselkä, Finland. Finnish Society of Forest Science, 2013. ⟨hal-01578851⟩

Book sections2 documents

  • Jérôme Guénard, Géraldine Morin, Frédéric Boudon, Vincent Charvillat. Reconstructing Plants in 3D from a Single Image Using Analysis-by-Synthesis. Bebis; George and Boyle; Victor and Klosowski; James and Coquillart; Sabine and Luo; Xun and Chen; Min and Gotz; David; Richard and Parvin; Bahram and Koracin; Darko and Li; Baoxin and Porikli; Fatih and Zordan. Advances in Visual Computing, 8033, Springer Berlin Heidelberg, pp.322--332, 2013, Lecture Notes in Computer Science, 978-3-642-41913-3. ⟨10.1007/978-3-642-41914-0_32⟩. ⟨hal-00931231⟩
  • David da Silva, Frédéric Boudon, Olivier Puech, Colin Smith, Hervé Sinoquet. A critical appraisal of the box counting method to assess the fractal dimension of tree crowns. ISVC 2006, 2006. ⟨hal-01189202⟩

Directions of work or proceedings1 document

  • Christophe Pradal, Samuel Dufour-Kowalski, Frédéric Boudon, Nicolas Dones. The architecture of OpenAlea: a visual programming and component based software for plant modeling. 5. International Workshop on Functional-Structural Plant Models, 2009, Napier, New Zealand. pp.25, 2007. ⟨hal-01189272⟩

Reports4 documents

  • Christophe Pradal, Frédéric Boudon, Christophe Nouguier, Jérôme Chopard, Christophe Godin. PlantGL : a Python-based geometric library for 3D plant modelling at different scales. [Research Report] RR-6367, INRIA. 2007. ⟨inria-00191126v3⟩
  • Frédéric Boudon, Alexandre Meyer, Christophe Godin. Survey on Computer Representations of Trees for Realistic and Efficient Rendering. [Research Report] 2301, LIRIS UMR CNRS 5205. 2006. ⟨hal-00830069⟩
  • Frédéric Boudon, Christophe Nouguier, Christophe Godin. GEOM Module manual: II Developer guide. [Technical Report] 2001. ⟨hal-00827472⟩
  • Frédéric Boudon, Christophe Nouguier, Christophe Godin. GEOM Module manual: I User guide. [Technical Report] 2001. ⟨hal-00827471⟩

Theses1 document

  • Frédéric Boudon. Représentation géométrique multi-échelles de l'architecture des plantes. Modélisation et simulation. Université Montpellier II - Sciences et Techniques du Languedoc, 2004. Français. ⟨tel-00552120⟩

Software1 document

  • Christophe Pradal, Christian Fournier, Frédéric Boudon, Patrick Valduriez, Esther Pacitti, et al.. OpenAlea. 2019. ⟨hal-02100181⟩