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Genetic analyses unravel the crucial role of a horizontally acquired alginate lyase for brown algal biomass degradation by Z obellia galactanivorans

 Yongtao Zhu , François Thomas , Robert Larocque , Nan Li , Delphine Duffieux , et al.
Environmental Microbiology, 2017, ⟨10.1111/1462-2920.13699⟩
Article dans une revue hal-01503166v1
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Environmental and gut bacteroidetes: the food connection

 François Thomas , Jan-Hendrik Hehemann , Etienne Rebuffet , Mirjam Czjzek , Gurvan Michel
Frontiers in Microbiology, 2011, 2, pp.93. ⟨10.3389/fmicb.2011.00093⟩
Article dans une revue hal-00925466v1
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Herbivore-induced chemical and molecular responses of the kelps Laminaria digitata and Lessonia spicata

 Andrés A Ritter , Léa Cabioch , Loraine A Brillet-Guéguen , Erwan A Corre , Audrey A Cosse , et al.
PLoS ONE, 2017, 12 (3), pp.e0173315. ⟨10.1371/journal.pone.0173315.s011⟩
Article dans une revue hal-01587420v1

DNA−SIP and metagenomic revealed shifts in active phenanthrene−degrading bacteria of rhizosphere and bulk soil from a historically contaminated site

 Aurélie Cébron , François Thomas , Erwan Corre
14th Symposium on Bacterial Genetics and Ecology, BAGECO, Jun 2017, Aberdeen, United Kingdom
Poster de conférence hal-03145407v1
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Seasonal dynamics of a glycan‐degrading flavobacterial genus in a tidally mixed coastal temperate habitat

 Maéva Brunet , Nolwen Le Duff , Fabienne Rigaut-Jalabert , Sarah Romac , Tristan Barbeyron , et al.
Environmental Microbiology, In press, ⟨10.1111/1462-2920.16505⟩
Article dans une revue hal-04260403v1
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Connecting Algal Polysaccharide Degradation to Formaldehyde Detoxification

 Stefan Brott , François Thomas , Maike Behrens , Karen Methling , Daniel Bartosik , et al.
ChemBioChem, 2022, 23 (14), pp.e202200269. ⟨10.1002/cbic.202200269⟩
Article dans une revue hal-03822270v1
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Novel laminarin-binding CBMs in multimodular proteins of marine Bacteroidota feature prominently in phytoplankton blooms

 Marie-Katherin Zühlke , Elizabeth Ficko-Blean , Daniel Bartosik , Nicolas Terrapon , Alexandra Jeudy , et al.
2023
Pré-publication, Document de travail hal-04260572v1

Kelps feature systemic defense responses: insights into the evolution of innate immunity in multicellular eukaryotes.

 François Thomas , Audrey Cosse , Sophie Le Panse , Bernard Kloareg , Philippe Potin , et al.
New Phytologist, 2014, 204 (3), pp.567-76
Article dans une revue hal-01113853v1
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Isotopic tracing reveals single-cell assimilation of a macroalgal polysaccharide by a few marine Flavobacteria and Gammaproteobacteria

 François Thomas , Nolwen Le Duff , Ting-Di Wu , Aurélie Cébron , Stéphane Uroz , et al.
The International Society of Microbiologial Ecology Journal, 2021, 15 (10), pp.3062-3075. ⟨10.1038/s41396-021-00987-x⟩
Article dans une revue hal-03220808v1
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How do deep-sea hot spring ecosystems work?

 Stefan Sievert , Jesse Mcnichol , François Thomas
Science Journal for Kids, 2018
Article dans une revue hal-02404329v1
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Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans Dsij T

 Tristan Barbeyron , François Thomas , Valérie Barbe , Hanno Teeling , Chantal Schenowitz , et al.
Environmental Microbiology, 2016, Ecology and Physiology of Marine Microbes, 18 (12), pp.4610-4627. ⟨10.1111/1462-2920.13584⟩
Article dans une revue hal-02137896v1

Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia galactanivorans

 Jan-Hendrik Hehemann , Gaëlle Correc , François Thomas , Thomas Thomas , Tristan Barbeyron , et al.
Journal of Biological Chemistry, 2012, 287 (36), pp.30571-30584. ⟨10.1074/jbc.M112.377184⟩
Article dans une revue hal-02108464v1

Exploration de la diversité des bactéries marines dégradant les macroalgues par marquage isotopique

 François Thomas , Nolwen Le Duff , Pascal Riera , Aurélie Cébron , Cédric Leroux , et al.
IXème colloque AFEM, Nov 2019, Bussang, France
Poster de conférence hal-03145502v1
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Regulation of alginate catabolism involves a GntR family repressor in the marine flavobacterium Zobellia galactanivorans DsijT

 Magda Dudek , Anissa Dieudonné , Diane Jouanneau , Tatiana Rochat , Gurvan Michel , et al.
Nucleic Acids Research, 2020, 48 (14), pp.7786-7800. ⟨10.1093/nar/gkaa533⟩
Article dans une revue hal-02938399v1

Novel laminarin-binding CBMs in multimodular proteins of marine Bacteroidota feature prominently in phytoplankton blooms

 Marie-Katherin Zühlke , Elizabeth Ficko-Blean , Daniel Bartosik , Nicolas Terrapon , Alexandra Jeudy , et al.
BioRxiv, 2023, ⟨10.1101/2023.09.07.556657⟩
Article dans une revue hal-04457533v1

Thermo-mechanical controls on intra-plate deformation and the role of plume-folding interactions in continental topography

 Sierd Cloetingh , Evgenii Burov , François Thomas
Gondwana Research, 2013, 24 (3-4), pp.815-837. ⟨10.1016/j.gr.2012.11.012⟩
Article dans une revue istex hal-01487767v1
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Comparative characterization of two marine alginate lyases from Zobellia galactanivorans reveals distinct modes of action and exquisite adaptation to their natural substrate.

 François Thomas , Lena C E Lundqvist , Murielle Jam , Alexandra Jeudy , Tristan Barbeyron , et al.
Journal of Biological Chemistry, 2013, 288 (32), pp.23021-37. ⟨10.1074/jbc.M113.467217⟩
Article dans une revue hal-00998611v1
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Waterborne signaling primes the expression of elicitor-induced genes and buffers the oxidative responses in the brown alga Laminaria digitata.

 François Thomas , Audrey Cosse , Sophie Goulitquer , Stefan Raimund , Pascal Morin , et al.
PLoS ONE, 2011, 6 (6), pp.e21475. ⟨10.1371/journal.pone.0021475⟩
Article dans une revue hal-00925488v1
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Bacterial strategies for biogeochemical transformations: diversity, mechanisms, regulations and environmental drivers

 François Thomas
Bacteriology. Sorbonne Université, 2021
HDR tel-04092426v1
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Zobellia roscoffensis sp. nov. and Zobellia nedashkovskayae sp. nov., two flavobacteria from the epiphytic microbiota of the brown alga Ascophyllum nodosum, and emended description of the genus Zobellia

 Tristan Barbeyron , Manon Thiébaud , Nolwen Le Duff , Marjolaine Martin , Erwan Corre , et al.
International Journal of Systematic and Evolutionary Microbiology, 2021, 71 (8), pp.004913. ⟨10.1099/ijsem.0.004913⟩
Article dans une revue hal-03357314v1

Primary productivity below the seafloor at deep-sea hot springs

 Jesse Mcnichol , Hryhoriy Stryhanyuk , Sean Sylva , François Thomas , Niculina Musat , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (26), pp.6756-6761. ⟨10.1073/pnas.1804351115⟩
Article dans une revue hal-02322725v1
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Identification et caractérisation du système alginolytique de la bactérie marine Zobellia galactanivorans

 François Thomas
Microbiologie et Parasitologie. Paris 6, 2011. Français. ⟨NNT : ⟩
Thèse tel-01110859v1
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Evaluation of a new primer combination to minimize plastid contamination in 16S rDNA metabarcoding analyses of alga‐associated bacterial communities

 François Thomas , Simon Dittami , Maéva Brunet , Nolwen Le Duff , Gwenn Tanguy , et al.
Environmental Microbiology Reports, 2019, 12 (1), pp.30-37. ⟨10.1111/1758-2229.12806⟩
Article dans une revue hal-02404303v1
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Zobellia alginiliquefaciens sp. nov., a novel member of the flavobacteria isolated from the epibiota of the brown alga Ericaria zosteroides (C. Agardh) Molinari & Guiry 2020

 Tristan Barbeyron , Nolwen Le Duff , Eric Duchaud , François Thomas
International Journal of Systematic and Evolutionary Microbiology, 2023, 73 (6), pp.005924. ⟨10.1099/ijsem.0.005924⟩
Article dans une revue hal-04199452v1
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Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses

 François Thomas , Philippe Bordron , Damien Eveillard , Gurvan Michel
Frontiers in Microbiology, 2017, 8, pp.article 1808. ⟨10.3389/fmicb.2017.01808⟩
Article dans une revue hal-01613034v1
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Structure-function analysis of a new PL17 oligoalginate lyase from the marine bacterium Zobellia galactanivorans Dsij T

 Diane Jouanneau , Leesa J Klau , Robert Larocque , Agathe Jaffrennou , Ghislain Duval , et al.
Glycobiology, 2021, 23 (3), pp.1638-1655. ⟨10.1093/glycob/cwab058⟩
Article dans une revue hal-03357278v1
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Unique alcohol dehydrogenases involved in algal sugar utilization by marine bacteria

 Stefan Brott , Ki Hyun Nam , François Thomas , Theresa Dutschei , Lukas Reisky , et al.
Applied Microbiology and Biotechnology, 2023, 107 (7-8), pp.2363-2384. ⟨10.1007/s00253-023-12447-x⟩
Article dans une revue hal-04234624v1
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Functional Characterization of a L-2-Haloacid Dehalogenase From Zobellia galactanivorans DsijT Suggests a Role in Haloacetic Acid Catabolism and a Wide Distribution in Marine Environments

 Eugénie Grigorian , Agnès Groisillier , François Thomas , Catherine Leblanc , Ludovic Delage
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.725997⟩
Article dans une revue hal-03357342v1
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Stable isotope probing and metagenomics highlight the effect of plants on uncultured phenanthrene-degrading bacterial consortium in polluted soil

 François Thomas , Erwan Corre , Aurélie Cebron
The International Society of Microbiologial Ecology Journal, 2019, 13 (7), pp.1814-1830. ⟨10.1038/s41396-019-0394-z⟩
Article dans une revue hal-02322773v1
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Isotopic labelling of cultured macroalgae and isolation of 13 C-labelled cell wall polysaccharides for trophic investigations

 François Thomas , Nolwen Le Duff , Cédric Leroux , Laurence Dartevelle , Pascal Riera
Advances in Botanical Research, 2020, ⟨10.1016/bs.abr.2019.11.005⟩
Chapitre d'ouvrage hal-03035113v1
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