FS
Francois Sabot
Directeur de Recherches IRD au sein de l'UMR DIADE
Directeur adjoint de la Mission Science Ouverte de l'IRD
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Documents
Affiliations actuelles
- 1100723
- 168433
Identifiants chercheurs
- francois-sabot
- 0000-0002-8522-7583
- IdRef : 083268391
Présentation
From an initial formation in Molecular Genetics and Physiology, I went during my PhD on Transposable Elements, working on large plant genomes at INRA, France. During my Post-Doc at university of Helsinki, I worked on mechanics, structure and evolution of TEs, in lab then in bioinformatics and NGS. My current research interest in the French National institute for Sustainable Development (IRD) is the Pangenomics modification during speciation/domestication, especially regarding TEs, in various genomes. In this regard, I explore with my team the pangenome in all aspects: creation, modification, graph theory, vizualisation, and so on...
In parallel, I spent (and continue to) large efforts on open science, through open source development, open access publication and open data dissemination, as the deputy director of the Open Science mission at IRD.
Publications
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Diving, and even diging, into the wild jungle of annotation pathways for non-vertebrate animals2022, pp.100016. ⟨10.24072/pci.genomics.100016⟩
Autre publication scientifique
hal-03661538v1
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Using small fragments to discover old TE remnants: the Duster approach empowers the TE detection2021, pp.100004. ⟨10.24072/pci.genomics.100004⟩
Autre publication scientifique
hal-03146002v1
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Identification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues2023
Pré-publication, Document de travail
hal-04285238v1
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An INDEL genomic approach to explore population diversity of phytoplankton : Bathycoccus , a case study2023
Pré-publication, Document de travail
hal-04286658v1
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Biological and genomic resources for the cosmopolitan phytoplanktonBathycoccus: Insights into genetic diversity and major structural variations2023
Pré-publication, Document de travail
hal-04286701v1
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Rapport du groupe de travail sur les cahiers de laboratoires électroniques[Rapport de recherche] Comité pour la science ouverte. 2021, 68 p
Rapport
hal-03563244v1
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Report of the Working Group on Electronic Lab NotebooksComité pour la science ouverte. 2021
Rapport
hal-03959882v1
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European Avalanche Test Sites -Overview and Analysis in View of Co-ordinated Experimentsirstea. 1998, pp.122
Rapport
hal-02578472v1
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Caracterisation et évolution des éléments transposables au sein du génome des espèces du complexe Triticum/AegilopsSciences du Vivant [q-bio]. Université Blaise Pascal (Clermont Ferrand 2), 2004. Français. ⟨NNT : ⟩
Thèse
tel-02825519v1
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