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On the robustness of the generalized fused lasso to prior specifications

 Vivian Viallon , Sophie Lambert-Lacroix , Holger Höfling , Franck Picard
Statistics and Computing, 2016, 26 (1), pp.285-301. ⟨10.1007/s11222-014-9497-6⟩
Article dans une revue hal-01067903v2

High-quality sequence clustering guided by network topology and multiple alignment likelihood.

 Vincent Miele , Simon Penel , Vincent Daubin , Franck Picard , Daniel Kahn , et al.
Bioinformatics, 2012, 28 (8), pp.1078-85. ⟨10.1093/bioinformatics/bts098⟩
Article dans une revue hal-00965711v1

Preprocessing and downstream analysis of microarray DNA copy number profiles

 M.A. van de Wiel , Franck Picard , W.N. van Wieringen , B. Ylstra
Briefings in Bioinformatics, 2010, 12 (1), pp.10-21. ⟨10.1093/bib/bbq004⟩
Article dans une revue hal-00539440v1

Dimeric G-quadruplex motifs determine a large fraction of strong replication origins in vertebrates

 Jérémy Poulet-Benedetti , Caroline Tonnerre-Doncarli , Anne-Laure Valton , Marc Laurent , Marie Gérard , et al.
BioRxiv, 2022, ⟨10.1101/2022.08.17.504255⟩
Article dans une revue hal-03932439v1
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High Dimensional Classification with combined Adaptive Sparse PLS and Logistic Regression

 Ghislain Durif , Laurent Modolo , Jakob Michaelsson , Jeff E. Mold , Sophie Lambert-Lacroix , et al.
Bioinformatics, 2018, 34 (3), pp.485-493. ⟨10.1093/bioinformatics/btx571⟩
Article dans une revue hal-01587360v1

Melanocortin-4 receptor mutations in a large cohort of severely obese adults: prevalence functional classification genotype-phenotype relationship and lack of association with binge eating

 C. Lubrano-Berthelier , B. Dubern , J.-M. Lacorte , Franck Picard , A. Shapiro , et al.
Journal of Clinical Endocrinology and Metabolism, 2006, 91, pp.1811-1818
Article dans une revue hal-00427994v1
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Modeling the structure and dynamics of the auxin signaling network in the shoot apical meristem

 Etienne Farcot , Yann Guédon , Géraldine Brunoud , Jonathan Legrand , Hilde van Den Daele , et al.
6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, Canada. pp.146-148
Communication dans un congrès hal-00831786v1
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Adaptive Generalized Fused-Lasso: Asymptotic Properties and Applications

 Vivian Viallon , Sophie Lambert-Lacroix , Holger Höfling , Franck Picard
2013
Pré-publication, Document de travail hal-00813281v1
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A mixture model for random graphs

 Jean-Jacques Daudin , Franck Picard , Stéphane Robin
[Research Report] RR-5840, INRIA. 2006, pp.19
Rapport inria-00070186v1
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The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells.

 Franck Picard , Jean-Charles Cadoret , Benjamin Audit , Alain Arneodo , Adriana A. Alberti , et al.
PLoS Genetics, 2014, 10 (5), pp.e1004282. ⟨10.1371/journal.pgen.1004282⟩
Article dans une revue hal-00995097v1
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Spatially constrained clustering of ecological networks

 Vincent Miele , Franck Picard , S. Dray
Methods in Ecology and Evolution, 2014, 5 (8), pp.771-779. ⟨10.1111/2041-210X.12208⟩
Article dans une revue hal-02045124v1
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Uniform Deconvolution for Poisson Point Processes

 Anna Bonnet , Claire Lacour , Franck Picard , Vincent Rivoirard
Journal of Machine Learning Research, 2022, 23 (194), pp.1--36
Article dans une revue hal-02964117v2

A mixture model for random graphs

 Jean-Jacques Daudin , Franck Picard , Stephane Robin
Statistics and Computing, 2008, 18 (2), pp.173-183. ⟨10.1007/s11222-007-9046-7⟩
Article dans une revue hal-01197587v1

Uncovering structure in biological networks

 J.J. Daudin , Vincent Lacroix , M. Mariadassou , V. Miele , Franck Picard , et al.
incollection, 2006, --, pp.471-483
Article dans une revue hal-00427936v1

Assessing the exceptionality of network motifs

 Franck Picard , J.-J. Daudin , M. Koskas , S. Schbath , S. Robin
Journal of Computational Biology, 2008, 15, pp.1-20
Article dans une revue hal-00428157v1

Computing power in case-control association studies through the use of quadratic approximations: application to meat-statistics

 M. Guedj , E. Della-Chiesa , Franck Picard , Gregory Nuel
Annals of Human Genetics, 2007, --, pp.57-62
Article dans une revue hal-00434865v1
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A new genome-wide method to track horizontally transferred sequences: application to Drosophila

 L. Modolo , Franck Picard , E. Lerat
Genome Biology and Evolution, 2014, 6 (2), pp.416-32. ⟨10.1093/gbe/evu026⟩
Article dans une revue hal-02045117v1

Bioinformatics developments for NGS data analysis at PRABI

 F. Picard , Guy Perrière
EMBNet.journal, 2011, 17, pp.12
Article dans une revue hal-02297662v1
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Probabilistic Count Matrix Factorization for Single Cell Expression Data Analysis

 Ghislain Durif , Laurent Modolo , Jeff E Mold , Sophie Lambert-Lacroix , Franck Picard
Bioinformatics, 2019, 35, 20, pp.4011-4019. ⟨10.1093/bioinformatics/btz177⟩
Article dans une revue hal-01649275v3
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The wild grape genome sequence provides insights into the transition from dioecy to hermaphroditism during grape domestication

 Hélène E Badouin , Amandine Velt , François Gindraud , Timothée Flutre , Vincent Dumas , et al.
Genome Biology, 2020, 21 (1), pp.223. ⟨10.1186/s13059-020-02131-y⟩
Article dans une revue hal-02946414v1

Assessing the exceptionality of network motifs

 Franck Picard , Jean-Jacques Daudin , Michel Koskas , Sophie Schbath , Stephane Robin
Journal of Computational Biology, 2008, 15 (1), pp.1-20. ⟨10.1089/cmb.2007.0137⟩
Article dans une revue hal-01197499v1
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Genomic imprinting mediates dosage compensation in a young plant XY system.

 Aline Muyle , Niklaus Zemp , Cécile Fruchard , Radim Cegan , Jan Vrána , et al.
2018
Pré-publication, Document de travail hal-01851376v1

Statistiques et Génome

 Franck Picard , S. Schbath , E. Lebarbier , Pierre Neuvial , J. Chiquet
Gazette des Mathématiciens, 2011, 130, pp.1-32
Article dans une revue hal-00698143v1

Obesity-associated mutations in the melanocortin-4 receptor provide novel insights into its function

 C. Govaerts , S. Srinivasan , A. Shapiro , S. Zhang , Franck Picard , et al.
Peptides, 2005, 26, pp.1909-1919
Article dans une revue hal-00427759v1
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A Probabilistic Graph Coupling View of Dimension Reduction

 Hugues van Assel , Thibault Espinasse , Julien Chiquet , Franck Picard
Advances in Neural Information Processing Systems, Nov 2022, Nouvelle-Orleans, United States. pp.10696-10708
Communication dans un congrès hal-03548776v3
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Detecting sex-linked genes using genotyped individuals sampled in natural populations

 Jos Käfer , Nicolas Lartillot , Gabriel Marais , Franck Picard
2020
Pré-publication, Document de travail hal-02490340v1
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Kernel-Based Testing for Single-Cell Differential Analysis

 Anthony Ozier-Lafontaine , Camille Fourneaux , Ghislain Durif , Céline Vallot , Olivier Gandrillon , et al.
2023
Pré-publication, Document de travail hal-04214858v1
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Clustering of strong replicators associated with active promoters is sufficient to establish an early-replicating domain

 Caroline Brossas , Anne-Laure Valton , Sergey V Venev , Sabarinadh Chilaka , Antonin Counillon , et al.
EMBO Journal, 2020, ⟨10.15252/embj.201899520⟩
Article dans une revue hal-03023038v1

Deciphering the connectivity structure of biological networks using MixNet

 Franck Picard , V. Miele , L. Cottret , J.J. Daudin , S. Robin
BMC Bioinformatics, 2009, in press, pp.1-1
Article dans une revue hal-00391483v1
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A statistical approach for CGH microarray data analysis

 Franck Picard , Stéphane Robin , Marc Lavielle , Christian Vaisse , Gilles Celeux , et al.
[Research Report] RR-5139, INRIA. 2004
Rapport inria-00071444v1
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