Towards creating longer genetic sequences with GANs: Generation in principal component space
Antoine Szatkownik
,
Cyril Furtlehner
,
Guillaume Charpiat
,
Burak Yelmen
,
Flora Jay
MLCB 2023 - 18th Conference on Machine Learning in Computational Biology , Nov 2023, Seattle, United States
Communication dans un congrès
hal-04419057v1
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Impact of yeast cell cycle specificity on demography inference
Louis Ollivier
,
Flora Jay
,
Fanny Pouyet
JOBIM (Journées Ouvertes en Biologie, Informatique et Mathématiques ) 2022 , Jul 2022, Rennes, France
Poster de conférence
hal-04393823v1
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Determination of genetic relatedness from low-coverage human genome sequences using pedigree simulations
Michael Martin
,
Flora Jay
,
Sergi Castellano
,
Montgomery Slatkin
Article dans une revue
hal-01676698v1
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dnadna: a deep learning framework for population genetics inference
Théophile Sanchez
,
Erik Madison Bray
,
Pierre Jobic
,
Jérémy Guez
,
Anne-Catherine Letournel
,
et al.
Article dans une revue
hal-03352910v4
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Dimension reduction adapted to paleogenomics
Séverine Liégeois
,
Olivier François
,
Flora Jay
Paris-Saclay Junior Conference on Data Science and Engineering , Sep 2018, Orsay, France
Poster de conférence
hal-01978650v1
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Creating Artificial Human Genomes Using Generative Models
Burak Yelmen
,
Aurelien Decelle
,
Linda Ongaro
,
Davide Marnetto
,
Francesco Montinaro
,
et al.
2019
Pré-publication, Document de travail
hal-02413942v1
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Understanding and inferring cultural transmission of reproductive success
Jérémy Guez
,
Guillaume Achaz
,
François Bienvenu
,
Jean Cury
,
Bruno Toupance
,
et al.
Probabilistic Modeling in Genomics , Mar 2022, Oxford, United Kingdom
Poster de conférence
hal-04016758v1
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Modèles à variables latentes en génétique des populations
Flora Jay
,
Michael G B Blum
,
Olivier François
Journal de la Société Française de Statistique , 2011, 152, pp.3-20
Article dans une revue
hal-00861855v1
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Forecasting changes in population genetic structure of alpine plants in response to global warming.
Flora Jay
,
Stéphanie Manel
,
Nadir Alvarez
,
Eric y Durand
,
Wilfried Thuiller
,
et al.
Article dans une revue
istex
hal-00775883v1
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An ABC method for whole-genome sequence data: inferring paleolithic and neolithic human expansions
Flora Jay
,
Simon Boitard
,
Frédéric Austerlitz
2018
Pré-publication, Document de travail
hal-01896856v1
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Inferring demographic history from whole genome using Approximate Bayesian Computation
Simon S. Boitard
,
Flora Jay
,
Frédéric Austerlitz
Annual meeting of the American Society of Human Genetics (ASHG) , Oct 2014, San Diego, United States. 2014
Poster de conférence
hal-02793071v1
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Combiner arbres phylogénétiques et visualisation d'ensembles
Jean-Baptiste Lamy
,
Flora Jay
Atelier Visualisation d'informations, interaction et fouille de données , Jan 2020, Bruxelles, Belgique
Communication dans un congrès
hal-02968296v1
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End-to-End Deep Learning Approach for Demographic History Inference
Théophile Sanchez
,
Guillaume Charpiat
,
Flora Jay
Human Evolution: Fossils, Ancient and Modern Genomes 2017 , Nov 2017, Hinxton, Cambridge, United Kingdom
Poster de conférence
hal-01823543v1
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Predictions of native American population structure using linguistic covariates in a hidden regression framework.
Flora Jay
,
Olivier François
,
Michael G B Blum
Article dans une revue
hal-00655073v1
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Deep convolutional and conditional neural networks for large-scale genomic data generation
Burak Yelmen
,
Aurélien Decelle
,
Leila Lea Boulos
,
Antoine Szatkownik
,
Cyril Furtlehner
,
et al.
Article dans une revue
hal-04244818v1
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Reconstructing Past History from Whole-Genomes: An ABC Approach Handling Recombining Data
Flora Jay
,
Simon Boitard
,
Fréderic Austerlitz
Human Heredity , 2016, 81 (4), pp.224-224
Article dans une revue
hal-01602483v1
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Inference of population genetic structure from temporal samples of DNA
Olivier François
,
Séverine Liégeois
,
Benjamin Demaille
,
Flora Jay
2019
Pré-publication, Document de travail
hal-02413974v1
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Creating artificial human genomes using generative neural networks
Burak Yelmen
,
Aurélien Decelle
,
Linda Ongaro
,
Davide Marnetto
,
Corentin Tallec
,
et al.
Article dans une revue
hal-03149930v1
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Simulation-based Benchmarking of Ancient Haplotype Inference for Detecting Population Structure
Jazeps Medina Tretmanis
,
Flora Jay
,
María Ávila-Arcos
,
Emilia Huerta-Sanchez
2023
Pré-publication, Document de travail
hal-04244011v1
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Deep learning for population size history inference: Design, comparison and combination with approximate Bayesian computation
Théophile Sanchez
,
Jean Cury
,
Guillaume Charpiat
,
Flora Jay
Article dans une revue
hal-02942328v1
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Topological comparison of coalescent tree inference tools.
Ferdinand Petit
,
Jérémy Guez
,
Fanny Pouyet
,
Bruno Toupance
,
Evelyne Heyer
,
et al.
Congress of the European Society for Evolutionary Biology , Aug 2022, Prague (Czech Republic), Czech Republic
Communication dans un congrès
hal-03970653v1
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Variations de la taille d’une population : estimation à partir de génomes entiers.
Simon Boitard
,
Willy Rodríguez
,
Flora Jay
,
Stefano Mona
,
Frédéric Austerlitz
GDR AIEM , Nov 2016, Montpellier, France
Communication dans un congrès
hal-01605807v1
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Inferring Population Size History from Large Samples of Genome-Wide Molecular Data - An Approximate Bayesian Computation Approach.
Simon Boitard
,
Willy Rodríguez
,
Flora Jay
,
Stefano Mona
,
Frederic Austerlitz
conférence Jaques Monod "Coalescence des approches théoriques et expérimentales en génomique évolutive et biologie des systèmes" , 2016, Roscoff, France
Communication dans un congrès
hal-01604024v1
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Demographic history and genetic structure in pre-Hispanic Central Mexico
Viridiana Villa-Islas
,
Alan Izarraras-Gomez
,
Maximilian Larena
,
Elizabeth Mejía Perez Campos
,
Marcela Sandoval-Velasco
,
et al.
Article dans une revue
hal-04244008v1
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An Approximate Bayesian Computation approach to reconstruct demography from sequence data
Simon S. Boitard
,
Flora Jay
,
Frédéric Austerlitz
Annual Meeting Society for Molecular Biology and Evolution (SMBE) , Jul 2015, Vienne, Austria
Communication dans un congrès
hal-02799621v1
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The MUC19 gene in Denisovans, Neanderthals, and Modern Humans: An Evolutionary History of Recurrent Introgression and Natural Selection
Fernando Villanea
,
David Peede
,
Eli Kaufman
,
Valeria Añorve-Garibay
,
Kelsey Witt
,
et al.
2023
Pré-publication, Document de travail
hal-04244022v1
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SPI-DNA: End-to-end Deep Learning Approach for Demographic History Inference
Théophile Sanchez
,
Guillaume Charpiat
,
Flora Jay
Paris-Saclay Junior Conference on Data Science and Engineering , Sep 2017, Orsay, France
Communication dans un congrès
hal-01679385v1
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Fast Inference of Individual Admixture Coefficients Using Geographic Data
Kevin Caye
,
Flora Jay
,
Olivier J.J. Michel
,
Olivier François
Article dans une revue
hal-01676712v1
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Anisotropic Isolation by Distance: The Main Orientations of Human Genetic Differentiation.
Flora Jay
,
Per Sjödin
,
Mattias Jakobsson
,
Michael G B Blum
Article dans une revue
hal-00775881v1
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Estimation de tailles efficaces variables dans le temps à partir de données génomiques actuelles
Flora Jay
,
Simon S. Boitard
Réseau Ressources Génétiques Animales - Taille efficace et dépression de consanguinité : variables essentielles de biodiversité pour la gestion des populations domestiques et sauvages , May 2016, Paris, France
Communication dans un congrès
hal-02793211v1
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