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Filipe Borges

Journal articles18 documents

  • Nicolas Butel, Agnès Yu, Ivan Le Masson, Filipe Borges, Taline Elmayan, et al.. Contrasting epigenetic control of transgenes and endogenous genes promotes post-transcriptional transgene silencing in Arabidopsis. Nature Communications, Nature Publishing Group, 2021, 12 (1), pp.1-12. ⟨10.1038/s41467-021-22995-3⟩. ⟨hal-03318287⟩
  • Filipe Borges, Mark T.A. Donoghue, Chantal Leblanc, Emily Wear, Milos Tanurdžić, et al.. Loss of Small-RNA-Directed DNA Methylation in the Plant Cell Cycle Promotes Germline Reprogramming and Somaclonal Variation. Current Biology - CB, Elsevier, 2021, 31 (3), pp.591-600. ⟨10.1016/j.cub.2020.10.098⟩. ⟨hal-03332098⟩
  • Souraya Khouider, Filipe Borges, Chantal Leblanc, Alexander Ungru, Arp Schnittger, et al.. Male fertility in Arabidopsis requires active DNA demethylation of genes that control pollen tube function. Nature Communications, Nature Publishing Group, 2021, 12 (1), ⟨10.1038/s41467-020-20606-1⟩. ⟨hal-03113753⟩
  • Daniela Cordeiro, Miguel Rito, Filipe Borges, Jorge Canhoto, Sandra Correia. Selection and validation of reference genes for qPCR analysis of miRNAs and their targets during somatic embryogenesis in tamarillo (Solanum betaceum Cav.). Plant Cell, Tissue and Organ Culture, Springer Verlag, 2020, 143 (1), pp.109-120. ⟨10.1007/s11240-020-01901-7⟩. ⟨hal-03157305⟩
  • Zhenxing Wang, Nicolas Butel, Juan Santos-González, Filipe Borges, Jun Yi, et al.. Polymerase IV Plays a Crucial Role in Pollen Development in Capsella. The Plant cell, American Society of Plant Biologists (ASPB), 2020, 32 (4), pp.950-966. ⟨10.1105/tpc.19.00938⟩. ⟨hal-02935298⟩
  • Filipe Borges, Jean-Sébastien Parent, Frédéric van Ex, Philip Wolff, German Martinez, et al.. Transposon-derived small RNAs triggered by miR845 mediate genome dosage response in Arabidopsis. Nature Genetics, Nature Publishing Group, 2018, 50 (2), pp.186-192. ⟨10.1038/s41588-017-0032-5⟩. ⟨hal-02625249⟩
  • Charles J. Underwood, Kyuha Choi, Christophe Lambing, Xiaohui Zhao, Heïdi Serra, et al.. Epigenetic activation of meiotic recombination near Arabidopsis thaliana centromeres via loss of H3K9me2 and non-CG DNA methylation. Genome Research, Cold Spring Harbor Laboratory Press, 2018, 28 (4), pp.519-531. ⟨10.1101/gr.227116.117⟩. ⟨hal-02624267⟩
  • Filipe Borges, Robert A. Martienssen. The expanding world of small RNAs in plants. Nature Reviews Molecular Cell Biology, Nature Publishing Group, 2015, 16 (12), pp.727-741. ⟨10.1038/nrm4085⟩. ⟨hal-02641568⟩
  • Kate M. Creasey, Jixian Zhai, Filipe Borges, Frédéric van Ex, Michael Regulski, et al.. miRNAs trigger widespread epigenetically activated siRNAs from transposons in Arabidopsis. Nature, Nature Publishing Group, 2014, 508 (7496), pp.411-415. ⟨10.1038/nature13069⟩. ⟨hal-02638598⟩
  • Jörg D. Becker, Seiji Takeda, Filipe Borges, Liam Dolan, José A. Feijó. Transcriptional profiling of Arabidopsis root hairs and pollen defines an apical cell growth signature. BMC Plant Biology, BioMed Central, 2014, 14, pp.1-14. ⟨10.1186/s12870-014-0197-3⟩. ⟨hal-02639633⟩
  • Filipe Borges, Robert A. Martienssen. Establishing epigenetic variation during genome reprogramming. RNA Biology, Taylor & Francis, 2013, 10 (4), pp.490. ⟨10.4161/rna.24085⟩. ⟨hal-02646292⟩
  • Filipe Borges, Rui Gardner, Telma Lopes, Joseph P. Calarco, Leonor C. Boavida, et al.. FACS-based purification of Arabidopsis microspores, sperm cells and vegetative nuclei. Plant Methods, BioMed Central, 2012, 8 (1), pp.1-8. ⟨10.1186/1746-4811-8-44⟩. ⟨hal-02649137⟩
  • Joseph P. Calarco, Filipe Borges, Mark T. A. Donoghue, Frédéric van Ex, Pauline E. Jullien, et al.. Reprogramming of DNA methylation in pollen guides epigenetic inheritance via small RNA. Cell, Elsevier, 2012, 151 (1), pp.194-205. ⟨10.1016/j.cell.2012.09.001⟩. ⟨hal-02652232⟩
  • Leonor C. Boavida, Filipe Borges, Jörg D. Becker, José A. Feijó. Whole genome analysis of gene expression reveals coordinated activation of signaling and metabolic pathways during pollen-pistil interactions in Arabidopsis. Plant Physiology, American Society of Plant Biologists, 2011, 155 (4), pp.2066-2080. ⟨10.1104/pp.110.169813⟩. ⟨hal-02646294⟩
  • Erwan Michard, Pedro T. Lima, Filipe Borges, Ana Catarina Silva, Maria Teresa Portes, et al.. Glutamate receptor-like genes form Ca2+ channels in pollen tubes and are regulated by pistil D-serine. Science, American Association for the Advancement of Science, 2011, 332 (6028), pp.434-437. ⟨10.1126/science.1201101⟩. ⟨hal-02649951⟩
  • Filipe Borges, Patrícia A. Pereira, R. Keith Slotkin, Robert A. Martienssen, Jörg D. Becker. MicroRNA activity in the Arabidopsis male germline. Journal of Experimental Botany, Oxford University Press (OUP), 2011, 62 (5), pp.1611-1619. ⟨10.1093/jxb/erq452⟩. ⟨hal-02652234⟩
  • R. Keith Slotkin, Matthew Vaughn, Filipe Borges, Milos Tanurdzic, Jörg D. Becker, et al.. Epigenetic reprogramming and small RNA silencing of transposable elements in pollen. Cell, Elsevier, 2009, 136 (3), pp.461-472. ⟨10.1016/j.cell.2008.12.038⟩. ⟨hal-02666128⟩
  • Filipe de Sousa Borges, Gabriela Gomes, Rui Gardner, Nuno Moreno, Sheila Mccormick, et al.. Comparative transcriptomics of Arabidopsis sperm cells. Plant Physiology, American Society of Plant Biologists, 2008, 148 (2), pp.1168. ⟨10.1104/pp.108.125229⟩. ⟨hal-02660167⟩

Book sections1 document

Preprints, Working Papers, ...1 document

  • Jonathan Huc, Katarzyna Dziasek, Kannan Pachamuthu, Tristan Woh, Claudia Köhler, et al.. Chemically-induced epimutagenesis allows bypassing reproductive barriers in hybrid seeds. 2021. ⟨hal-03295512v2⟩

Theses1 document

  • Filipe de Sousa Borges. Genetic and epigenetic control of germline specification in Arabidopsis pollen. Life Sciences [q-bio]. 2012. English. ⟨tel-02811426⟩