Fabien Crauste

Documents

Présentation

Publications

	Stochastic modeling of a gene regulatory network driving B cell development in germinal centers Alexey Koshkin , Ulysse Herbach , María Rodríguez Martínez , Olivier Gandrillon , Fabien Crauste PLoS ONE, 2024, 19 (3), pp.e0301022. ⟨10.1371/journal.pone.0301022⟩ Article dans une revue hal-04490302v3
	CD8 memory precursor cell generation is a continuous process Helena Todorov , Margaux Prieux , Daphne Laubreton , Matteo Bouvier , Shaoying Wang iScience, 2022, 25 (9), pp.104927. ⟨10.1016/j.isci.2022.104927⟩ Article dans une revue hal-03842898v1
	Multiscale Modeling of Germinal Center Recapitulates the Temporal Transition From Memory B Cells to Plasma Cells Differentiation as Regulated by Antigen Affinity-Based Tfh Cell Help Elena Merino Tejero , Danial Lashgari , Rodrigo García-Valiente , Xuefeng Gao , Fabien Crauste Frontiers in Immunology, 2021, 11, ⟨10.3389/fimmu.2020.620716⟩ Article dans une revue hal-03153711v1
	Modeling and characterization of inter-individual variability in CD8 T cell responses in mice Chloe Audebert , Daphné Laubreton , Christophe Arpin , Olivier Gandrillon , Jacqueline Marvel In Silico Biology, 2021, 14 (1-2), pp.13-39. ⟨10.3233/ISB-200205⟩ Article dans une revue hal-03136073v1
	Practical identifiability in the frame of nonlinear mixed effects models: the example of the in vitro erythropoiesis Ronan Duchesne , Anissa Guillemin , Olivier Gandrillon , Fabien Crauste BMC Bioinformatics, 2021, pp.1-21. ⟨10.1186/s12859-021-04373-4⟩ Article dans une revue hal-03364480v1
	A model for establishment, maintenance and reactivation of the immune response after vaccination against Ebola virus Irene Balelli , Chloé Pasin , Mélanie Prague , Fabien Crauste , Thierry van Effelterre Journal of Theoretical Biology, 2020, 495, pp.110254. ⟨10.1016/j.jtbi.2020.110254⟩ Article dans une revue hal-03160892v2
	Model-based assessment of the Role of Uneven Partitioning of Molecular Content on Heterogeneity and Regulation of Differentiation in CD8 T-cell Immune Responses Simon Girel , Christophe Arpin , Jacqueline Marvel , Olivier Gandrillon , Fabien Crauste Frontiers in Immunology, inPress, pp.1-41. ⟨10.3389/fimmu.2019.00230⟩ Article dans une revue hal-02008705v1
	Drugs modulating stochastic gene expression affect the erythroid differentiation process Anissa Guillemin , Ronan Duchesne , Fabien Crauste , Sandrine Gonin-Giraud , Olivier Gandrillon PLoS ONE, 2019, 14 (11), pp.1-19. ⟨10.1371/journal.pone.0225166⟩ Article dans une revue hal-02375801v1
	Calibration, Selection and Identifiability Analysis of a Mathematical Model of the in vitro Erythropoiesis in Normal and Perturbed Contexts Ronan Duchesne , Anissa Guillemin , Fabien Crauste , Olivier Gandrillon In Silico Biology, 2019, 13 (1-2), pp.55-69. ⟨10.3233/ISB-190471⟩ Article dans une revue hal-02309925v1
	Oscillations and asymptotic convergence for a delay differential equation modeling platelet production Loïs Boullu , Mostafa Adimy , Fabien Crauste , Laurent Pujo-Menjouet Discrete and Continuous Dynamical Systems - Series B, 2019, 24 (6), pp.2417-2442. ⟨10.3934/dcdsb.2018259⟩ Article dans une revue hal-01835435v2
	A multiscale model of the CD8 T cell immune response structured by intracellular content Loic Barbarroux , Philippe Michel , Mostafa Adimy , Fabien Crauste Discrete and Continuous Dynamical Systems - Series B, 2018, 23 (9), pp.3969-4002. ⟨10.3934/dcdsb.2018120⟩ Article dans une revue hal-01969237v1
	Investigating the role of the experimental protocol in phenylhydrazine-induced anemia on mice recovery Oscar Angulo , Olivier Gandrillon , Fabien Crauste Journal of Theoretical Biology, 2018, 437, pp.286 - 298. ⟨10.1016/j.jtbi.2017.10.031⟩ Article dans une revue hal-01646792v1
	Existence and stability of periodic solutions of an impulsive differential equation and application to CD8 T-cell differentiation Simon Girel , Fabien Crauste Journal of Mathematical Biology, 2018, 76 (7), pp.1765-1795. ⟨10.1007/s00285-018-1220-3⟩ Article dans une revue hal-01721728v1
	Numerical integration of an erythropoiesis model with explicit growth factor dynamics Oscar Angulo , Fabien Crauste , Juan Carlos López-Marcos Journal of Computational and Applied Mathematics, 2018, 330, pp.770 - 782. ⟨10.1016/j.cam.2017.01.033⟩ Article dans une revue hal-01646786v1
	Identification of Nascent Memory CD8 T Cells and Modeling of Their Ontogeny Fabien Crauste , Julien Mafille , Lilia Boucinha , Sophia Djebali , Olivier Gandrillon Cell Systems, 2017, 4 (3), pp.306-317. ⟨10.1016/j.cels.2017.01.014⟩ Article dans une revue hal-01409637v1
	IL-2 sensitivity and exogenous IL-2 concentration gradient tune the productive contact duration of CD8+ T cell-APC: a multiscale modeling study Xuefeng Gao , Christophe Arpin , Jacqueline Marvel , Sotiris A. Prokopiou , Olivier Gandrillon BMC Systems Biology, 2016, 10 (1), pp.77. ⟨10.1186/s12918-016-0323-y⟩ Article dans une revue inserm-01354185v1
	Predicting pathogen-specific CD8 T cell immune responses from a modeling approach. Fabien Crauste , Emmanuelle Terry , I Le Mercier , Julien Mafille , Sophie Djebali Journal of Theoretical Biology, 2015, 374, pp.66-82. ⟨10.1016/j.jtbi.2015.03.033⟩ Article dans une revue hal-00717406v2
	Optimal linear stability condition for scalar differential equations with distributed delay Samuel Bernard , Fabien Crauste Discrete and Continuous Dynamical Systems - Series B, 2015, 20 (7), ⟨10.3934/dcdsb.2015.20.1855⟩ Article dans une revue hal-00997528v1
	A mathematical model of leptin resistance Marine Jacquier , Hédi A. Soula , Fabien Crauste Mathematical Biosciences, 2015, 267, ⟨10.1016/j.mbs.2015.06.008⟩ Article dans une revue hal-01233483v1
	Multiscale Modeling of the Early CD8 T-Cell Immune Response in Lymph Nodes: An Integrative Study Sotiris Prokopiou , Loic Barbarroux , Samuel Bernard , Julien Mafille , Yann Leverrier Computation, 2014, 2 (4), pp.159-181. ⟨10.3390/computation2040159⟩ Article dans une revue hal-01074736v1
	A predictive model of the dynamics of body weight and food intake in rats submitted to caloric restrictions. Marine Jacquier , Fabien Crauste , Christophe Soulage , Hédi A Soula PLoS ONE, 2014, 9 (6), pp.e100073. ⟨10.1371/journal.pone.0100073⟩ Article dans une revue hal-01017357v1
	Delay Differential Equations and Autonomous Oscillations in Hematopoietic Stem Cell Dynamics Modeling Mostafa Adimy , Fabien Crauste Mathematical Modelling of Natural Phenomena, 2012, 7 (6), pp.1-22. ⟨10.1051/mmnp/20127601⟩ Article dans une revue hal-00766339v1
	Mathematical model of the primary CD8 T cell immune response: stability analysis of a nonlinear age-structured system. Emmanuelle Terry , Jacqueline Marvel , Christophe Arpin , Olivier Gandrillon , Fabien Crauste Journal of Mathematical Biology, 2012, 65, pp.263-291. ⟨10.1007/s00285-011-0459-8⟩ Article dans une revue hal-00649219v1
	Modeling erythroblastic islands: using a hybrid model to assess the function of central macrophage. S. Fischer , P. Kurbatova , N. Bessonov , Olivier Gandrillon , Vitaly Volpert Journal of Theoretical Biology, 2012, 298, pp.92-106. ⟨10.1016/j.jtbi.2012.01.002⟩ Article dans une revue hal-00596682v2
	A review on local asymptotic stability analysis for mathematical models of hematopoiesis with delay and delay-dependent coefficients Fabien Crauste Annals of the Tiberiu Popoviciu Seminar of functional equations, approximation and convexity, 2011, 9, pp.121-143 Article dans une revue hal-00750271v1
	Modelling of Plant Growth with Apical or Basal Meristem Nikolai Bessonov , Fabien Crauste , Vitaly Volpert Mathematical Modelling of Natural Phenomena, 2011, 6 (2), pp.107-132. ⟨10.1051/mmnp/20116204⟩ Article dans une revue hal-00649218v1
	HYBRID MODEL OF ERYTHROPOIESIS AND LEUKEMIA TREATMENT WITH CYTOSINE ARABINOSIDE Polina Kurbatova , Samuel Bernard , Nikolai Bessonov , Fabien Crauste , Ivan Demin SIAM Journal on Applied Mathematics, 2011, 71 (6), pp.2246-2268. ⟨10.1137/100815517⟩ Article dans une revue hal-00538496v2
	Application of Hybrid Models to Blood Cell Production in the Bone Marrow Nikolai Bessonov , Fabien Crauste , Stephan Fisher , Polina Kurbatova , Vitaly Volpert Mathematical Modelling of Natural Phenomena, 2011, 6 (7), pp.2-12. ⟨10.1051/mmnp/20116701⟩ Article dans une revue hal-00649217v1
	Mathematical study of feedback control roles and relevance in stress erythropoiesis Fabien Crauste , Ivan Demin , Olivier Gandrillon , Vitaly Volpert Journal of Theoretical Biology, 2010, 263 (3), pp.303. ⟨10.1016/j.jtbi.2009.12.026⟩ Article dans une revue hal-00567288v1
	Stability and Hopf bifurcation for a cell population model with state-dependent delay Mostafa Adimy , Fabien Crauste , Hassan Hbid , Redouane Qesmi SIAM Journal on Applied Mathematics, 2010, 70 (5), pp.1611-1633. ⟨10.1137/080742713⟩ Article dans une revue hal-00542655v1
	Asymptotic behavior and stability switch for a mature-immature model of cell differentiation Mostafa Adimy , Fabien Crauste , Catherine Marquet Nonlinear Analysis: Real World Applications, 2010, 11 (4), pp.2913-2929. ⟨10.1016/j.nonrwa.2009.11.001⟩ Article dans une revue hal-00542644v1
	Boundedness and Lyapunov Function for a Nonlinear System of Hematopoietic Stem Cell Dynamics Mostafa Adimy , Fabien Crauste , Abderrahim El Abdllaoui Comptes Rendus. Mathématique, 2010, 348 (7-8), pp.373-377. ⟨10.1016/j.crma.2010.02.018⟩ Article dans une revue hal-00542477v1
	Mathematical study of feedback control roles and relevance in stress erythropoiesis. Fabien Crauste , Ivan Demin , Olivier Gandrillon , Vitaly Volpert Journal of Theoretical Biology, 2010, 263 (3), pp.303-16. ⟨10.1016/j.jtbi.2009.12.026⟩ Article dans une revue hal-00542457v1
	A multi-scale model of erythropoiesis Ivan Demin , Fabien Crauste , Olivier Gandrillon , Vitaly Volpert Journal of Biological Dynamics, 2010, 4 (1), pp.59-70. ⟨10.1080/17513750902777642⟩ Article dans une revue hal-00542669v1
	Mathematical model of hematopoiesis dynamics with growth factor-dependent apoptosis and proliferation regulation Fabien Crauste , Mostafa Adimy Mathematical and Computer Modelling, 2009, 49, pp.2128-2137. ⟨10.1016/j.mcm.2008.07.014⟩ Article dans une revue hal-00542665v1
	Delay Model of Hematopoietic Stem Cell Dynamics: Asymptotic Stability and Stability Switch Fabien Crauste Mathematical Modelling of Natural Phenomena, 2009, 4 (2), pp.28-47. ⟨10.1051/mmnp/20094202⟩ Article dans une revue hal-00542663v1
	Dynamics of erythroid progenitors and erythroleukemia Nikolai Bessonov , Fabien Crauste , Ivan Demin , Vitaly Volpert Mathematical Modelling of Natural Phenomena, 2009, Cancer modelling (Part 2), 4 (3), pp.210-232. ⟨10.1051/mmnp/20094309⟩ Article dans une revue hal-00542660v1
	Discrete maturity-structured model of cell differentiation with applications to acute myelogenous leukemia Mostafa Adimy , Fabien Crauste , Abderrahim El Abdllaoui Journal of Biological Systems, 2008, 16 (3), pp.395-424. ⟨10.1142/S0218339008002599⟩ Article dans une revue hal-00750276v1
	Modélisation de la dynamique de l'hématopoïèse normale et pathologique Mostafa Adimy , Samuel Bernard , Jean Clairambault , Fabien Crauste , Stéphane Génieys Hématologie, 2008, 14 (5), pp.339-350. ⟨10.1684/hma.2008.0282⟩ Article dans une revue hal-00750278v1
	Numerical integration of a mathematical model of hematopoietic stem cell dynamics Mostafa Adimy , Oscar Angulo , Fabien Crauste , Juan Carlos Lopez-Marcos Computers & Mathematics with Applications, 2008, 56, pp.594-606. ⟨10.1016/j.camwa.2008.01.003⟩ Article dans une revue hal-00750283v1
	A delay reaction-diffusion model of the dynamics of botulinum in fish. Fabien Crauste , M Lhassan Hbid , Abdelaziz Kacha Mathematical Biosciences, 2008, 216 (1), pp.17-29. ⟨10.1016/j.mbs.2008.07.012⟩ Article dans une revue hal-00542466v1
	Adding self-renewal in committed erythroid progenitors improves the biological relevance of a mathematical model of erythropoiesis. Fabien Crauste , Laurent Pujo-Menjouet , Stéphane Génieys , Clément Molina , Olivier Gandrillon Journal of Theoretical Biology, 2008, 250, pp.322-338. ⟨10.1016/j.jtbi.2007.09.041⟩ Article dans une revue hal-00194422v1
	Modelling and Asymptotic Stability of a Growth Factor-Dependent Stem Cells Dynamics Model with Distributed Delay Mostafa Adimy , Fabien Crauste Discrete and Continuous Dynamical Systems - Series B, 2007, 8 (1), pp.19-38. ⟨10.3934/dcdsb.2007.8.19⟩ Article dans une revue hal-00258392v1
	Asymptotic Behavior of a Discrete Maturity Structured System of Hematopoietic Stem Cells Dynamics with Several Delays Mostafa Adimy , Fabien Crauste , Abderrahim El Abdllaoui Mathematical Modelling of Natural Phenomena, 2006, 1 (2), pp.1-22. ⟨10.1051/mmnp:2008001⟩ Article dans une revue hal-00750285v1
	Modelling hematopoiesis mediated by growth factors with applications to periodic hematological diseases Mostafa Adimy , Fabien Crauste , Shigui Ruan Bulletin of Mathematical Biology, 2006, 68 (8), pp.2321-2351. ⟨10.1007/s11538-006-9121-9⟩ Article dans une revue hal-00376087v1
	Periodic Oscillations in Leukopoiesis Models with Two Delays Mostafa Adimy , Fabien Crauste , Shigui Ruan Journal of Theoretical Biology, 2006, 242, pp.288-299. ⟨10.1016/j.jtbi.2006.02.020⟩ Article dans une revue hal-00258393v1
	Global Asymptotic Stability and Hopf Bifurcation for a Blood Cell Production Model Fabien Crauste Mathematical Biosciences and Engineering, 2006, 3 (2), pp.325-346 Article dans une revue hal-00376070v2
	Stability of limit cycles in a pluripotent stem cell dynamics model Mostafa Adimy , Fabien Crauste , Andrei Halanay , Mihaela Neamtu , Dumitru Opris Chaos, Solitons & Fractals, 2006, 27 (4), pp.1091-1107. ⟨10.1016/j.chaos.2005.04.083⟩ Article dans une revue hal-00376002v1
	On the stability of a maturity structured model of cellular proliferation Mostafa Adimy , Fabien Crauste , Laurent Pujo-Menjouet Discrete and Continuous Dynamical Systems - Series A, 2005, 12 (3), pp.501-522. ⟨10.3934/dcds.2005.12.501⟩ Article dans une revue hal-00375940v1
	Stability and Hopf bifurcation in a mathematical model of pluripotent stem cell dynamics Mostafa Adimy , Fabien Crauste , Shigui Ruan Nonlinear Analysis: Real World Applications, 2005, 6 (4), pp.651-670. ⟨10.1016/j.nonrwa.2004.12.010⟩ Article dans une revue hal-00375966v1
	Existence, positivity and stability for a nonlinear model of cellular proliferation Mostafa Adimy , Fabien Crauste Nonlinear Analysis: Real World Applications, 2005, 6 (2), pp.337-366. ⟨10.1016/j.nonrwa.2004.09.001⟩ Article dans une revue hal-00375934v1
	A mathematical study of the hematopoiesis process with applications to chronic myelogenous leukemia Mostafa Adimy , Fabien Crauste , Shigui Ruan SIAM Journal on Applied Mathematics, 2005, 65 (4), pp.1328-1352. ⟨10.1137/040604698⟩ Article dans une revue hal-00375977v1
	Global stability of a partial differential equation with distributed delay due to cellular replication Mostafa Adimy , Fabien Crauste Nonlinear Analysis: Theory, Methods and Applications, 2003, 54 (8), pp.1469-1491. ⟨10.1016/S0362-546X(03)00197-4⟩ Article dans une revue hal-00375926v1
	Un modèle non-linéaire de prolifération cellulaire : extinction des cellules et invariance Mostafa Adimy , Fabien Crauste Comptes Rendus. Mathématique, 2003, 336 (7), pp.559-564. ⟨10.1016/S1631-073X(03)00125-0⟩ Article dans une revue hal-00375916v1

	In Silico Methods for Studying T Cell Biology Katherine Grzesik , Kevin Eng , Fabien Crauste , Sebastiano Battaglia Int. Rev. Cell. Mol. Biol. 342, Elsevier, pp.265-304, 2019, ⟨10.1016/bs.ircmb.2018.07.005⟩ Chapitre d'ouvrage hal-02237891v1
	Stability and Hopf bifurcation for a first-order linear delay differential equation with distributed delay Fabien Crauste Complex Time Delay Systems (Ed. F. Atay), Springer, pp.320, 2010, ⟨10.1007/978-3-642-02329-3_8⟩ Chapitre d'ouvrage hal-00542651v1

	In silico modelling of CD8 T cell immune response links genetic regulation to population dynamics Thi Nhu Thao Nguyen , Madge Martin , C Arpin , Samuel Bernard , Olivier Gandrillon 2024 Pré-publication, Document de travail hal-04489553v1

	Etude mathématique d'équations aux dérivées partielles hyperboliques modélisant les processus de régulation des cellules sanguines - Applications aux maladies hématologiques cycliques Fabien Crauste Mathématiques [math]. Université de Pau et des Pays de l'Adour, 2005. Français. ⟨NNT : ⟩ Thèse tel-00009632v1

	Equations à Retard et Modèles de Dynamiques de Populations Cellulaires Fabien Crauste Mathématiques générales [math.GM]. Université Claude Bernard Lyon 1, 2014 HDR tel-01092352v1

Fabien Crauste

Présentation

Publications

Stochastic modeling of a gene regulatory network driving B cell development in germinal centers

CD8 memory precursor cell generation is a continuous process

Multiscale Modeling of Germinal Center Recapitulates the Temporal Transition From Memory B Cells to Plasma Cells Differentiation as Regulated by Antigen Affinity-Based Tfh Cell Help

Modeling and characterization of inter-individual variability in CD8 T cell responses in mice

Practical identifiability in the frame of nonlinear mixed effects models: the example of the in vitro erythropoiesis

A model for establishment, maintenance and reactivation of the immune response after vaccination against Ebola virus

Model-based assessment of the Role of Uneven Partitioning of Molecular Content on Heterogeneity and Regulation of Differentiation in CD8 T-cell Immune Responses

Drugs modulating stochastic gene expression affect the erythroid differentiation process

Calibration, Selection and Identifiability Analysis of a Mathematical Model of the in vitro Erythropoiesis in Normal and Perturbed Contexts

Oscillations and asymptotic convergence for a delay differential equation modeling platelet production

A multiscale model of the CD8 T cell immune response structured by intracellular content

Investigating the role of the experimental protocol in phenylhydrazine-induced anemia on mice recovery

Existence and stability of periodic solutions of an impulsive differential equation and application to CD8 T-cell differentiation

Numerical integration of an erythropoiesis model with explicit growth factor dynamics

Identification of Nascent Memory CD8 T Cells and Modeling of Their Ontogeny

IL-2 sensitivity and exogenous IL-2 concentration gradient tune the productive contact duration of CD8+ T cell-APC: a multiscale modeling study

Predicting pathogen-specific CD8 T cell immune responses from a modeling approach.

Optimal linear stability condition for scalar differential equations with distributed delay

A mathematical model of leptin resistance

Multiscale Modeling of the Early CD8 T-Cell Immune Response in Lymph Nodes: An Integrative Study

A predictive model of the dynamics of body weight and food intake in rats submitted to caloric restrictions.

Delay Differential Equations and Autonomous Oscillations in Hematopoietic Stem Cell Dynamics Modeling

Mathematical model of the primary CD8 T cell immune response: stability analysis of a nonlinear age-structured system.

Modeling erythroblastic islands: using a hybrid model to assess the function of central macrophage.

A review on local asymptotic stability analysis for mathematical models of hematopoiesis with delay and delay-dependent coefficients

Modelling of Plant Growth with Apical or Basal Meristem

HYBRID MODEL OF ERYTHROPOIESIS AND LEUKEMIA TREATMENT WITH CYTOSINE ARABINOSIDE

Application of Hybrid Models to Blood Cell Production in the Bone Marrow

Mathematical study of feedback control roles and relevance in stress erythropoiesis

Stability and Hopf bifurcation for a cell population model with state-dependent delay

Asymptotic behavior and stability switch for a mature-immature model of cell differentiation

Boundedness and Lyapunov Function for a Nonlinear System of Hematopoietic Stem Cell Dynamics

Mathematical study of feedback control roles and relevance in stress erythropoiesis.

A multi-scale model of erythropoiesis

Mathematical model of hematopoiesis dynamics with growth factor-dependent apoptosis and proliferation regulation

Delay Model of Hematopoietic Stem Cell Dynamics: Asymptotic Stability and Stability Switch

Dynamics of erythroid progenitors and erythroleukemia

Discrete maturity-structured model of cell differentiation with applications to acute myelogenous leukemia

Modélisation de la dynamique de l'hématopoïèse normale et pathologique

Numerical integration of a mathematical model of hematopoietic stem cell dynamics

A delay reaction-diffusion model of the dynamics of botulinum in fish.

Adding self-renewal in committed erythroid progenitors improves the biological relevance of a mathematical model of erythropoiesis.

Modelling and Asymptotic Stability of a Growth Factor-Dependent Stem Cells Dynamics Model with Distributed Delay

Asymptotic Behavior of a Discrete Maturity Structured System of Hematopoietic Stem Cells Dynamics with Several Delays

Modelling hematopoiesis mediated by growth factors with applications to periodic hematological diseases

Periodic Oscillations in Leukopoiesis Models with Two Delays

Global Asymptotic Stability and Hopf Bifurcation for a Blood Cell Production Model

Stability of limit cycles in a pluripotent stem cell dynamics model

On the stability of a maturity structured model of cellular proliferation

Stability and Hopf bifurcation in a mathematical model of pluripotent stem cell dynamics

Existence, positivity and stability for a nonlinear model of cellular proliferation

A mathematical study of the hematopoiesis process with applications to chronic myelogenous leukemia

Global stability of a partial differential equation with distributed delay due to cellular replication

Un modèle non-linéaire de prolifération cellulaire : extinction des cellules et invariance

In Silico Methods for Studying T Cell Biology

Stability and Hopf bifurcation for a first-order linear delay differential equation with distributed delay

In silico modelling of CD8 T cell immune response links genetic regulation to population dynamics

Etude mathématique d'équations aux dérivées partielles hyperboliques modélisant les processus de régulation des cellules sanguines - Applications aux maladies hématologiques cycliques

Equations à Retard et Modèles de Dynamiques de Populations Cellulaires