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High similarity between flanking regions of different microsatellites detected within each of two species of Lepidoptera

 Emese Meglécz , Frederic Petenian , Etienne Danchin , Armelle Coeur d'Acier , Jean-Yves Rasplus , et al.
Molecular Ecology, 2004, 13 (6), pp.1693-1700. ⟨10.1111/j.1365-294X.2004.02163.x⟩
Article dans une revue istex hal-02678374v1
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Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing

 Jean-Francois Martin , Nicolas Pech , Emese Meglécz , Stéphanie Ferreira , Caroline Costedoat , et al.
BMC Genomics, 2010, 11, pp.560. ⟨10.1186/1471-2164-11-560⟩
Article dans une revue hal-02663878v1
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Une étude inédite de métabarcoding pour étudier le régime alimentaire de l’apron

 Gaït Archambaud‐suard , Emmanuel Corse , Emese Meglécz , Rémi Chappaz , Vincent Dubut
Sciences Eaux & Territoires, 2019, (Cahier spécial IV), pp.12-19. ⟨10.14758/set-revue.2019.cs4.03⟩
Article dans une revue hal-02462400v1
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One‐locus‐several‐primers: A strategy to improve the taxonomic and haplotypic coverage in diet metabarcoding studies

 Emmanuel Corse , Christelle Tougard , Gaït Archambaud‐suard , Jean‐françois Agnèse , Françoise Messu Mandeng , et al.
Ecology and Evolution, 2019, 9 (8), pp.4603-4620. ⟨10.1002/ece3.5063⟩
Article dans une revue hal-02109732v1
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Challenges of microsatellite development in Lepidoptera: Euphydryas aurinia (Nymphalidae) as a case study

 Melthide Sinama , Vincent Dubut , Caroline Costedoat , André Gilles , M. Junker , et al.
European Journal of Entomology, 2011, 108 (108), pp.261-266
Article dans une revue hal-01294296v1
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Biodiversité épiphyte des feuilles de posidonie et bioconcentration de contaminants : suivi pluriannuel des herbiers de Fos, Marseille et Toulon

 Noëlle Sarkis , Cédric Amadéi , Hugo Amella , Bernard Angeletti , Cécile Chemin , et al.
Dix ans de recherches de l'Observatoire Hommes-Milieux Littoral méditerranéen sur le Littoral marseillais, OHM Littoral méditerranéen; ESPACE UMR 7300, Jun 2023, Marseille (13), France
Communication dans un congrès hal-04141983v1

COInr a comprehensive, non-redundant COI database from NCBI-nt and BOLD

 Emese Meglecz
2023, ⟨10.5281/zenodo.6555984⟩
Autre publication scientifique hal-04465834v1
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Cross-species amplification of 41 microsatellites in European cyprinids: a tool for evolutionary,population genetics and hybridization studies

 Vincent Dubut , Melthide Sinama , Jean-Francois Martin , Emese Meglécz , Juliette Fernandez , et al.
BMC Research Notes, 2010, 3, pp.135. ⟨10.1186/1756-0500-3-135⟩
Article dans une revue hal-02658325v1

Isolation and characterization of polymorphic microsatellites in Parnassius Apollo and Euphydryas aurinia (Lepidoptera)

 Frédéric Petenian , Emese Meglécz , Guénaëlle Genson , Jean Yves Rasplus , Eric Faure
Molecular Ecology Notes, 2005, 5 (2), pp.243-245. ⟨10.1111/j.1471-8286.2005.00891.x⟩
Article dans une revue istex hal-02680714v1
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VTAM: A robust pipeline for validating metabarcoding data using controls

 Aitor González , Vincent Dubut , Emmanuel Corse , Reda Mekdad , Thomas Dechatre , et al.
Computational and Structural Biotechnology Journal, 2023, 21, pp.1151 - 1156. ⟨10.1016/j.csbj.2023.01.034⟩
Article dans une revue hal-03978642v1
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DNA metabarcoding suggests adaptive seasonal variation of individual trophic traits in a critically endangered fish

 Kurt Villsen , Emmanuel Corse , Emese Meglécz , Gaït Archambaud-Suard , Hélène Vignes , et al.
Molecular Ecology, 2022, 31 (22), pp.5889-5908. ⟨10.1111/mec.16698⟩
Article dans une revue hal-03793011v1
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Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies

 Francesco Mugnai , Federica Costantini , Anne Chenuil , Michèle Leduc , José Miguel Gutiérrez Ortega , et al.
PeerJ, 2023, 11, pp.e14616. ⟨10.7717/peerj.14616⟩
Article dans une revue hal-03931396v1
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COInr and mkCOInr: Building and customizing a non-redundant barcoding reference database from BOLD and NCBI using a lightweight pipeline

 Emese Meglécz
2022
Pré-publication, Document de travail hal-03889248v1
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COInr and mkCOInr : Building and customizing a nonredundant barcoding reference database from BOLD and NCBI using a semi‐automated pipeline

 Emese Meglécz
Molecular Ecology Resources, 2023, 23 (4), pp.933-945. ⟨10.1111/1755-0998.13756⟩
Article dans une revue hal-04010871v1
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Scientific history, biogeography, and biological traits predict presence of cryptic or overlooked species

 Abigail E Cahill , Emese Meglécz , Anne Chenuil
Biological Reviews, In press, ⟨10.1111/brv.13034⟩
Article dans une revue hal-04327610v1
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mkLTG: a command-line tool for taxonomic assignment of metabarcoding sequences using variable identity thresholds

 Emese Meglécz
Biologia Futura, In press, ⟨10.1007/s42977-024-00201-x⟩
Article dans une revue hal-04434060v1
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A shot in the genome: how accurately do shotgun 454 sequences represent a genome?

 Emese Meglécz , Nicolas Pech , André Gilles , Jean-François Martin , Michael G Gardner
BMC Research Notes, 2012, 5 (1), pp.259. ⟨10.1186/1756-0500-5-259⟩
Article dans une revue hal-02356481v1
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Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing

 André Gilles , Emese Meglécz , Nicolas Pech , Stéphanie Ferreira , Thibaut Malausa , et al.
BMC Genomics, 2011, 12 (1), ⟨10.1186/1471-2164-12-245⟩
Article dans une revue hal-01995051v1
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A from-benchtop-to-desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies

 Emmanuel Corse , Emese Meglecz , Gait Archambaud , Morgane Ardisson , Jean-François Martin , et al.
Molecular Ecology Resources, 2017, 17 (6), pp.e146-e159. ⟨10.1111/1755-0998.12703⟩
Article dans une revue hal-01681595v1
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Microsatellite flanking region similarities among different loci within insect species

 E. Meglecz , S.J. Anderson , Denis D. Bourguet , R. Butcher , A. Caldas , et al.
Insect Molecular Biology, 2007, 16 (2), pp.175-185. ⟨10.1111/j.1365-2583.2006.00713.x⟩
Article dans une revue istex hal-02664785v1
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Breakdown of Phylogenetic Signal: A Survey of Microsatellite Densities in 454 Shotgun Sequences from 154 Non Model Eukaryote Species

 Emese Meglécz , Gabriel Nève , Ed Biffin , Michael G Gardner
PLoS ONE, 2012, 7 (7), ⟨10.1371/journal.pone.0040861⟩
Article dans une revue hal-01794109v1
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High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries

 Thibaut Malausa , André Gilles , Emese Meglécz , Hélène Blancard , Stéphanie Duthoy , et al.
Molecular Ecology Resources, 2011, 11 (4), pp.638-644. ⟨10.1111/j.1755-0998.2011.02992.x⟩
Article dans une revue hal-01506135v1
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SESAME (SEquence Sorter & AMplicon Explorer): genotyping based on high-throughput multiplex amplicon sequencing

 Emese Meglécz , Sylvain Piry , Erick Desmarais , Maxime Galan , André Gilles , et al.
Bioinformatics, 2011, 27 (2), pp.277-278. ⟨10.1093/bioinformatics/btq641⟩
Article dans une revue hal-02356496v1
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VTAM: A robust pipeline for validating metabarcoding data using internal controls

 Aitor Gonzalez , Vincent Dubut , Emmanuel Corse , Reda Mekdad , Thomas Dechatre , et al.
2021
Pré-publication, Document de travail hal-03144831v1
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QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects

 Emese Meglécz , Caroline Costedoat , Vincent Dubut , André Gilles , Thibaut Malausa , et al.
Bioinformatics, 2010, 26 (3), pp.403-404. ⟨10.1093/bioinformatics/btp670⟩
Article dans une revue hal-02667917v1
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mkCOInr

 Emese Meglécz
2022, ⟨swh:1:dir:1126677ae7043944d3f5d6915234baac6c32ae17;origin=https://hal.archives-ouvertes.fr/hal-04463186;visit=swh:1:snp:32c941dc891586dc74a146d15d58264e3aed6414;anchor=swh:1:rel:f58d9b6528cf878462fc442f4ea9a9ee5856c101;path=/⟩
Logiciel hal-04463186v1
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mkLTG

 Emese Meglécz
2023, ⟨swh:1:dir:379e1cb80153d991dba5a7d8b9372ce92605b3bf;origin=https://hal.archives-ouvertes.fr/hal-04463220;visit=swh:1:snp:c6e4e5237f78381ca07824633db2497189a2be1b;anchor=swh:1:rel:0bec3b58ae69b45286c54a2172d080b7907470d9;path=/⟩
Logiciel hal-04463220v1
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Genetic diversity of the submerged macrophyte Ceratophyllum demersum depends on habitat hydrology and habitat fragmentation

 Attila I Engloner , Kitti Németh , Péter B Kós , Emese Meglécz , Judit Bereczki
Frontiers in Plant Science, 2023, 14, pp.1277916. ⟨10.3389/fpls.2023.1277916⟩
Article dans une revue hal-04281566v1
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Isolation and characterization of 15 SSR loci for the endangered European tetraploid species Gladiolus palustris (Iridaceae)

 Tamás Malkócs , Shyryn Almerekova , Judit Bereczki , Judit Cservenka , Emese Meglécz , et al.
Applications in Plant Sciences, 2019, 7 (5), pp.e01245. ⟨10.1002/aps3.1245⟩
Article dans une revue hal-02129204v1

QDD version 3.1: a user-friendly computer program for microsatellite selection and primer design revisited: experimental validation of variables determining genotyping success rate

 Emese Meglécz , Nicolas Pech , André Gilles , Vincent Dubut , Pascal Hingamp , et al.
Molecular Ecology Resources, 2014, 14 (6), pp.1302-1313. ⟨10.1111/1755-0998.12271⟩
Article dans une revue istex hal-02356473v1
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