Elisabeth Herniou

Robert D Pienaar, Clément Gilbert, Carole Belliardo, Salvador Herrero, Elisabeth A. Herniou. First Evidence of Past and Present Interactions between Viruses and the Black Soldier Fly, Hermetia illucens. Viruses, MDPI, 2022, Viruses in Mass-Reared Invertebrates, 14 (6), pp.1274. ⟨10.3390/v14061274⟩. ⟨hal-03694316⟩

Vincent Loiseau, Jean Peccoud, Clémence Bouzar, Sandra Guillier, Jiangbin Fan, et al.. Monitoring Insect Transposable Elements in Large Double-Stranded DNA Viruses Reveals Host-to-Virus and Virus-to-Virus Transposition. Molecular Biology and Evolution, Oxford University Press (OUP), 2021, 38 (9), pp.3512-3530. ⟨10.1093/molbev/msab198⟩. ⟨hal-03376529⟩

Jérémy Gauthier, Hélène Boulain, Joke J F A van Vugt, Lyam Baudry, Emma Persyn, et al.. Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization. Communications Biology, Nature Publishing Group, 2021, 4 (1), pp.1-15. ⟨10.1038/s42003-020-01623-8⟩. ⟨hal-03127732⟩

Robert Harrison, Elisabeth A. Herniou, Annie Bézier, Johannes Jehle, John Burand, et al.. No title. Journal of General Virology, Microbiology Society, 2020, 101 (1), pp.3-4. ⟨10.1099/jgv.0.001381⟩. ⟨hal-03009557⟩

Anne Dalmon, Philippe Gayral, Damien Decante, Christophe C. Klopp, D. Bigot, et al.. Vespa Velutina - Les virus du frelon, une menace ou un espoir ?. La Santé de l'Abeille, Fédération Nationale des Organisations Sanitaires Apicoles Départementale, 2020, pp.141-145. ⟨hal-03113994⟩

Vincent Loiseau, Elisabeth A. Herniou, yannis Moreau, Nicolas Lévêque, Carine Meignin, et al.. Wide spectrum and high frequency of genomic structural variation, including transposable elements, in large double-stranded DNA viruses. Virus Evolution, Oxford University Press, 2020, 6 (1), pp.vez060. ⟨10.1093/ve/vez060⟩. ⟨hal-02456571⟩

Sa yang, Philippe Gayral, Hongxia Zhao, yaojun Wu, Xuejian Jiang, et al.. Occurrence and Molecular Phylogeny of Honey Bee Viruses in Vespids. Viruses, MDPI, 2020, 12 (1), pp.6. ⟨10.3390/v12010006⟩. ⟨hal-02794326⟩

Anne Dalmon, Philippe Gayral, Damien Decante, Christophe C. Klopp, Diane Bigot, et al.. Viruses in the Invasive Hornet Vespa velutina. Viruses, MDPI, 2019, 11 (11), pp.1041. ⟨10.3390/v11111041⟩. ⟨hal-02388796⟩

Lucas Sire, Paul Schmidt yanes, Rodolphe Rougerie, Christophe Bouget, Laurent Larrieu, et al.. Understanding the impacts of widespread forest die-offs across France, Germany, and China. Barcode Bulletin , International Barcode of Life, 2019, 9 (1), 3 p. ⟨10.21083/ibol.v9i1.5726⟩. ⟨hal-02613360⟩

Antoine Branca, Bruno Le Ru, Paul-André Calatayud, Julius Obonyo, Boaz Musyoka, et al.. Relative Influence of Host, Wolbachia, Geography and Climate on the Genetic Structure of the Sub-saharan Parasitic Wasp Cotesia sesamiae. Frontiers in Ecology and Evolution, Frontiers Media S.A, 2019, 7, pp.309. ⟨10.3389/fevo.2019.00309⟩. ⟨hal-03097078⟩

Jérémy Gauthier, Philippe Gayral, Bruno Pierre Le Ru, Severine Jancek, Stéphane Dupas, et al.. Genetic footprints of adaptive divergence in the bracovirus of Cotesia sesamiae identified by targeted resequencing. Molecular Ecology, Wiley, 2018, 27 (8), pp.2109-2123. ⟨10.1111/mec.14574⟩. ⟨hal-02140574⟩

Jérémy Gauthier, Jean-Michel Drezen, Elisabeth A. Herniou. The recurrent domestication of viruses: major evolutionary transitions in parasitic wasps. Parasitology, Cambridge University Press (CUP), 2018, 145 (6), pp.713-723. ⟨10.1017/S0031182017000725⟩. ⟨hal-02140632⟩

Diane Bigot, Célestine Atyame Nten, Mylene Weill, Fabienne Justy, Elisabeth A. Herniou, et al.. Discovery of Culex pipiens associated tunisia virus: a new ssRNA(+) virus representing a new insect associated virus family. Virus Evolution, Oxford University Press, 2018, 4 (1), pp.vex040. ⟨10.1093/ve/vex040⟩. ⟨hal-01943945⟩

Robert Harrison, Elisabeth A. Herniou, Johannes Jehle, David Theilmann, John Burand, et al.. ICTV Virus Taxonomy Profile: Baculoviridae. Journal of General Virology, Microbiology Society, 2018, 99 (9), pp.1185-1186. ⟨10.1099/jgv.0.001107⟩. ⟨hal-02140724⟩

Julien Thézé, Carlos Lopez-Vaamonde, Jenny Cory, Elisabeth A. Herniou. Biodiversity, Evolution and Ecological Specialization of Baculoviruses: A Treasure Trove for Future Applied Research. Viruses, MDPI, 2018, 10 (7), pp.366. ⟨10.3390/v10070366⟩. ⟨hal-02140538⟩

Matthieu Leobold, Annie Bézier, Apolline Pichon, Elisabeth A Herniou, Anne-Nathalie Volkoff, et al.. The domestication of a large DNA virus by the wasp Venturia canescens involves targeted genome reduction through pseudogenization. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2018, 10 (7), pp.1745-1764. ⟨10.1093/gbe/evy127⟩. ⟨hal-01918050⟩

Diane Bigot, Anne Dalmon, Bronwen Roy, Chunsheng Hou, Michèle Germain, et al.. The discovery of Halictivirus resolves the Sinaivirus phylogeny. Journal of General Virology, Microbiology Society, 2017, 98 (11), pp.2864-2875. ⟨10.1099/jgv.0.000957⟩. ⟨hal-02140702⟩

Annie Bézier, Grégoire Harichaux, Karine Musset, Valérie Labas, Elisabeth A. Herniou. Qualitative proteomic analysis of Tipula oleracea nudivirus occlusion bodies. Journal of General Virology, Microbiology Society, 2017, 98 (2), pp.284-295. ⟨10.1099/jgv.0.000661⟩. ⟨hal-01595093⟩

J. Drezen, J. Gauthier, T. Josse, A. Bezier, E. Herniou, et al.. Foreign DNA acquisition by invertebrate genomes. Journal of Invertebrate Pathology, Elsevier, 2017, 147, pp.157 - 168. ⟨10.1016/j.jip.2016.09.004⟩. ⟨hal-01738185⟩

Jean-Michel Drezen, Thibaut Josse, Annie Bézier, Jérémy Gauthier, Elisabeth Huguet, et al.. Impact of Lateral Transfers on the Genomes of Lepidoptera. Genes, MDPI, 2017, 8 (11), pp.315. ⟨10.3390/genes8110315⟩. ⟨hal-02138988⟩

Jean-Michel Drezen, Matthieu Leobold, Annie Bézier, Elisabeth Huguet, Anne Nathalie Volkoff, et al.. Endogenous viruses of parasitic wasps: variations on a common theme. Current Opinion in Virology, Elsevier, 2017, 25, pp.41-48. ⟨10.1016/j.coviro.2017.07.002⟩. ⟨hal-01605633⟩

Clément Gilbert, Jean Peccoud, Aurélien Chateigner, Bouziane Moumen, Richard Cordaux, et al.. Continuous Influx of Genetic Material from Host to Virus Populations.. PLoS Genetics, Public Library of Science, 2016, 12 (2), pp.e1005838. ⟨10.1371/journal.pgen.1005838⟩. ⟨hal-01266766⟩

Matthew T. Wayland, Jouni K. Vainio, David Gibson, Elisabeth A Herniou, Timothy J. Littlewood, et al.. The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. Zookeys, Pensoft, 2015, 26 (484), pp.25-52. ⟨10.3897/zookeys.484.9132⟩. ⟨hal-01318819⟩

Julien Thézé, Jun Takatsuka, Madoka Nakai, Basil Arif, Elisabeth Herniou. Gene acquisition convergence between entomopoxviruses and baculoviruses. Viruses, MDPI, 2015, 7 (4), pp.1960-1974. ⟨10.3390/v7041960⟩. ⟨hal-02637094⟩

Aurélien Chateigner, Annie Bézier, Carole Labrousse, Davy Jiolle, Valérie Barbe, et al.. Ultra Deep Sequencing of a Baculovirus Population Reveals Widespread Genomic Variations. Viruses, MDPI, 2015, 7 (7), pp.3625-3646. ⟨10.3390/v7072788⟩. ⟨hal-01315534⟩

Catherine Béliveau, Cohen Alejandro, Stewart Don, Georges Périquet, Djoumad Abdelmadjid, et al.. Genomic and proteomic analyses indicate that banchine and campoplegine polydnaviruses have similar, if not identical, viral ancestors. Journal of Virology, American Society for Microbiology, 2015, 89 (17), pp.8909-8921. ⟨10.1128/JVI.01001-15⟩. ⟨hal-01315371⟩

Laure Kaiser, Bruno Pierre Le Ru, Ferial Kaoula, Corentin Paillusson, Claire Capdevielle-Dulac, et al.. Ongoing ecological speciation in Cotesia sesamiae, a biological control agent of cereal stem borers. Evolutionary Applications, Blackwell, 2015, 8 (8), pp.807-820. ⟨10.1111/eva.12260⟩. ⟨hal-01316567⟩

Clément Gilbert, Aurélien Chateigner, Lise Ernenwein, Valérie Barbe, Annie Bézier, et al.. Population genomics supports baculoviruses as vectors of horizontal transfer of insect transposons.. Nature Communications, Nature Publishing Group, 2014, 5, pp.3348. ⟨10.1038/ncomms4348⟩. ⟨hal-00955963⟩

Annie Bezier, Julien Thézé, Frédérick F. Gavory, Julien Gaillard, Julie Poulain, et al.. The genome of the nucleopolyhedrosis-causing virus from Tipula oleracea sheds new light on the nudiviridae family. Journal of Virology, American Society for Microbiology, 2014, 89 (6), pp.3008-3025. ⟨10.1128/JVI.02884-14⟩. ⟨hal-01315465⟩

Julien Thézé, Oihana Cabodevilla, Leopoldo Palma, Trevor Williams, Primitivo Caballero, et al.. Genomic diversity in European Spodoptera exigua multiple nucleopolyhedrovirus isolates. Journal of General Virology, Microbiology Society, 2014, 95 (10), pp.2297-2309. ⟨10.1099/vir.0.064766-0⟩. ⟨hal-01313729⟩

Julien Thézé, Jun Takatsuka, Zhen Li, Julie Gallais, Daniel Doucet, et al.. New Insights into the Evolution of Entomopoxvirinae from the Complete Genome Sequences of Four Entomopoxviruses Infecting Adoxophyes honmai, Choristoneura biennis, Choristoneura rosaceana, and Mythimna separata. Journal of Virology, American Society for Microbiology, 2013, 87 (14), pp.7992-8003. ⟨10.1128/JVI.00453-13⟩. ⟨hal-00862167⟩

Elisabeth A. Herniou, Elisabeth Huguet, Julien Thézé, Annie Bézier, Georges Périquet, et al.. When parasitic wasps hijacked viruses: genomic and functional evolution of polydnaviruses. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences (1934–1990), Royal Society, The, 2013, 368 (1626), pp.20130051. ⟨10.1098/rstb.2013.0051⟩. ⟨hal-00864019⟩

Annie Bézier, Faustine Louis, Séverine Jancek, Georges Périquet, Julien Thézé, et al.. Functional endogenous viral elements in the genome of the parasitoid wasp Cotesia congregata: insights into the evolutionary dynamics of bracoviruses. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences (1934–1990), Royal Society, The, 2013, 368 (1626), pp.20130047. ⟨10.1098/rstb.2013.0047⟩. ⟨hal-00862670⟩

Séverine Jancek, Annie Bézier, Philippe Gayral, Corentin Paillusson, Laure Kaiser, et al.. Adaptive Selection on Bracovirus Genomes Drives the Specialization of Cotesia Parasitoid Wasps. PLoS ONE, Public Library of Science, 2013, 8 (5), pp.e64432. ⟨10.1371/journal.pone.0064432⟩. ⟨hal-00866210⟩

Isobel Eyres, Eftychios Frangedakis, Diego Fontaneto, Elisabeth A. Herniou, Chiara Boschetti, et al.. Multiple functionally divergent and conserved copies of alpha tubulin in bdelloid rotifers. BMC Evolutionary Biology, BioMed Central, 2012, 12, pp.1471-2148/12/148. ⟨10.1186/1471-2148-12-148⟩. ⟨hal-00769177⟩

Julien Thézé, A. Bezier, Georges Périquet, J.-M. Drezen, Elisabeth A. Herniou. Paleozoic origin of insect large dsDNA viruses. Proceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences, 2011, 108 (38), pp.15931-15935. ⟨10.1073/pnas.1105580108⟩. ⟨hal-02649399⟩

Murat Kaya, Elisabeth A. Herniou, Timothy G. Barraclough, Diego Fontaneto. Inconsistent estimates of diversity between traditional and DNA taxonomy in bdelloid rotifers. Organisms Diversity & Evolution, 2009, 9, pp.3-12. ⟨10.1016/j.ode.2008.10.002⟩. ⟨hal-00412281⟩

Murat Kaya, Elisabeth A. Herniou, Timothy G. Barraclough, Diego Fontaneto. A faunistic survey of bdelloid rotifers in Turkey. Zoology in the Middle East, Taylor and Francis, 2009, 48, pp.114-116. ⟨hal-00450063⟩

Diego Fontaneto, Murat Kaya, Elisabeth A. Herniou, Timothy G. Barraclough. Extreme levels of hidden diversity in microscopic animals (Rotifera) revealed by DNA taxonomy. Molecular Phylogenetics and Evolution, Elsevier, 2009, 53, pp.182-189. ⟨10.1016/j.ympev.2009.04.011⟩. ⟨hal-00412420⟩

Anne Dalmon, Philippe Gayral, Damien Decante, Christophe C. Klopp, Diane Bigot, et al.. The invasive hornet Vespa velutina carries both honey bee viruses and new viruses. 52nd Annual Meeting of the Society for Invertebrate Pathology, 2021, Valencia, Spain. ⟨hal-03526230⟩

Lucas Sire, Paul Schmidt yáñez, Annie Bézier, Béatrice Courtial, yves Mbedi, et al.. Non-Destructive DNA metabarcoding of insects for forest biomonitoring. 6ème colloque du GDR de Génomique Environnementale – conférence "Environmental and Agronomical Genomics 2021 symposium", Oct 2021, Tours, France. ⟨hal-03655983⟩

Lucas Sire, Paul Schmidt yáñez, Diego Fontaneto, Christophe Bouget, Rodolphe Rougerie, et al.. Insect response to climate-induced tree die-offs in the French Pyrenees. Journées Scientifiques Annuelles des sites INRAE du Loiret, Nov 2020, Orléans, France. ⟨hal-03655945⟩

Anne Dalmon, Philippe Gayral, Damien Decante, Christophe C. Klopp, Diane Bigot, et al.. The invasive hornet Vespa velutina carries both honey bee viruses and new viruses. 30ème Congrès UIEIS - Insectes Sociaux - Section Française, Aug 2019, Avignon, France. ⟨hal-02788783⟩

Lucas Sire, Paul Schmidt yáñez, Diego Fontaneto, C. Bouget, Rodolphe Rougerie, et al.. CLIMTREE: Quantifying changes in flying insect diversity and soil fauna along a gradient of climate induced forest decline using DNA metabarcoding. 5ème colloque du GDR de Génomique Environnementale, Oct 2019, La Rochelle, France. ⟨hal-03655943⟩

Paul Schmidt yanez, Rodolphe Rougerie, Annie Bézier, Béatrice Courtial, Christophe Bouget, et al.. DNA Metabarcoding to quantify the ecological impact of climate-induced forest diebacks in the Pyrenees. 8. International Barcode of Life Conference (iBOL), Jun 2019, Trondheim, Norway. 16 p. ⟨hal-02787654⟩

Lucas Sire, Paul Schmidt yáñez, Rodolphe Rougerie, Annie Bézier, Béatrice Courtial, et al.. DNA metabarcoding to quantify the ecological impact of forest decline on flying insect diversity in the Pyrenees. 8th International Barcode of Life Conference, Jun 2019, Trondheim, Norway. ⟨hal-03655928⟩

Lucas Sire, Rodolphe Rougerie, Laurent Larrieu, Annie Bézier, Béatrice Courtial, et al.. DNA Metabarcoding to quantify the response of insect diversity to mountain forest die-offs in the French Pyrenees. International Conference on Ecological Sciences (Sfécologie 2018), Oct 2018, Rennes, France. 825 p. ⟨hal-02736320⟩

Lucas Sire, Rodolphe Rougerie, Christophe Bouget, Laurent L. Larrieu, Béatrice Courtial, et al.. Impact écologique du dépérissement forestier et des coupes sanitaires sur les communautés d’insectes dans les Pyrénées Françaises. 12èmes Conférence du Groupe des Entomologistes Forestiers Francophones, Sep 2018, Houffalize, Belgium. ⟨hal-03655915⟩

Lucas Sire, Delphine Gey, Thierry Noblecourt, Fabien Soldati, Thomas Barnouin, et al.. Next-generation sequencing of Natural History Museum collections to enhance the DNA barcode database of European saproxylic beetles. 10th Symposium on the Conservation of Saproxylic Beetles, Jun 2018, Sankt Oswald, Germany. ⟨hal-03655916⟩

Anne-Nathalie Volkoff, Jean-Michel Drezen, Matthieu Leobold, Annie Bezier, Véronique Jouan, et al.. Recurrent virus domestication in parasitic wasps. 10. ESEB European Society for Evolutionary Biology, Aug 2018, Montpellier, France. ⟨hal-01988636⟩

Paul Schmidt yáñez, Michael T. Monaghan, Christophe Bouget, Douglas yu, Diego Fontaneto, et al.. The CLIMTREE Project: Ecological and socioeconomic impacts of climate-induced tree diebacks in highland forests. 2nd International Conference on Forests, Apr 2017, Neuschönau, Germany. ⟨hal-03655836⟩

Michel Cusson, Catherine Béliveau, A. Cohen, D. Steward, Georges Périquet, et al.. On the evolutionary origins of banchinae polydnaviruses. 25. International Congress of Entomology (ICE 2016), 2016, Orlando, Florida, United States. ⟨hal-01991466⟩

Anne Dalmon, Diane Bigot, Elisabeth Herniou, Nicolas Galtier, Philippe Gayral. Diversité et évolution du Lake Sinaï Virus (LSV) chez les abeilles domestiques et les hyménoptères sauvages. Réunion annuelle du REID (Réseau National Ecologie des Interactions Durables), Mar 2016, Poitiers, France. ⟨hal-02738617⟩

Elisabeth A. Herniou, Julien Thézé, Jennifer Cory, Carlos Lopez-Vaamonde. Diversity, species delimitation, and evolution of insect viruses. 6. International Barcode of Life Conference Barcodes to Biomes, Aug 2015, Guelph, Canada. 141 p., ⟨10.1139/gen-2015-0087⟩. ⟨hal-02743562⟩

Jean-Michel Drezen, Annie Bezier, Apolline Pichon, Véronique Jouan, Georges Périquet, et al.. Recurrent domestication of viruses by parasitic wasps to face host immune defenses. 10. European Congress of Entomology (ECE 2014), 2014, York, United Kingdom. ⟨hal-01991479⟩

Chloe Martin, Annie Bézier, Elisabeth A. Herniou, Christophe Bouget, Guilhem Parmain, et al.. Metabarcoding body remains sieved from tree hollow wood mould to characterize forest insects. 6ème colloque du GDR de Génomique Environnementale – conférence "Environmental and Agronomical Genomics 2021 symposium", Sep 2021, Tours, France. ⟨hal-03655990⟩

L. Sire, Rodolphe Rougerie, Christophe Bouget, Laurent L. Larrieu, Béatrice Courtial, et al.. Quantifying the impact of tree-diebacks and salvage logging on mountain forest biodiversity using metabarcoding. 4ème colloque de Génomique Environnementale, Sep 2017, Marseille, France. pp.1, 2017. ⟨hal-02606506⟩

Lucas Sire, Rodolphe Rougerie, Laurent Larrieu, Christophe Bouget, Béatrice Courtial, et al.. Quantifying the impact of tree-diebacksand salvage logging on mountain forest biodiversity using metabarcoding. 4. Colloque de Génomique Environnementale, Sep 2017, Marseille, France. 1 p., 2017. ⟨hal-02788069⟩

Lucas Sire, Rodolphe Rougerie, Christophe Bouget, Laurent L. Larrieu, Béatrice Courtial, et al.. Quantifying the impact of tree-die backs and salvage logging on mountain forest biodiversity using metabarcoding. 4ème colloque de Génomique Environnementale, Sep 2017, Marseille, France. ⟨hal-03655791⟩

Annie Bézier, Grégoire Harichaux, Julien Gaillard, Karine Musset, Valérie Labas, et al.. Proteomic analysis of the occluded Tipula oleracea nudivirus (ToNV). 47. Annual Meeting of the Society for Invertebrate Pathology, Aug 2014, Mainz, Germany. 176 p., 2014, 47th Annual Meeting of the Society for Invertebrate Pathology and International Congress on Invertebrate Pathology and Microbial Control. ⟨hal-02739880⟩

Jean-Michel Drezen, Elisabeth A. Herniou, Annie Bézier. Evolutionary Progenitors of Bracoviruses. Parasitoid Viruses Symbionts and Pathogens, Elsevier, pp.15-31, 2012, 978-0-12-384858-1. ⟨10.1016/B978-0-12-384858-1.00002-3⟩. ⟨hal-00780036⟩

Elisabeth A. Herniou, B.M. Arif, J.J. Becnel, G.W Blissard, B. Bonning, et al.. OE Family Baculoviridae. Elsevier Academic Press. Virus Taxonomy: Ninth Report of the International Committee on Taxonomy of Viruses, AE King Ed., pp.163-173, 2011. ⟨hal-00659568⟩

Timothy G. Barraclough, Diego Fontaneto, Elisabeth A. Herniou, Claudia Ricci. The evolutionary nature of diversification in sexuals and asexuals. Cambridge University Press. Speciation and Patterns of Diversity, Roger K. Butlin, Jon R. Bridle and Dolph Schulter, pp.29-45, 2009. ⟨hal-00412458⟩

Elisabeth A. Herniou. Insect Molecular Virology: Advances and Emerging Trends.. 2020, pp.547. ⟨hal-03010507⟩

Lucas Sire, Paul Schmidt yáñez, Cai Wang, Annie Bézier, Béatrice Courtial, et al.. Climate-induced forest dieback drives compositional change in insect communities that is concentrated amongst rare species. 2021. ⟨hal-03206694⟩

Jérémy Gauthier, Hélène Boulain, Joke J.F.A. van Vugt, Lyam Baudry, Emma Persyn, et al.. Chromosomal resolution reveals symbiotic virus colonization of parasitic wasp genomes. 2020. ⟨hal-03090838⟩