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ARTICLE RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis

Heike Lange , Simon y A Ndecky , Carlos Gomez-Diaz , David Pflieger , Nicolas Butel , et al.
Nature Communications, 2019, 10, pp.1-12. ⟨10.1038/s41467-019-11807-4⟩
Article dans une revue hal-02378293v1
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The TUTase URT1 connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis

Hélène Scheer , Caroline de Almeida , Emilie Ferrier , Quentin Simonnot , Laure Poirier , et al.
Nature Communications, 2021, 12 (1), ⟨10.1038/s41467-021-21382-2⟩
Article dans une revue hal-03160098v1
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The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana

Heike Lange , Hélène Zuber , François M. Sement , Johanna Chicher , Lauriane Kuhn , et al.
PLoS Genetics, 2014, 10 (8), pp.e1004564. ⟨10.1371/journal.pgen.1004564⟩
Article dans une revue hal-01197631v1
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Catalytic activities, molecular connections, and biological functions of plant RNA exosome complexes

Heike Lange , Dominique Gagliardi
The Plant Cell, 2021, 34 (3), pp.967-988. ⟨10.1093/plcell/koab310⟩
Article dans une revue hal-03797888v1

RNA uridylation and decay in plants

Caroline de Almeida , Hélène Scheer , Anthony Gobert , Veronica Fileccia , Federico Martinelli , et al.
Philosophical Transactions of the Royal Society B: Biological Sciences, 2018, 373 (1762), pp.20180163-20180163. ⟨10.1098/rstb.2018.0163⟩
Article dans une revue hal-02342533v1
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Respective Contributions of URT1 and HESO1 to the Uridylation of 5′ Fragments Produced From RISC-Cleaved mRNAs

Hélène Zuber , Hélène Scheer , Anne-Caroline Joly , Dominique Gagliardi
Frontiers in Plant Science, 2018, 9, pp.1438. ⟨10.3389/fpls.2018.01438⟩
Article dans une revue hal-02296204v1
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The zinc-finger protein SOP1 is required for a subset of the nuclear exosome functions in Arabidopsis.

K Hématy , Y Bellec , R Podicheti , N Bouteiller , P Anne , et al.
PLoS Genetics, 2016, 12 (2)
Article dans une revue hal-02189763v1
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RNA degradation by the plant RNA exosome involves both phosphorolytic and hydrolytic activities

Natalia Sikorska , Hélène Zuber , Anthony Gobert , Heike Lange , Dominique Gagliardi
Nature Communications, 2017, 8, pp.2162-2162. ⟨10.1038/s41467-017-02066-2⟩
Article dans une revue hal-02271508v1
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The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis

Kian Hématy , Yannick Bellec , Ram Podicheti , Nathalie Bouteiller , Pauline Anne , et al.
PLoS Genetics, 2016, 12 (2), pp.e1005817. ⟨10.1371/journal.pgen.1005817⟩
Article dans une revue hal-01266346v1
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SERRATE interacts with the nuclear exosome targeting (NEXT) complex to degrade primary miRNA precursors in Arabidopsis

Mateusz Bajczyk , Heike Lange , Dawid Bielewicz , Lukasz Szewc , Susheel s Bhat , et al.
Nucleic Acids Research, 2020, 48 (12), pp.6839 - 6854. ⟨10.1093/nar/gkaa373⟩
Article dans une revue hal-02882622v1
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Molecular connection between the TUTase URT1 and decapping activators

Hélène Scheer , Caroline de Almeida , Emilie Ferrier , Laure Poirier , David Pflieger , et al.
2020
Pré-publication, Document de travail hal-02996423v1
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Cell-type-specific control of secondary cell wall formation by Musashi-type translational regulators in Arabidopsis

Alicia Kairouani , Dominique Pontier , Claire Picart , Fabien Mounet , Yves Martinez , et al.
eLife, 2023, 12, ⟨10.7554/eLife.88207⟩
Article dans une revue hal-04230426v1

Uridylation Earmarks mRNAs for Degradation… and More

Hélène Scheer , Hélène Zuber , Caroline de Almeida , Dominique Gagliardi
Trends in Genetics, 2016, 32 (10), pp.607-619. ⟨10.1016/j.tig.2016.08.003⟩
Article dans une revue hal-02302883v1
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High-Resolution Mapping of 3' Extremities of RNA Exosome Substrates by 3' RACE-Seq.

Hélène Scheer , Caroline de Almeida , Natalia Sikorska , Sandrine Koechler , Dominique Gagliardi , et al.
Methods in molecular biology (Clifton, N.J.), 2062, 2020, ⟨10.1007/978-1-4939-9822-7_8⟩
Chapitre d'ouvrage hal-02882621v1
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Uridylation and PABP cooperate to repair mRNA deadenylated ends in Arabidopsis.

Hélène Zuber , Hélène Scheer , Emilie Ferrier , Francois Sement , P Mercier , et al.
Cell Reports, 2016, 14 (11), pp.2707-2717. ⟨10.1016/j.celrep.2016.02.060⟩
Article dans une revue hal-02185924v1

A NYN domain protein directly interacts with DCP1 and is required for phyllotactic pattern in Arabidopsis.

Marlene Schiaffini , Clara Chicois , Aude Pouclet , Tiphaine Chartier , Elodie Ubrig , et al.
2021
Pré-publication, Document de travail hal-03365240v1
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An extensive survey of phytoviral RNA 3’ uridylation identifies extreme variations and virus-specific patterns

Anne-Caroline Joly , Shahinez Garcia , Jean-Michel Hily , Sandrine Koechler , Gérard Demangeat , et al.
Plant Physiology, 2023, ⟨10.1093/plphys/kiad278⟩
Article dans une revue hal-04122949v1

Plant Exosomes and Cofactors

Heike Lange , Dominique Gagliardi
Eukaryotic RNases and their Partners in RNA Degradation and Biogenesis, Part A,The Enzymes,, pp.31-52, 2012, ⟨10.1016/b978-0-12-404740-2.00002-1⟩
Chapitre d'ouvrage hal-03035449v1

5′ and 3′ modifications controlling RNA degradation: from safeguards to executioners

Dominique Gagliardi , Andrzej Dziembowski
Philosophical Transactions of the Royal Society B: Biological Sciences, 2018, 373 (1762), ⟨10.1098/rstb.2018.0160⟩
Article dans une revue hal-01935843v1
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RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis

Heike Lange , Simon Ndecky , C Gomez-Diaz , David Pflieger , Nicolas Butel , et al.
2019
Pré-publication, Document de travail hal-02350131v1
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A NYN domain protein directly interacts with DECAPPING1 and is required for phyllotactic pattern

Marlène Schiaffini , Clara Chicois , Aude Pouclet , Tiphaine Chartier , Elodie Ubrig , et al.
Plant Physiology, 2021
Article dans une revue hal-03515915v1
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Catalytic activities, molecular connections, and biological functions of plant RNA exosome complexes

Heike Lange , Dominique Gagliardi
The Plant cell, 2022
Article dans une revue hal-03704478v1
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No-go decay as a novel route to restrict viral infection in plants

Aude Pouclet , Dominique Gagliardi , Damien Garcia
Molecular Plant, 2023, ⟨10.1016/j.molp.2023.02.001⟩
Article dans une revue hal-03981682v1